MANIFEST.in
README.rst
setup.py
data/10x_pooled_400.mat
data/BranchedSynDat.mat
data/GSE60361_dat.mat
data/SCDE_k2_sup.mat
data/SCDE_test.mat
data/SynMouseESprog_1000.mat
tests/test_cluster.py
tests/test_cluster_sparse.py
tests/test_dim_reduce.py
tests/test_ensemble.py
tests/test_experiment_runner.py
tests/test_fit_dist.py
tests/test_gap_score.py
tests/test_lineage.py
tests/test_nb.py
tests/test_nb_state_estimation.py
tests/test_nmf.py
tests/test_poisson.py
tests/test_preprocessing.py
tests/test_qual2quant.py
tests/test_real_data.py
tests/test_sparse_utils.py
tests/test_state_estimation.py
tests/test_state_estimation_sparse.py
tests/test_zip_state_estimation.py
uncurl/__init__.py
uncurl/clustering.py
uncurl/clusters_estimation.py
uncurl/dimensionality_reduction.py
uncurl/ensemble.py
uncurl/evaluation.py
uncurl/experiment_runner.py
uncurl/fit_dist.pyx
uncurl/fit_dist_data.py
uncurl/gap_score.py
uncurl/glm_nmf.py
uncurl/gradient.pyx
uncurl/lightlda_utils.py
uncurl/lineage.py
uncurl/nb_clustering.py
uncurl/nb_state_estimation.py
uncurl/nmf_wrapper.py
uncurl/nolips.c
uncurl/nolips.pyx
uncurl/nolips_parallel.c
uncurl/nolips_parallel.pyx
uncurl/plda_utils.py
uncurl/pois_ll.py
uncurl/preprocessing.py
uncurl/qual2quant.py
uncurl/run_se.py
uncurl/sampling.py
uncurl/sgd.pyx
uncurl/simulation.py
uncurl/sparse_utils.c
uncurl/sparse_utils.pyx
uncurl/state_estimation.py
uncurl/vis.py
uncurl/zi_nb_state_estimation.py
uncurl/zip_clustering.py
uncurl/zip_state_estimation.py
uncurl/zip_utils.py
uncurl_seq.egg-info/PKG-INFO
uncurl_seq.egg-info/SOURCES.txt
uncurl_seq.egg-info/dependency_links.txt
uncurl_seq.egg-info/not-zip-safe
uncurl_seq.egg-info/requires.txt
uncurl_seq.egg-info/top_level.txt