Metadata-Version: 2.1
Name: zdb-analysis
Version: 0.1.2
Summary: Pandas + Z inv analysis
Home-page: UNKNOWN
Author: Shane Breeze
Author-email: sdb15@ic.ac.uk
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: Topic :: Utilities
Classifier: Development Status :: 3 - Alpha
Description-Content-Type: text/markdown
Requires-Dist: future (>=0.17.1)
Requires-Dist: numexpr (>=2.6.9)
Requires-Dist: numpy (>=1.16.2)
Requires-Dist: oyaml (>=0.8)
Requires-Dist: pandas (>=0.24.2)
Requires-Dist: pysge (>=0.1.1)
Requires-Dist: conpy (>=0.1.0)
Requires-Dist: PyYAML (>=4.2b1)
Requires-Dist: tables (>=3.5.1)
Requires-Dist: tqdm (>=4.31.1)

# Z invisible DB analysis

Setup with

```
source setup.sh
```

To run the analysis use `zdb_analyse.py`:

```
usage: zdb_analyse.py [-h] [-m MODE] [-j NCORES] [--sge-opts SGE_OPTS]
                      [-n NFILES] [-o OUTPUT]
                      config

positional arguments:
  config                Path to yaml file

optional arguments:
  -h, --help            show this help message and exit
  -m MODE, --mode MODE  Parallelisation: 'multiprocessing', 'sge', 'htcondor'
  -j NCORES, --ncores NCORES
                        Number of cores for 'multiprocessing' jobs
  --sge-opts SGE_OPTS   Options to pass onto qsub
  -n NFILES, --nfiles NFILES
                        Number of files to process. -1 = all
  -o OUTPUT, --output OUTPUT
                        Output file

```


