MANIFEST.in
README.md
setup.py
tRNAnalysis.egg-info/PKG-INFO
tRNAnalysis.egg-info/SOURCES.txt
tRNAnalysis.egg-info/dependency_links.txt
tRNAnalysis.egg-info/entry_points.txt
tRNAnalysis.egg-info/not-zip-safe
tRNAnalysis.egg-info/top_level.txt
trnanalysis/ModuleTrna.py
trnanalysis/__init__.py
trnanalysis/entry.py
trnanalysis/pipeline_trna.py
trnanalysis/version.py
trnanalysis/R/CoveragePlot.R
trnanalysis/Rmarkdown/Clustering.Rmd
trnanalysis/Rmarkdown/DE.Rmd
trnanalysis/Rmarkdown/QC_alignment.Rmd
trnanalysis/Rmarkdown/QC_report.Rmd
trnanalysis/Rmarkdown/Report.dir.Rproj
trnanalysis/Rmarkdown/_site.yml
trnanalysis/Rmarkdown/_site.yml~
trnanalysis/Rmarkdown/functions.R
trnanalysis/Rmarkdown/index.Rmd
trnanalysis/Rmarkdown/meta_data.csv
trnanalysis/Rmarkdown/tRNA-coverage.Rmd
trnanalysis/Rmarkdown/trna_analysis.Rmd
trnanalysis/pipeline_trna/meta_data.csv
trnanalysis/pipeline_trna/pipeline.yml
trnanalysis/python/addCCA.py
trnanalysis/python/modBed12.py
trnanalysis/python/tRNAscan2bed12.py
trnanalysis/python/trna_cluster.py
trnanalysis/python/trna_end_site.py
trnanalysis/python/trna_fragment_bed.py
trnanalysis/python/trna_keep_mature.py