LICENSE
README.md
pyproject.toml
setup.py
xron/__init__.py
xron/_version.py
xron/entry.py
xron/gen_conf.py
xron/nn.py
xron/test_VQVAE_speech.py
xron/watch_training_progress.py
xron/xron_annotate.py
xron/xron_eval.py
xron/xron_init.py
xron/xron_input.py
xron/xron_label.py
xron/xron_model.py
xron/xron_rcnn_train.py
xron/xron_test.py
xron/xron_train.py
xron/xron_train_base.py
xron/xron_train_embedding.py
xron/xron_train_supervised.py
xron/xron_train_variational.py
xron.egg-info/PKG-INFO
xron.egg-info/SOURCES.txt
xron.egg-info/dependency_links.txt
xron.egg-info/entry_points.txt
xron.egg-info/requires.txt
xron.egg-info/top_level.txt
xron/nrhmm/__init__.py
xron/nrhmm/hmm.py
xron/nrhmm/hmm_eval.py
xron/nrhmm/hmm_input.py
xron/nrhmm/hmm_relabel.py
xron/nrhmm/hmm_test.py
xron/nrhmm/hmm_train.py
xron/nrhmm/hybrid_data.py
xron/nrhmm/kmer2seq.py
xron/nrhmm/method_illustration.py
xron/nrhmm/prepare_data.py
xron/nrhmm/profile.py
xron/nrhmm/relabel_test.py
xron/nrhmm/split_chunks.py
xron/nrhmm/tandem_repeat_resquiggle.py
xron/nrhmm/transition_speed_test.py
xron/utils/__init__.py
xron/utils/align.py
xron/utils/conformer.py
xron/utils/data_sanity_check.py
xron/utils/dataset_visualization.py
xron/utils/easy_assembler.py
xron/utils/extract_m6a_segment.py
xron/utils/extract_seqs.py
xron/utils/fast5_op.py
xron/utils/fastIO.py
xron/utils/gt_coordinates.py
xron/utils/hidden_plot.py
xron/utils/index.py
xron/utils/index_multi.py
xron/utils/merge_datasets.py
xron/utils/merge_signal.py
xron/utils/mm.py
xron/utils/plot_op.py
xron/utils/prepare_chunk.py
xron/utils/seq_op.py
xron/utils/sparse_op.py
xron/utils/tagging.py
xron/utils/transfer_bonito.py
xron/utils/transfer_methylation.py
xron/utils/vq.py