@ARTICLE{yt,
       author = {{Turk}, Matthew J. and {Smith}, Britton D. and {Oishi}, Jeffrey S. and
         {Skory}, Stephen and {Skillman}, Samuel W. and {Abel}, Tom and
         {Norman}, Michael L.},
        title = "{yt: A Multi-code Analysis Toolkit for Astrophysical Simulation Data}",
      journal = {\apjs},
     keywords = {cosmology: theory, methods: data analysis, methods: numerical, Astrophysics - Instrumentation and Methods for Astrophysics, Astrophysics - Cosmology and Nongalactic Astrophysics},
         year = "2011",
        month = "Jan",
       volume = {192},
       number = {1},
          eid = {9},
        pages = {9},
          doi = {10.1088/0067-0049/192/1/9},
archivePrefix = {arXiv},
       eprint = {1011.3514},
 primaryClass = {astro-ph.IM},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2011ApJS..192....9T},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@misc{ytree,
  author       = {Britton Smith and
                  Meagan Lang},
  title        = {ytree: merger-tree toolkit},
  month        = feb,
  year         = 2018,
  doi          = {10.5281/zenodo.1174374},
  url          = {https://doi.org/10.5281/zenodo.1174374}
}

@ARTICLE{numpy,
       author = {{van der Walt}, St{\'e}fan and {Colbert}, S. Chris and
         {Varoquaux}, Ga{\"e}l},
        title = "{The NumPy Array: A Structure for Efficient Numerical Computation}",
      journal = {Computing in Science and Engineering},
     keywords = {Computer Science - Mathematical Software},
         year = "2011",
        month = "Mar",
       volume = {13},
       number = {2},
        pages = {22-30},
          doi = {10.1109/MCSE.2011.37},
archivePrefix = {arXiv},
       eprint = {1102.1523},
 primaryClass = {cs.MS},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2011CSE....13b..22V},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@article{unyt,
  doi = {10.21105/joss.00809},
  url = {https://doi.org/10.21105/joss.00809},
  year  = {2018},
  month = {aug},
  publisher = {The Open Journal},
  volume = {3},
  number = {28},
  pages = {809},
  author = {Nathan J. Goldbaum and John A. ZuHone and Matthew J. Turk and Kacper Kowalik and Anna L. Rosen},
  title = {unyt: Handle,  manipulate,  and convert data with units in Python},
  journal = {Journal of Open Source Software}
}

@misc{pydot,
 author = {Pydot},
 title = {Pydot},
 year = {2008},
 publisher = {GitHub},
 journal = {GitHub repository},
 howpublished = {\url{https://github.com/pydot/pydot}}
}

@ARTICLE{graphviz,
    author = {Emden R. Gansner and Stephen C. North},
    title = {An open graph visualization system and its applications to software engineering},
    journal = {SOFTWARE - PRACTICE AND EXPERIENCE},
    year = {2000},
    volume = {30},
    number = {11},
    pages = {1203--1233},
    doi = {10.1002/1097-024X(200009)30:11<1203::AID-SPE338>3.0.CO;2-N}
}

@Book{h5py,
  keywords = {python, hdf5},
  year = {2013},
  publisher = {O'Reilly},
  title = {Python and HDF5},
  author = {Andrew Collette}
}

@ARTICLE{ctrees,
   author = {{Behroozi}, P.~S. and {Wechsler}, R.~H. and {Wu}, H.-Y. and
	{Busha}, M.~T. and {Klypin}, A.~A. and {Primack}, J.~R.},
    title = "{Gravitationally Consistent Halo Catalogs and Merger Trees for Precision Cosmology}",
  journal = {\apj},
archivePrefix = "arXiv",
   eprint = {1110.4370},
 primaryClass = "astro-ph.CO",
 keywords = {dark matter, galaxies: abundances, galaxies: evolution, methods: numerical },
     year = 2013,
    month = jan,
   volume = 763,
      eid = {18},
    pages = {18},
      doi = {10.1088/0004-637X/763/1/18},
   adsurl = {http://adsabs.harvard.edu/abs/2013ApJ...763...18B},
  adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@ARTICLE{cote2018,
       author = {{C{\^o}t{\'e}}, Benoit and {Silvia}, Devin W. and {O'Shea}, Brian W. and
         {Smith}, Britton and {Wise}, John H.},
        title = "{Validating Semi-analytic Models of High-redshift Galaxy Formation Using Radiation Hydrodynamical Simulations}",
      journal = {\apj},
     keywords = {galaxies: formation, galaxies: high redshift, galaxies: star formation, stars: abundances, Astrophysics - Astrophysics of Galaxies},
         year = "2018",
        month = "May",
       volume = {859},
       number = {1},
          eid = {67},
        pages = {67},
          doi = {10.3847/1538-4357/aabe8f},
archivePrefix = {arXiv},
       eprint = {1710.06442},
 primaryClass = {astro-ph.GA},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2018ApJ...859...67C},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@ARTICLE{hummels2019,
       author = {{Hummels}, Cameron B. and {Smith}, Britton D. and {Hopkins}, Philip F. and
         {O{\textquoteright}Shea}, Brian W. and {Silvia}, Devin W. and
         {Werk}, Jessica K. and {Lehner}, Nicolas and {Wise}, John H. and
         {Collins}, David C. and {Butsky}, Iryna S.},
        title = "{The Impact of Enhanced Halo Resolution on the Simulated Circumgalactic Medium}",
      journal = {\apj},
     keywords = {cosmology: theory, galaxies: evolution, hydrodynamics, methods: numerical, quasars: absorption lines, Astrophysics - Astrophysics of Galaxies},
         year = "2019",
        month = "Sep",
       volume = {882},
       number = {2},
          eid = {156},
        pages = {156},
          doi = {10.3847/1538-4357/ab378f},
archivePrefix = {arXiv},
       eprint = {1811.12410},
 primaryClass = {astro-ph.GA},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2019ApJ...882..156H},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@ARTICLE{smith2018,
       author = {{Smith}, Britton D. and {Regan}, John A. and {Downes}, Turlough P. and
         {Norman}, Michael L. and {O'Shea}, Brian W. and {Wise}, John H.},
        title = "{The growth of black holes from Population III remnants in the Renaissance simulations}",
      journal = {\mnras},
     keywords = {methods: numerical, cosmology: theory, Astrophysics - Astrophysics of Galaxies},
         year = "2018",
        month = "Nov",
       volume = {480},
       number = {3},
        pages = {3762-3773},
          doi = {10.1093/mnras/sty2103},
archivePrefix = {arXiv},
       eprint = {1804.06477},
 primaryClass = {astro-ph.GA},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2018MNRAS.480.3762S},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

@ARTICLE{garrisonkimmel2019,
       author = {{Garrison-Kimmel}, Shea and {Wetzel}, Andrew and {Hopkins}, Philip F. and
         {Sanderson}, Robyn and {El-Badry}, Kareem and {Graus}, Andrew and
         {Chan}, T.~K. and {Feldmann}, Robert and {Boylan-Kolchin}, Michael and
         {Hayward}, Christopher C. and {Bullock}, James S. and {Fitts}, Alex and
         {Samuel}, Jenna and {Wheeler}, Coral and {Kere{\v{s}}}, Du{\v{s}}an and
         {Faucher-Gigu{\`e}re}, Claude-Andr{\'e}},
        title = "{Star formation histories of dwarf galaxies in the FIRE simulations: dependence on mass and Local Group environment}",
      journal = {\mnras},
     keywords = {galaxies: dwarf, galaxies: formation, Local Group, cosmology: theory, Astrophysics - Astrophysics of Galaxies},
         year = "2019",
        month = "Nov",
       volume = {489},
       number = {4},
        pages = {4574-4588},
          doi = {10.1093/mnras/stz2507},
archivePrefix = {arXiv},
       eprint = {1903.10515},
 primaryClass = {astro-ph.GA},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2019MNRAS.489.4574G},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
