attrs
codecov
coverage
flake8
numpy
six
tqdm
humanize
daiquiri
msprime >= 1.0.0
tskit >= 0.5.3
zarr!=2.11.0, !=2.11.1, !=2.11.2
lmdb
pytest
pytest-xdist
pytest-coverage
# Only for giving nice error messages for incompatible older files
h5py
# Only needed for the Python implementation.
sortedcontainers
# Optional extras for debugging threads - these modules mainly work on linux
python-prctl; sys_platform == 'linux'
numa; sys_platform == 'linux'
# Needed for building docs.
sphinx
sphinx-argparse
sphinx_rtd_theme
setuptools>=45
setuptools_scm
cyvcf2
# Needed for evaluation script.
pandas
matplotlib
seaborn
colorama

