LICENSE
README.rst
setup.cfg
setup.py
scripts/tramway
scripts/tramway-browse
tramway/__init__.py
tramway/__main__.py
tramway.egg-info/PKG-INFO
tramway.egg-info/SOURCES.txt
tramway.egg-info/dependency_links.txt
tramway.egg-info/requires.txt
tramway.egg-info/top_level.txt
tramway/analyzer/__init__.py
tramway/analyzer/artefact/__init__.py
tramway/analyzer/attribute/__init__.py
tramway/analyzer/attribute/abc.py
tramway/analyzer/browser/__init__.py
tramway/analyzer/env/__init__.py
tramway/analyzer/env/abc.py
tramway/analyzer/env/environments.py
tramway/analyzer/env/ssh.py
tramway/analyzer/images/__init__.py
tramway/analyzer/images/abc.py
tramway/analyzer/images/allsymbols.py
tramway/analyzer/images/draw.py
tramway/analyzer/images/mpl.py
tramway/analyzer/localizer/__init__.py
tramway/analyzer/localizer/abc.py
tramway/analyzer/mapper/__init__.py
tramway/analyzer/mapper/abc.py
tramway/analyzer/mapper/allsymbols.py
tramway/analyzer/mapper/models.py
tramway/analyzer/mapper/mpl.py
tramway/analyzer/mapper/plotly.py
tramway/analyzer/mapper/plugin.py
tramway/analyzer/mapper/utils.py
tramway/analyzer/pipeline/__init__.py
tramway/analyzer/pipeline/stages.py
tramway/analyzer/roi/__init__.py
tramway/analyzer/roi/abc.py
tramway/analyzer/roi/allsymbols.py
tramway/analyzer/roi/collections.py
tramway/analyzer/roi/mpl.py
tramway/analyzer/roi/utils.py
tramway/analyzer/sampler/__init__.py
tramway/analyzer/sampler/abc.py
tramway/analyzer/sampler/allsymbols.py
tramway/analyzer/spt_data/__init__.py
tramway/analyzer/spt_data/abc.py
tramway/analyzer/spt_data/allsymbols.py
tramway/analyzer/spt_data/mpl.py
tramway/analyzer/tesseller/__init__.py
tramway/analyzer/tesseller/abc.py
tramway/analyzer/tesseller/allsymbols.py
tramway/analyzer/tesseller/mpl.py
tramway/analyzer/tesseller/plugin.py
tramway/analyzer/tesseller/proxied.py
tramway/analyzer/tesseller/proxy.py
tramway/analyzer/tesseller/post/__init__.py
tramway/analyzer/tesseller/post/merger.py
tramway/analyzer/time/__init__.py
tramway/analyzer/time/abc.py
tramway/analyzer/time/allsymbols.py
tramway/analyzer/tracker/__init__.py
tramway/analyzer/tracker/abc.py
tramway/analyzer/tracker/allsymbols.py
tramway/core/__init__.py
tramway/core/chain.py
tramway/core/exceptions.py
tramway/core/lazy.py
tramway/core/namedcolumns.py
tramway/core/plugin.py
tramway/core/rc.py
tramway/core/scaler.py
tramway/core/xyt.py
tramway/core/analyses/__init__.py
tramway/core/analyses/abc.py
tramway/core/analyses/auto.py
tramway/core/analyses/base.py
tramway/core/analyses/browser.py
tramway/core/analyses/lazy.py
tramway/core/hdf5/__init__.py
tramway/core/hdf5/compat.py
tramway/core/hdf5/rules.py
tramway/core/hdf5/store.py
tramway/core/parallel/__init__.py
tramway/core/parallel/abc.py
tramway/core/parallel/abc_py2.py
tramway/feature/__init__.py
tramway/feature/adjacency.py
tramway/feature/curl.py
tramway/feature/single_traj/__init__.py
tramway/feature/single_traj/batch_extraction.py
tramway/feature/single_traj/batch_generation.py
tramway/feature/single_traj/distribution.py
tramway/feature/single_traj/misc.py
tramway/feature/single_traj/rw_features.py
tramway/feature/single_traj/rw_misc.py
tramway/feature/single_traj/rw_simulation.py
tramway/feature/single_traj/utils_supervised.py
tramway/feature/single_traj/vae.py
tramway/feature/single_traj/visualization.py
tramway/helper/__init__.py
tramway/helper/animation.py
tramway/helper/base.py
tramway/helper/inference.py
tramway/helper/roi.py
tramway/helper/tessellation.py
tramway/helper/simulation/__init__.py
tramway/helper/simulation/categoricaltrap.py
tramway/helper/simulation/functional.py
tramway/inference/__init__.py
tramway/inference/base.py
tramway/inference/d.py
tramway/inference/d_conj_prior.py
tramway/inference/ddrift.py
tramway/inference/density.py
tramway/inference/df.py
tramway/inference/dv.py
tramway/inference/fast_grad_dv.py
tramway/inference/gradient.py
tramway/inference/optimization.py
tramway/inference/semi_stochastic_dv.py
tramway/inference/snr.py
tramway/inference/spherical_volume.py
tramway/inference/srtesseler_density.py
tramway/inference/standard_d.py
tramway/inference/standard_ddrift.py
tramway/inference/standard_df.py
tramway/inference/stochastic_dv.py
tramway/inference/time.py
tramway/inference/unsmooth_d.py
tramway/inference/unsmooth_ddrift.py
tramway/inference/unsmooth_df.py
tramway/inference/bayes_factors/__init__.py
tramway/inference/bayes_factors/calculate_bayes_factors.py
tramway/inference/bayes_factors/calculate_marginalized_integral.py
tramway/inference/bayes_factors/calculate_posteriors.py
tramway/inference/bayes_factors/convenience_functions.py
tramway/inference/bayes_factors/find_marginalized_zeta_t_roots.py
tramway/inference/bayes_factors/get_D_posterior.py
tramway/inference/bayes_factors/group_by_sign.py
tramway/inference/bayes_factors/stopwatch.py
tramway/inference/bayes_factors/test_calculate_bayes_factor.py
tramway/localization/__init__.py
tramway/localization/UNet/__init__.py
tramway/localization/UNet/inference.py
tramway/localization/UNet/tf.py
tramway/localization/UNet/utility_function_inference.py
tramway/plot/__init__.py
tramway/plot/contour.py
tramway/plot/map.py
tramway/plot/mesh.py
tramway/plot/animation/__init__.py
tramway/plot/animation/map.py
tramway/plot/animation/xyt.py
tramway/plot/bokeh/__init__.py
tramway/plot/bokeh/analyzer.py
tramway/plot/bokeh/map.py
tramway/plot/bokeh/roi.py
tramway/plot/tk/__init__.py
tramway/plot/tk/contour.py
tramway/tessellation/__init__.py
tramway/tessellation/base.py
tramway/tessellation/hexagon.py
tramway/tessellation/kohonen.py
tramway/tessellation/nesting.py
tramway/tessellation/random.py
tramway/tessellation/time.py
tramway/tessellation/utils2d.py
tramway/tessellation/window.py
tramway/tessellation/grid/__init__.py
tramway/tessellation/gwr/__init__.py
tramway/tessellation/gwr/dichotomy.py
tramway/tessellation/gwr/gas.py
tramway/tessellation/gwr/graph/__init__.py
tramway/tessellation/gwr/graph/array.py
tramway/tessellation/gwr/graph/base.py
tramway/tessellation/gwr/graph/dict.py
tramway/tessellation/gwr/graph/exception.py
tramway/tessellation/kdtree/__init__.py
tramway/tessellation/kdtree/dichotomy.py
tramway/tessellation/kmeans/__init__.py
tramway/tracking/__init__.py
tramway/tracking/track_non_track/__init__.py
tramway/tracking/track_non_track/file_processing_loc.py
tramway/tracking/track_non_track/non_tracking_T_0.py
tramway/utils/__init__.py
tramway/utils/contour.py
tramway/utils/crop.py
tramway/utils/deconvolve.py
tramway/utils/inferencemap.py
tramway/utils/mapviz.py
tramway/utils/mean_std.py
tramway/utils/trajviz.py