Metadata-Version: 1.1
Name: wopmars
Version: 0.0.3
Summary: Workflow Python Manager for Reproducible Science
Home-page: https://github.com/aitgon/wopmars
Author: Luc Giffon
Author-email: luc.giffon@gmail.com
License: MIT
Download-URL: https://github.com/aitgon/wopmars/archive/0.0.3.tar.gz
Description-Content-Type: UNKNOWN
Description: WopMars: Workflow Python Manager for Reproducible Science
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        .. image:: https://travis-ci.org/aitgon/wopmars.svg?branch=master
            :target: https://travis-ci.org/aitgon/wopmars
        
        .. image:: https://img.shields.io/pypi/pyversions/wopmars.svg
            :target: https://www.python.org
        
        .. image:: https://readthedocs.org/projects/wopmars/badge/?version=latest
            :target: http://wopmars.readthedocs.io/en/latest/?badge=latest
        
        .. image:: https://img.shields.io/pypi/v/wopmars.svg
            :target: https://pypi.python.org/pypi/wopmarst
        
        WopMars is a database-driven workflow manager written in python similar to GNU Makefile or Snakemake. The originality of WopMars is that it is closely connected to a relational database and can take database tables as inputs and outputs in the definition file. WopMars uses SQLAlchemy object relational mapper (ORM) and has been currently tested with SQLite, MariaDB/MySQL and PostgreSQL.
        
        
        Installation
        --------------
        
        To install wopmars, you have to get the sources on the git repository and then go to the source directory and type::
        
            pip install .
        
        To install wopmars with the --dot option to generate workflow schemes::
        
            pip install .[pygraphviz]
        
        Documentation
        -------------
        
        The `WopMars documentation <http://wopmars.readthedocs.org/>`_ with user guide and
        API reference is hosted at Read The Docs.
        
        
Keywords: workflow manager python object-oriented reproducible science database framework
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Database :: Front-Ends
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Software Development
