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configs/inference/inference.yaml
configs/inference/inference_mif.yaml
configs/inference/inference_xenium.yaml
configs/inference/inference_xenium_he.yaml
configs/inference/inference_xenium_qptiff.yaml
configs/jobs/job.yaml
configs/jobs/job_gan.yaml
configs/training/config_fold1.yaml
configs/training/config_fold11.yaml
configs/training/config_fold12.yaml
configs/training/config_fold13.yaml
configs/training/config_fold2.yaml
configs/training/config_fold21.yaml
configs/training/config_fold22.yaml
configs/training/config_fold23.yaml
configs/training/config_fold24.yaml
configs/training/config_fold25.yaml
configs/training/config_fold26.yaml
configs/training/config_fold27.yaml
configs/training/config_fold28.yaml
configs/training/config_fold29.yaml
configs/training/config_fold3.yaml
configs/training/config_fold30.yaml
configs/training/config_fold31.yaml
configs/training/config_fold32.yaml
configs/training/config_fold33.yaml
configs/training/config_fold4.yaml
configs/training/config_fold5.yaml
configs/training/config_fold6.yaml
configs/training/newmethod.yaml
dataset/Histopathology_Datasets_Summary.xlsx
dataset/__init__.py
dataset/augmentation.py
dataset/config.py
dataset/dataset.py
dataset/hv_generator.py
dataset/utils.py
dataset/~$Histopathology_Datasets_Summary.xlsx
dataset/__pycache__/__init__.cpython-311.pyc
dataset/__pycache__/augmentation.cpython-311.pyc
dataset/__pycache__/config.cpython-311.pyc
dataset/__pycache__/dataset.cpython-311.pyc
dataset/__pycache__/hv_generator.cpython-311.pyc
dataset/__pycache__/utils.cpython-311.pyc
docs/.DS_Store
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docs/figures/mdanderson_logo.png
docs/figures/vitaminp_ncr.png
docs/figures/vitaminp_overview.png
metrics/__init__.py
metrics/instance.py
metrics/segmentation.py
metrics/utils.py
metrics/__pycache__/__init__.cpython-311.pyc
metrics/__pycache__/instance.cpython-311.pyc
metrics/__pycache__/segmentation.cpython-311.pyc
metrics/__pycache__/utils.cpython-311.pyc
postprocessing/__init__.py
postprocessing/hv_postprocess.py
postprocessing/utils.py
postprocessing/__pycache__/__init__.cpython-311.pyc
postprocessing/__pycache__/hv_postprocess.cpython-311.pyc
postprocessing/__pycache__/utils.cpython-311.pyc
scripts/run_wsi_inference.py
scripts/train copy.py
scripts/train.py
scripts/train_gan.py
vitaminp/.DS_Store
vitaminp/__init__.py
vitaminp/backbone.py
vitaminp/blocks.py
vitaminp/evaluator.py
vitaminp/losses.py
vitaminp/models.py
vitaminp/models_bk.py
vitaminp/pretrained.py
vitaminp/trainer.py
vitaminp/trainer_bk.py
vitaminp/utils.py
vitaminp.egg-info/PKG-INFO
vitaminp.egg-info/SOURCES.txt
vitaminp.egg-info/dependency_links.txt
vitaminp.egg-info/requires.txt
vitaminp.egg-info/top_level.txt
vitaminp/__pycache__/__init__.cpython-311.pyc
vitaminp/__pycache__/backbone.cpython-311.pyc
vitaminp/__pycache__/blocks.cpython-311.pyc
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vitaminp/__pycache__/losses.cpython-311.pyc
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vitaminp/__pycache__/pretrained.cpython-311.pyc
vitaminp/__pycache__/trainer.cpython-311.pyc
vitaminp/__pycache__/utils.cpython-311.pyc
vitaminp/gan/__init__.py
vitaminp/gan/augmentations.py
vitaminp/gan/losses.py
vitaminp/gan/models.py
vitaminp/gan/syns_mif.py
vitaminp/gan/trainer.py
vitaminp/gan/utils.py
vitaminp/gan/__pycache__/__init__.cpython-311.pyc
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vitaminp/inference/.DS_Store
vitaminp/inference/__init__.py
vitaminp/inference/channel_config.py
vitaminp/inference/constrained_watershed.py
vitaminp/inference/overlap_cleaner.py
vitaminp/inference/postprocessing.py
vitaminp/inference/predictor.py
vitaminp/inference/tile_processor.py
vitaminp/inference/utils.py
vitaminp/inference/wsi_handler.py
vitaminp/inference/__pycache__/__init__.cpython-311.pyc
vitaminp/inference/__pycache__/channel_config.cpython-311.pyc
vitaminp/inference/__pycache__/constrained_watershed.cpython-311.pyc
vitaminp/inference/__pycache__/overlap_cleaner.cpython-311.pyc
vitaminp/inference/__pycache__/postprocessing.cpython-311.pyc
vitaminp/inference/__pycache__/predictor.cpython-311.pyc
vitaminp/inference/__pycache__/tile_processor.cpython-311.pyc
vitaminp/inference/__pycache__/utils.cpython-311.pyc
vitaminp/inference/__pycache__/wsi_handler.cpython-311.pyc
vitaminp/postprocessing/__init__.py
vitaminp/postprocessing/hv_postprocess.py
vitaminp/postprocessing/utils.py
vitaminp/postprocessing/__pycache__/__init__.cpython-311.pyc
vitaminp/postprocessing/__pycache__/hv_postprocess.cpython-311.pyc
vitaminp/postprocessing/__pycache__/utils.cpython-311.pyc