LICENSE
MANIFEST.in
README.rst
setup.cfg
setup.py
transposonmapper/__init__.py
transposonmapper/__version__.py
transposonmapper/transposonmapper.py
transposonmapper/utils.py
transposonmapper.egg-info/PKG-INFO
transposonmapper.egg-info/SOURCES.txt
transposonmapper.egg-info/dependency_links.txt
transposonmapper.egg-info/requires.txt
transposonmapper.egg-info/top_level.txt
transposonmapper/data_files/Cerevisiae_AllEssentialGenes_List.txt
transposonmapper/data_files/S288C_reference_sequence_R64-2-1_20150113.fsa
transposonmapper/data_files/SGD_features.README
transposonmapper/data_files/SGD_features.tab
transposonmapper/data_files/Saccharomyces_cerevisiae.R64-1-1.99.gff3
transposonmapper/data_files/Yeast_Protein_Names.txt
transposonmapper/exporting/__init__.py
transposonmapper/exporting/save_as_bed.py
transposonmapper/exporting/save_as_wig.py
transposonmapper/exporting/save_per_gene.py
transposonmapper/exporting/save_per_gene_insertions.py
transposonmapper/importing/__init__.py
transposonmapper/importing/load_default_files.py
transposonmapper/importing/read_genes.py
transposonmapper/importing/verify_data_files.py
transposonmapper/mapping/__init__.py
transposonmapper/mapping/concatenate_chromosomes.py
transposonmapper/mapping/correct_read_position.py
transposonmapper/mapping/find_chromosome_reads.py
transposonmapper/mapping/get_insertions_and_reads.py
transposonmapper/mapping/get_reads.py
transposonmapper/mapping/samflag.py
transposonmapper/plotting/__init__.py
transposonmapper/plotting/dna_features_plot.py
transposonmapper/plotting/profile_genome_plot.py
transposonmapper/processing/__init__.py
transposonmapper/processing/chromosome_names_in_files.py
transposonmapper/processing/clean_bedwigfiles.py
transposonmapper/processing/dna_features_helpers.py
transposonmapper/processing/essential_genes_names.py
transposonmapper/processing/genomicfeatures_dataframe.py
transposonmapper/processing/profileplot_genome_helpers.py
transposonmapper/processing/read_sgdfeatures.py
transposonmapper/processing/transposonread_profileplot_genome.py
transposonmapper/properties/__init__.py
transposonmapper/properties/gene_aliases.py
transposonmapper/properties/get_chromosome_position.py
transposonmapper/properties/get_chromosome_properties.py
transposonmapper/properties/get_coordinates_genes.py
transposonmapper/properties/get_gene_position.py
transposonmapper/properties/list_gene_names.py
transposonmapper/statistics/__init__.py
transposonmapper/statistics/dataframe_from_pergene.py
transposonmapper/statistics/dataframe_from_pergene_helpers.py
transposonmapper/statistics/volcano_helpers.py
transposonmapper/statistics/volcanoplot.py