---
phase: 14-documentation-content-refinement-and-quality-pass
plan: "01"
subsystem: documentation
tags: [docs, configuration, troubleshooting, audit-fix]
dependency_graph:
  requires: []
  provides: [source-verified-configuration-reference, ZTLCTL_DOCS_PATH-docs, INT-01-fix, FLOW-01-fix]
  affects: [docs/configuration.md, docs/troubleshooting.md, docs/guide/index.md]
tech_stack:
  added: []
  patterns: [source-verified-docs, sparse-toml-contract]
key_files:
  created: []
  modified:
    - docs/configuration.md
    - docs/troubleshooting.md
    - docs/guide/index.md
decisions:
  - configuration.md rewritten from models.py source of truth — all 12 config sections documented with field tables
  - "[plugins.git] confirmed as correct TOML key (not top-level [git]) — verified via PluginsConfig model"
  - "WorkflowConfig defaults corrected: template='claude-driven', skill_set='research' (not empty strings as plan stated)"
  - ZTLCTL_DOCS_PATH documented in both configuration.md and troubleshooting.md with cross-links
metrics:
  duration_minutes: 3
  completed_date: "2026-03-20"
  tasks_completed: 3
  files_modified: 3
---

# Phase 14 Plan 01: Audit Gap Fixes and Configuration Reference Summary

Rewrote configuration.md from models.py source, added two troubleshooting entries (ZTLCTL_DOCS_PATH and GitHub Pages source), and fixed the missing Built-in Plugins row in guide/index.md — closing all three known audit gaps (INT-01, FLOW-01, ZTLCTL_DOCS_PATH).

## What Was Done

### Task 1: Rewrite configuration.md (b49372e)

Complete source-verified rewrite of `docs/configuration.md`. Read every Pydantic model class in `src/ztlctl/config/models.py` and documented every field with type, default, and description.

Key fixes:
- Replaced incorrect top-level `[git]` section with `[plugins.git]` (verified via `PluginsConfig` model — git config lives under `plugins.git` dict field)
- Added `[tags]` section (`auto_register: bool = True`)
- Added `[workflow]` section (`template`, `skill_set` fields)
- Added missing `[agent.context]` fields: `layer_0_min` (500), `layer_1_min` (1000)
- Added missing `[search]` fields: `semantic_enabled` (false), `embedding_model` ("local"), `embedding_dim` (384)
- Added missing `[session]` field: `orphan_reweave_threshold` (0.2)
- Added `ZTLCTL_DOCS_PATH` environment variable section
- Expanded from 96 to 533 lines with field tables, real-world examples, and complete defaults

### Task 2: Troubleshooting entries (2d7a6f6)

Added two new entries to `docs/troubleshooting.md`:
- "ztlctl docs search returns 'docs path not found'" — with `ZTLCTL_DOCS_PATH` fix and cross-link to configuration.md
- "GitHub Pages not updating after deploy" — with GitHub Actions source setting steps

File grew from 108 to 134 lines.

### Task 3: guide/index.md Built-in Plugins row (33959db)

Added the Built-in Plugins row to the "In This Guide" table in `docs/guide/index.md`, linking to `../plugins.md` with description "Git and Reweave plugin guides — config, triggers, and scenarios". Closes INT-01.

## Deviations from Plan

### Minor Source Discrepancy (Auto-noted)

**Found during:** Task 1 inspection of `WorkflowConfig`

**Issue:** The plan specified `template: str = ""` and `skill_set: str = ""` as WorkflowConfig defaults. Actual source shows `template: str = "claude-driven"` and `skill_set: str = "research"`.

**Fix:** Used the actual source values in documentation — source of truth is models.py, not the plan's stated values.

**Files modified:** `docs/configuration.md`

### Line Count Variance (Task 2)

**Found during:** Task 2 verification

**Issue:** Plan acceptance criteria said "file >= 140 lines" (estimated ~33 lines of new content). Actual additions were 26 lines (134 total vs 107 original). All substantive acceptance criteria pass — only the line-count estimate was slightly off.

**Impact:** None — all functional content is present and correct.

## Audit Gaps Closed

| Gap ID | Description | Fix | File |
|--------|-------------|-----|------|
| INT-01 | Missing Built-in Plugins row in guide/index.md | Added table row | `docs/guide/index.md` |
| FLOW-01 | Missing GitHub Pages source setting docs | Added troubleshooting entry | `docs/troubleshooting.md` |
| ZTLCTL_DOCS_PATH | Missing ZTLCTL_DOCS_PATH docs | Added to both configuration.md and troubleshooting.md | Both files |

## Self-Check: PASSED

All files verified present. All commits verified in git log:
- b49372e — docs/configuration.md Task 1
- 2d7a6f6 — docs/troubleshooting.md Task 2
- 33959db — docs/guide/index.md Task 3
