CHANGELOG.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.en.md
README.md
pyproject.toml
pytest.ini
setup.py
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/.no_exist/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/adapter_config.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/.no_exist/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/added_tokens.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/README.md
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/config.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/config_sentence_transformers.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/modules.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/sentence_bert_config.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/special_tokens_map.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/tokenizer.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/tokenizer_config.json
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/vocab.txt
data/embeddings_cache/models/models--sentence-transformers--all-MiniLM-L6-v2/snapshots/c9745ed1d9f207416be6d2e6f8de32d1f16199bf/1_Pooling/config.json
docs/ARCHITECTURE_UPDATE_SUMMARY.md
docs/DOCUMENTATION_CLEANUP_PLAN.md
docs/DOCUMENTATION_INDEX.md
docs/DOCUMENTATION_INTEGRATION_SUMMARY.md
docs/DOCUMENTATION_OPTIMIZATION_SUMMARY.md
docs/DOCUMENTATION_STATUS_SUMMARY.md
docs/DOCUMENTATION_STRUCTURE_FINAL.md
docs/FILE_ORGANIZATION_SUMMARY.md
docs/LAYERS_DOCUMENTATION_SUMMARY.md
docs/PROJECT_STATUS_REPORT_2024_12_19.md
docs/PROJECT_STATUS_REPORT_2025_08_24.md
docs/PROJECT_STATUS_REPORT_2025_08_25.md
docs/README.md
docs/SUBMODULE_SETUP_GUIDE.md
docs/ai_setup/01_project_overview.md
docs/ai_setup/02_current_status.md
docs/ai_setup/03_next_tasks.md
docs/ai_setup/04_ai_context_template.md
docs/ai_setup/README.md
docs/application_layer/README.md
docs/application_layer/api_gateway.md
docs/application_layer/application_layer.md
docs/application_layer/task_queue.md
docs/architecture/01_fundamental_concepts.md
docs/architecture/02_architecture_overview.md
docs/architecture/03_design_principles.md
docs/architecture/04_agent_execution_flow.md
docs/architecture/05_infrastructure_layer.md
docs/architecture/06_adapter_layer.md
docs/architecture/07_framework_abstraction_layer.md
docs/architecture/08_cognitive_architecture_layer.md
docs/architecture/09_intelligent_context_layer.md
docs/architecture/10_a2a_protocol_integration.md
docs/architecture/10_business_capability_layer.md
docs/architecture/11_application_layer.md
docs/architecture/12_devx_layer.md
docs/architecture/13_core_architecture_recommendations.md
docs/architecture/README.md
docs/architecture/architecture_diagrams.md
docs/architecture/zeus_8layer_interaction_analysis.md
docs/cli/README.md
docs/guides/BUSINESS_LAYER_DESIGN.md
docs/guides/DOCUMENT_TEMPLATE.md
docs/guides/QUICK_START_GUIDE.md
docs/guides/README.md
docs/implementation/A2A_PROTOCOL_ARCHITECTURE_INTEGRATION_COMPLETE.md
docs/implementation/AUTOGEN_ADAPTER_TESTING_STRATEGY.md
docs/implementation/ENHANCED_RAG_SYSTEM_IMPLEMENTATION.md
docs/implementation/INTELLIGENT_CONTEXT_LAYER_COMPLETE_IMPLEMENTATION.md
docs/implementation/INTELLIGENT_CONTEXT_LAYER_IMPLEMENTATION.md
docs/implementation/LANGGRAPH_ADAPTER_IMPLEMENTATION_COMPLETE.md
docs/implementation/LAYER_COMMUNICATION_INTEGRATION.md
docs/implementation/README.md
docs/implementation/UNIFIED_AGENT_FRAMEWORK.md
docs/layers/README.md
docs/layers/adapter_layer/README.md
docs/layers/adapter_layer/autogen_adapter.md
docs/layers/adapter_layer/crewai_adapter.md
docs/layers/adapter_layer/langchain_adapter.md
docs/layers/application_orchestration_layer/README.md
docs/layers/business_capability_layer/README.md
docs/layers/business_capability_layer/TESTING_PLAN.md
docs/layers/business_capability_layer/TESTING_SUMMARY.md
docs/layers/business_capability_layer/business_capabilities.md
docs/layers/business_capability_layer/business_capability_layer.md
docs/layers/business_capability_layer/capability_definition_model.md
docs/layers/business_capability_layer/capability_registry.md
docs/layers/business_capability_layer/domain_knowledge_base.md
docs/layers/business_capability_layer/workflow_engine.md
docs/layers/cognitive_architecture_layer/README.md
docs/layers/cognitive_architecture_layer/cognitive_architecture.md
docs/layers/cognitive_architecture_layer/cognitive_architecture_layer.md
docs/layers/cognitive_architecture_layer/cognitive_core.md
docs/layers/cognitive_architecture_layer/execution_engine.md
docs/layers/cognitive_architecture_layer/learning_engine.md
docs/layers/cognitive_architecture_layer/perception_engine.md
docs/layers/cognitive_architecture_layer/persona_manager.md
docs/layers/cognitive_architecture_layer/planner.md
docs/layers/cognitive_architecture_layer/reasoning_engine.md
docs/layers/cognitive_architecture_layer/understanding_engine.md
docs/layers/context_layer/README.md
docs/layers/context_layer/context_layer.md
docs/layers/context_layer/conversation_history.md
docs/layers/context_layer/knowledge_graph.md
docs/layers/context_layer/memory_system.md
docs/layers/context_layer/rag_system.md
docs/layers/development_experience_layer/README.md
docs/layers/development_experience_layer/cli_tool.md
docs/layers/development_experience_layer/debugging_tools.md
docs/layers/development_experience_layer/development_experience.md
docs/layers/development_experience_layer/development_experience_layer.md
docs/layers/development_experience_layer/observability_stack.md
docs/layers/development_experience_layer/sdk.md
docs/layers/development_experience_layer/testing_framework.md
docs/layers/framework_abstraction_layer/README.md
docs/layers/framework_abstraction_layer/core_interfaces.md
docs/layers/framework_abstraction_layer/factory_classes.md
docs/layers/framework_abstraction_layer/manager_classes.md
docs/layers/infrastructure_layer/README.md
docs/layers/infrastructure_layer/configuration_management.md
docs/layers/infrastructure_layer/logging_system.md
docs/plans/end_to_end_test_plan.md
docs/project/ARCHITECTURE_DESIGN.md
docs/project/DEVELOPMENT_ROADMAP.md
docs/project/PROGRESS_UPDATE_2025_08_23.md
docs/project/PROJECT_STATUS_REPORT.md
docs/project/README.md
docs/project/implementation_roadmap.md
docs/ref/README.md
docs/reports/APPLICATION_ORCHESTRATION_PROGRESS_REPORT.md
docs/reports/WEB_TEST_REPORT.md
docs/reports/cognitive_business_progress_report.md
docs/reports/fpga_expert_agent_design_complete.md
docs/reports/progress_update_report.md
docs/requirements/fpga_agent_requirements.md
docs/requirements/fpga_expert_agent_design.md
examples/a2a_protocol_demo.py
examples/advanced_fusion_demo.py
examples/advanced_knowledge_demo.py
examples/agentic_knowledge_demo.py
examples/agentic_rag_demo.py
examples/application_orchestration_demo.py
examples/autogen_adapter_demo.py
examples/autogen_simple_demo.py
examples/automated_evaluation_demo.py
examples/basic_bridge_demo.py
examples/business_layer_demo.py
examples/cognitive_agent_demo.py
examples/complete_agent_demo.py
examples/deepseek_demo.py
examples/development_experience_demo.py
examples/document_to_knowledge_demo.py
examples/enhanced_cognitive_demo.py
examples/enhanced_routing_demo.py
examples/integrated_layer_communication_demo.py
examples/knowledge_service_demo.py
examples/knowledge_system_demo.py
examples/langgraph_adapter_demo.py
examples/langgraph_simple_demo.py
examples/layer_communication_demo.py
examples/new_architecture_demo.py
examples/openai_complete_demo.py
examples/openai_demo.py
examples/openai_focus_demo.py
examples/prompt_engineering_demo.py
examples/rag_demo.py
examples/rag_simple_demo.py
examples/reinforcement_learning_demo.py
examples/semantic_cache_demo.py
examples/simple_layer_communication_demo.py
layers/__init__.py
layers/adapter/__init__.py
layers/adapter/base.py
layers/adapter/communication_manager.py
layers/adapter/autogen/__init__.py
layers/adapter/autogen/adapter.py
layers/adapter/autogen/adapter_simple.py
layers/adapter/autogen/llm_backend.py
layers/adapter/langgraph/__init__.py
layers/adapter/langgraph/adapter.py
layers/adapter/langgraph/adapter_simple.py
layers/adapter/openai/__init__.py
layers/adapter/openai/adapter.py
layers/adapter/openai/agent_wrapper.py
layers/adapter/registry/adapter_registry.py
layers/application/__init__.py
layers/application/communication_manager.py
layers/application/cli/__init__.py
layers/application/cli/agent_factory.py
layers/application/cli/commands.py
layers/application/cli/commands_backup.py
layers/application/cli/enhanced_commands.py
layers/application/cli/enhanced_interactive.py
layers/application/cli/interactive.py
layers/application/cli/main.py
layers/application/orchestration/__init__.py
layers/application/orchestration/lifecycle_manager.py
layers/application/orchestration/load_balancer.py
layers/application/orchestration/orchestrator.py
layers/application/orchestration/service_registry.py
layers/application/web/api_docs_generator.py
layers/application/web/web_manager.py
layers/application/web/backend/main.py
layers/application/web/frontend/adc-web/node_modules/flatted/python/flatted.py
layers/application/web/frontend/adc-web/node_modules/shell-quote/print.py
layers/business/__init__.py
layers/business/communication_manager.py
layers/business/project.py
layers/business/teams/collaboration_manager.py
layers/business/teams/team_engine.py
layers/business/workflows/workflow.py
layers/business/workflows/workflow_engine.py
layers/cognitive/__init__.py
layers/cognitive/cognitive_agent.py
layers/cognitive/communication.py
layers/cognitive/communication_manager.py
layers/cognitive/knowledge_based_agent.py
layers/cognitive/learning.py
layers/cognitive/memory.py
layers/cognitive/memory_persistence.py
layers/cognitive/perception.py
layers/cognitive/planning.py
layers/cognitive/reasoning.py
layers/cognitive/self_learning_knowledge_manager.py
layers/framework/__init__.py
layers/framework/communication_manager.py
layers/framework/abstractions/__init__.py
layers/framework/abstractions/a2a_integration.py
layers/framework/abstractions/a2a_protocol.py
layers/framework/abstractions/agent.py
layers/framework/abstractions/agent_factory.py
layers/framework/abstractions/agent_factory_manager.py
layers/framework/abstractions/cognitive_agent.py
layers/framework/abstractions/context.py
layers/framework/abstractions/decorators.py
layers/framework/abstractions/knowledge_based_agent.py
layers/framework/abstractions/layer_communication.py
layers/framework/abstractions/result.py
layers/framework/abstractions/task.py
layers/framework/abstractions/team.py
layers/framework/context_engineering/__init__.py
layers/framework/context_engineering/context_manager.py
layers/framework/context_engineering/context_orchestrator.py
layers/framework/knowledge_base/hybrid_knowledge_manager.py
layers/framework/prompt_engineering/__init__.py
layers/framework/prompt_engineering/enhanced_prompt_manager.py
layers/framework/prompt_engineering/prompt_analyzer.py
layers/framework/prompt_engineering/prompt_converter.py
layers/framework/prompt_engineering/prompt_manager.py
layers/framework/prompt_engineering/prompt_optimizer.py
layers/framework/prompt_engineering/prompt_template.py
layers/infrastructure/__init__.py
layers/infrastructure/communication_manager.py
layers/infrastructure/cache/__init__.py
layers/infrastructure/cache/cache_manager.py
layers/infrastructure/config/__init__.py
layers/infrastructure/config/config_manager.py
layers/infrastructure/config/yaml_config_manager.py
layers/infrastructure/llm/__init__.py
layers/infrastructure/llm/client_manager.py
layers/infrastructure/llm/providers/__init__.py
layers/infrastructure/llm/providers/base.py
layers/infrastructure/llm/providers/deepseek.py
layers/infrastructure/llm/providers/openai.py
layers/infrastructure/logging/__init__.py
layers/infrastructure/logging/logger.py
layers/infrastructure/performance/monitor.py
layers/infrastructure/security/security_manager.py
layers/intelligent_context/__init__.py
layers/intelligent_context/advanced_fusion_strategies.py
layers/intelligent_context/advanced_knowledge_manager.py
layers/intelligent_context/agentic_rag_system.py
layers/intelligent_context/automated_evaluation_framework.py
layers/intelligent_context/context_engineering.py
layers/intelligent_context/document_knowledge_processor.py
layers/intelligent_context/embedding_service.py
layers/intelligent_context/enhanced_knowledge_router.py
layers/intelligent_context/enhanced_knowledge_router_with_cache.py
layers/intelligent_context/fpga_specialized_router.py
layers/intelligent_context/integrated_knowledge_service.py
layers/intelligent_context/intelligent_cache_strategy.py
layers/intelligent_context/intelligent_context_layer.py
layers/intelligent_context/knowledge_builder.py
layers/intelligent_context/knowledge_management.py
layers/intelligent_context/knowledge_router.py
layers/intelligent_context/quality_control.py
layers/intelligent_context/rag_system.py
layers/intelligent_context/reinforcement_learning_router.py
layers/intelligent_context/semantic_cache.py
layers/intelligent_context/vector_database_service.py
lib/__init__.py
scripts/build_knowledge_base.py
scripts/build_package.py
scripts/publish_to_pypi.py
scripts/query_knowledge_base.py
scripts/quick_build.sh
scripts/setup.sh
tests/TESTING_IMPROVEMENT_SUMMARY.md
tests/__init__.py
tests/conftest.py
tests/e2e/test_chat_with_mock.py
tests/e2e/test_e2e_simple.py
tests/e2e/test_real_chat.py
tests/e2e/test_real_e2e.py
tests/integration/__init__.py
tests/integration/conftest.py
tests/integration/test_autogen_comprehensive.py
tests/integration/test_business_layer_integration.py
tests/integration/test_cli_to_business.py
tests/integration/test_intelligent_context_integration.py
tests/integration/test_layer_communication.py
tests/integration/test_vector_db_embedding.py
tests/integration/test_workflow_integration.py
tests/performance/test_business_layer_performance.py
tests/unit/test_intelligent_context_layer.py
tests/unit/test_intelligent_context_simple.py
tests/unit/test_simple_intelligent_context.py
tests/unit/adapter/test_autogen_adapter.py
tests/unit/adapter/test_deepseek_adapter.py
tests/unit/adapter/test_langgraph_adapter.py
tests/unit/adapter/test_llm_backend.py
tests/unit/application/__init__.py
tests/unit/application/test_application_orchestrator.py
tests/unit/application/test_cli.py
tests/unit/business/__init__.py
tests/unit/business/test_collaboration_manager.py
tests/unit/business/test_collaboration_manager_fixed.py
tests/unit/business/test_project.py
tests/unit/business/test_team_manager.py
tests/unit/business/test_workflow_engine.py
tests/unit/cognitive/__init__.py
tests/unit/cognitive/test_memory.py
tests/unit/cognitive/test_perception.py
tests/unit/cognitive/test_reasoning.py
tests/unit/framework/__init__.py
tests/unit/framework/test_a2a_integration.py
tests/unit/framework/test_a2a_protocol.py
tests/unit/framework/test_agent_factory_manager.py
tests/unit/framework/test_cognitive_agent.py
tests/unit/framework/test_integration.py
tests/unit/framework/test_layer_communication.py
tests/unit/framework/test_team.py
tests/unit/framework/test_universal_agent.py
tests/unit/framework/test_universal_context.py
tests/unit/framework/test_universal_result.py
tests/unit/framework/test_universal_task.py
tests/unit/infrastructure/__init__.py
tests/unit/infrastructure/test_config_manager.py
tests/unit/intelligent_context/test_agentic_rag_system.py
tests/unit/intelligent_context/test_context_engineering.py
tests/unit/intelligent_context/test_intelligent_context_layer.py
tests/unit/intelligent_context/test_knowledge_management.py
tests/unit/intelligent_context/test_quality_control.py
tests/unit/intelligent_context/test_rag_system.py
tests/utils/test_data_factory.py
zeus/__init__.py
zeus/cli.py
zeus/agents/__init__.py