LICENSE.txt
README.md
pyproject.toml
setup.cfg
toytree/__init__.py
toytree.egg-info/PKG-INFO
toytree.egg-info/SOURCES.txt
toytree.egg-info/dependency_links.txt
toytree.egg-info/entry_points.txt
toytree.egg-info/not-zip-safe
toytree.egg-info/requires.txt
toytree.egg-info/top_level.txt
toytree/annotate/__init__.py
toytree/annotate/src/__init__.py
toytree/annotate/src/add_admixture_edge.py
toytree/annotate/src/add_axes_box_outline.py
toytree/annotate/src/add_color_scale.py
toytree/annotate/src/add_edge_markers.py
toytree/annotate/src/add_node_markers.py
toytree/annotate/src/add_pie_markers.py
toytree/annotate/src/add_scale_bar.py
toytree/annotate/src/add_tip_labels.py
toytree/annotate/src/add_tip_markers.py
toytree/annotate/src/checks.py
toytree/annotate/src/image_api.py
toytree/cli/__init__.py
toytree/cli/main.py
toytree/color/__init__.py
toytree/color/src/__init__.py
toytree/color/src/colorkit.py
toytree/color/src/concat.py
toytree/color/src/toycolor.py
toytree/color/src/utils.py
toytree/core/__init__.py
toytree/core/apis.py
toytree/core/multitree.py
toytree/core/node.py
toytree/core/tree.py
toytree/data/__init__.py
toytree/data/_src/__init__.py
toytree/data/_src/data.py
toytree/data/_src/expand_node_mapping.py
toytree/data/_src/get_node_data.py
toytree/data/_src/set_node_data.py
toytree/distance/__init__.py
toytree/distance/_src/__init__.py
toytree/distance/_src/nodedist.py
toytree/distance/_src/quartet_dist.py
toytree/distance/_src/tree_move_dists.py
toytree/distance/_src/treedist.py
toytree/distance/_src/treedist_sample.py
toytree/distance/_src/treedist_utils.py
toytree/drawing/__init__.py
toytree/drawing/src/__init__.py
toytree/drawing/src/draw_cloudtree.py
toytree/drawing/src/draw_demography.py
toytree/drawing/src/draw_multitree.py
toytree/drawing/src/draw_toytree.py
toytree/drawing/src/mark_annotation.py
toytree/drawing/src/mark_pie.py
toytree/drawing/src/mark_polygon.py
toytree/drawing/src/mark_toytree.py
toytree/drawing/src/render_annotation.py
toytree/drawing/src/render_marker.py
toytree/drawing/src/render_pie.py
toytree/drawing/src/render_text.py
toytree/drawing/src/render_tree.py
toytree/drawing/src/setup_canvas.py
toytree/drawing/src/setup_grid.py
toytree/enum/__init__.py
toytree/enum/src/__init__.py
toytree/enum/src/bipartitions.py
toytree/enum/src/counting.py
toytree/enum/src/edges.py
toytree/enum/src/partitions.py
toytree/enum/src/quadripartitions.py
toytree/enum/src/quartets.py
toytree/enum/src/topologies.py
toytree/infer/__init__.py
toytree/infer/src/__init__.py
toytree/infer/src/consensus.py
toytree/infer/src/distance.py
toytree/infer/src/maxcut.py
toytree/infer/src/maximum_likelihood.py
toytree/infer/src/mul_trees.py
toytree/infer/src/neighbor_joining.py
toytree/infer/src/old_consensus.py
toytree/infer/src/parse_tree_from_table.py
toytree/infer/src/parsimony.py
toytree/infer/src/phylomaker.py
toytree/infer/src/supertrees.py
toytree/infer/src/upgma.py
toytree/io/__init__.py
toytree/io/src/__init__.py
toytree/io/src/helpers.py
toytree/io/src/mtreeio.py
toytree/io/src/newick.py
toytree/io/src/nexus.py
toytree/io/src/parse.py
toytree/io/src/save.py
toytree/io/src/treeio.py
toytree/io/src/utils.py
toytree/io/src/writer.py
toytree/layout/__init__.py
toytree/layout/src/__init__.py
toytree/layout/src/get_edge_midpoints.py
toytree/layout/src/layout_base.py
toytree/layout/src/layout_circular.py
toytree/layout/src/layout_linear.py
toytree/layout/src/layout_tip_angles.py
toytree/layout/src/layout_unrooted.py
toytree/learn/__init__.py
toytree/learn/src/__init__.py
toytree/learn/src/wrightfisher.py
toytree/mod/__init__.py
toytree/mod/_src/__init__.py
toytree/mod/_src/mod_edges.py
toytree/mod/_src/mod_topo.py
toytree/mod/_src/root_funcs.py
toytree/mod/_src/root_unroot.py
toytree/mod/_src/tree_move.py
toytree/mod/_src/penalized_likelihood/__init__.py
toytree/mod/_src/penalized_likelihood/classes.py
toytree/mod/_src/penalized_likelihood/newclass.py
toytree/mod/_src/penalized_likelihood/testing.py
toytree/network/__init__.py
toytree/network/src/__init__.py
toytree/network/src/network.py
toytree/network/src/network_class_exp.py
toytree/network/src/parse_network.py
toytree/pcm/__init__.py
toytree/pcm/src/__init__.py
toytree/pcm/src/api.py
toytree/pcm/src/utils.py
toytree/pcm/src/vcv.py
toytree/pcm/src/diversification/__init__.py
toytree/pcm/src/diversification/blomberg.py
toytree/pcm/src/diversification/diversification.py
toytree/pcm/src/diversification/red.py
toytree/pcm/src/phylocom/__init__.py
toytree/pcm/src/phylocom/metrics.py
toytree/pcm/src/phylocom/phylocom.py
toytree/pcm/src/traits/__init__.py
toytree/pcm/src/traits/continuous_brownian_model.py
toytree/pcm/src/traits/continuous_brownian_sim.py
toytree/pcm/src/traits/discrete_markov_model_fit.py
toytree/pcm/src/traits/discrete_markov_model_sim.py
toytree/pcm/src/traits/discrete_markov_model_sim_old.py
toytree/pcm/src/traits/phylo_anova.py
toytree/pcm/src/traits/phylosignal.py
toytree/pcm/src/traits/stochastic_mapping.py
toytree/rtree/__init__.py
toytree/rtree/_src/__init__.py
toytree/rtree/_src/rtree.py
toytree/style/__init__.py
toytree/style/src/__init__.py
toytree/style/src/map_colors.py
toytree/style/src/map_values.py
toytree/style/src/style_base.py
toytree/style/src/style_types.py
toytree/style/src/validate_data.py
toytree/style/src/validate_edges.py
toytree/style/src/validate_node_labels.py
toytree/style/src/validate_nodes.py
toytree/style/src/validate_style.py
toytree/style/src/validate_tips.py
toytree/style/src/validate_utils.py
toytree/style/tests/__init__.py
toytree/style/tests/test_styles.py
toytree/style/tests/test_validate.py
toytree/style/tests/test_validator.py
toytree/utils/__init__.py
toytree/utils/network.py
toytree/utils/src/__init__.py
toytree/utils/src/browser.py
toytree/utils/src/embedding.py
toytree/utils/src/exceptions.py
toytree/utils/src/globals.py
toytree/utils/src/logger_setup.py
toytree/utils/src/run_r_script.py
toytree/utils/src/scrollable_canvas.py
toytree/utils/src/style_axes.py
toytree/utils/src/toytree_sequence.py
toytree/utils/src/toytree_sequence_drawing.py