LICENSE
README.md
pyproject.toml
src/tooluniverse/__init__.py
src/tooluniverse/_lazy_registry_static.py
src/tooluniverse/addgene_tool.py
src/tooluniverse/admetai_tool.py
src/tooluniverse/agentic_tool.py
src/tooluniverse/allen_brain_tool.py
src/tooluniverse/alliance_genome_tool.py
src/tooluniverse/alphafold_tool.py
src/tooluniverse/alphamissense_tool.py
src/tooluniverse/arrayexpress_tool.py
src/tooluniverse/arxiv_tool.py
src/tooluniverse/async_base.py
src/tooluniverse/base_rest_tool.py
src/tooluniverse/base_tool.py
src/tooluniverse/bgee_tool.py
src/tooluniverse/bigg_models_tool.py
src/tooluniverse/bindingdb_tool.py
src/tooluniverse/biogrid_tool.py
src/tooluniverse/bioimage_archive_tool.py
src/tooluniverse/biomodels_tool.py
src/tooluniverse/bioportal_tool.py
src/tooluniverse/biorxiv_tool.py
src/tooluniverse/biosamples_tool.py
src/tooluniverse/biostudies_tool.py
src/tooluniverse/blast_tool.py
src/tooluniverse/boltz_tool.py
src/tooluniverse/brenda_tool.py
src/tooluniverse/build_optimizer.py
src/tooluniverse/bvbrc_tool.py
src/tooluniverse/cadd_tool.py
src/tooluniverse/cancer_prognosis_tool.py
src/tooluniverse/cath_tool.py
src/tooluniverse/cbioportal_tool.py
src/tooluniverse/cdc_tool.py
src/tooluniverse/cellmarker_tool.py
src/tooluniverse/cellosaurus_tool.py
src/tooluniverse/cellpainting_tool.py
src/tooluniverse/cellxgene_census_tool.py
src/tooluniverse/cellxgene_discovery_tool.py
src/tooluniverse/chebi_tool.py
src/tooluniverse/chem_compute_tool.py
src/tooluniverse/chem_tool.py
src/tooluniverse/chipatlas_tool.py
src/tooluniverse/civic_tool.py
src/tooluniverse/clingen_ar_tool.py
src/tooluniverse/clingen_dosage_tool.py
src/tooluniverse/clingen_tool.py
src/tooluniverse/clinical_society_tools.py
src/tooluniverse/clinical_trials_tool.py
src/tooluniverse/clinicaltrials_tool.py
src/tooluniverse/clinvar_tool.py
src/tooluniverse/clue_tool.py
src/tooluniverse/complex_portal_tool.py
src/tooluniverse/compose_tool.py
src/tooluniverse/core_tool.py
src/tooluniverse/cosmic_tool.py
src/tooluniverse/crossref_tool.py
src/tooluniverse/ctd_tool.py
src/tooluniverse/ctg_tool.py
src/tooluniverse/custom_tool.py
src/tooluniverse/dailymed_tool.py
src/tooluniverse/dataset_tool.py
src/tooluniverse/dbfetch_tool.py
src/tooluniverse/dblp_tool.py
src/tooluniverse/dbpedia_tool.py
src/tooluniverse/dbsnp_tool.py
src/tooluniverse/deepgo_tool.py
src/tooluniverse/default_config.py
src/tooluniverse/depmap_tool.py
src/tooluniverse/dfam_tool.py
src/tooluniverse/dgidb_tool.py
src/tooluniverse/disease_ontology_tool.py
src/tooluniverse/disgenet_tool.py
src/tooluniverse/disprot_tool.py
src/tooluniverse/dna_tools.py
src/tooluniverse/doaj_tool.py
src/tooluniverse/doctor.py
src/tooluniverse/dose_response_tool.py
src/tooluniverse/drug_synergy_tool.py
src/tooluniverse/ebi_proteins_coordinates_tool.py
src/tooluniverse/ebi_proteins_epitope_tool.py
src/tooluniverse/ebi_proteins_ext_tool.py
src/tooluniverse/ebi_proteins_features_tool.py
src/tooluniverse/ebi_proteins_interactions_tool.py
src/tooluniverse/ebi_search_tool.py
src/tooluniverse/ebi_taxonomy_tool.py
src/tooluniverse/efo_tool.py
src/tooluniverse/emdb_tool.py
src/tooluniverse/emolecules_tool.py
src/tooluniverse/ena_browser_tool.py
src/tooluniverse/ena_portal_tool.py
src/tooluniverse/enamine_tool.py
src/tooluniverse/encode_tool.py
src/tooluniverse/enrichr_tool.py
src/tooluniverse/ensembl_archive_tool.py
src/tooluniverse/ensembl_compara_tool.py
src/tooluniverse/ensembl_info_tool.py
src/tooluniverse/ensembl_ld_tool.py
src/tooluniverse/ensembl_map_tool.py
src/tooluniverse/ensembl_overlap_tool.py
src/tooluniverse/ensembl_phenotype_tool.py
src/tooluniverse/ensembl_regulation_tool.py
src/tooluniverse/ensembl_sequence_tool.py
src/tooluniverse/ensembl_tool.py
src/tooluniverse/ensembl_variation_ext_tool.py
src/tooluniverse/ensembl_vep_tool.py
src/tooluniverse/ensembl_xrefs_tool.py
src/tooluniverse/eol_tool.py
src/tooluniverse/epigenomics_tool.py
src/tooluniverse/epigraphdb_tool.py
src/tooluniverse/europe_pmc_tool.py
src/tooluniverse/europepmc_annotations_tool.py
src/tooluniverse/eve_tool.py
src/tooluniverse/exceptions.py
src/tooluniverse/execute_function.py
src/tooluniverse/expression_atlas_tool.py
src/tooluniverse/extended_hooks.py
src/tooluniverse/faers_analytics_tool.py
src/tooluniverse/fatcat_tool.py
src/tooluniverse/fda_label_tool.py
src/tooluniverse/fda_orange_book_tool.py
src/tooluniverse/fda_pharmacogenomic_biomarkers_tool.py
src/tooluniverse/federal_register_tool.py
src/tooluniverse/file_download_tool.py
src/tooluniverse/fooddata_central_tool.py
src/tooluniverse/fourdn_tool.py
src/tooluniverse/gbif_tool.py
src/tooluniverse/gdc_tool.py
src/tooluniverse/gene_ontology_tool.py
src/tooluniverse/generate_lazy_registry.py
src/tooluniverse/generate_tools.py
src/tooluniverse/genome_nexus_tool.py
src/tooluniverse/genomics_gene_search_tool.py
src/tooluniverse/geo_tool.py
src/tooluniverse/ghost_tool.py
src/tooluniverse/glygen_tool.py
src/tooluniverse/gnomad_tool.py
src/tooluniverse/gnps_tool.py
src/tooluniverse/go_api_tool.py
src/tooluniverse/gpcrdb_tool.py
src/tooluniverse/gprofiler_tool.py
src/tooluniverse/graphql_tool.py
src/tooluniverse/gtex_tool.py
src/tooluniverse/gtex_v2_tool.py
src/tooluniverse/gtopdb_tool.py
src/tooluniverse/gwas_tool.py
src/tooluniverse/gxa_tool.py
src/tooluniverse/hal_tool.py
src/tooluniverse/harmonizome_tool.py
src/tooluniverse/hca_tool.py
src/tooluniverse/health_disparities_tool.py
src/tooluniverse/hgnc_tool.py
src/tooluniverse/hmdb_tool.py
src/tooluniverse/hpa_tool.py
src/tooluniverse/hpo_tool.py
src/tooluniverse/http_api_server.py
src/tooluniverse/http_api_server_cli.py
src/tooluniverse/http_client.py
src/tooluniverse/http_utils.py
src/tooluniverse/humanbase_tool.py
src/tooluniverse/icd_tool.py
src/tooluniverse/identifiers_org_tool.py
src/tooluniverse/idt_tool.py
src/tooluniverse/iedb_tool.py
src/tooluniverse/imgt_tool.py
src/tooluniverse/impc_tool.py
src/tooluniverse/inaturalist_tool.py
src/tooluniverse/intact_tool.py
src/tooluniverse/interpro_domain_arch_tool.py
src/tooluniverse/interpro_entry_tool.py
src/tooluniverse/interpro_ext_tool.py
src/tooluniverse/interpro_tool.py
src/tooluniverse/interproscan_tool.py
src/tooluniverse/intogen_tool.py
src/tooluniverse/itis_tool.py
src/tooluniverse/jaspar_tool.py
src/tooluniverse/kegg_ext_tool.py
src/tooluniverse/kegg_tool.py
src/tooluniverse/l1000fwd_tool.py
src/tooluniverse/lipidmaps_tool.py
src/tooluniverse/llm_clients.py
src/tooluniverse/logging_config.py
src/tooluniverse/loinc_tool.py
src/tooluniverse/markitdown_tool.py
src/tooluniverse/mcp_client_tool.py
src/tooluniverse/mcp_integration.py
src/tooluniverse/mcp_tool_registry.py
src/tooluniverse/mcule_tool.py
src/tooluniverse/medlineplus_tool.py
src/tooluniverse/meme_tool.py
src/tooluniverse/memory_manager.py
src/tooluniverse/mesh_tool.py
src/tooluniverse/metaboanalyst_tool.py
src/tooluniverse/metabolights_tool.py
src/tooluniverse/metabolomics_workbench_tool.py
src/tooluniverse/metacyc_tool.py
src/tooluniverse/mgnify_expanded_tool.py
src/tooluniverse/mgnify_tool.py
src/tooluniverse/mirna_tool.py
src/tooluniverse/mobidb_tool.py
src/tooluniverse/molecule_2d_tool.py
src/tooluniverse/molecule_3d_tool.py
src/tooluniverse/monarch_v3_tool.py
src/tooluniverse/mpd_tool.py
src/tooluniverse/mydisease_tool.py
src/tooluniverse/mygene_tool.py
src/tooluniverse/ncbi_datasets_tool.py
src/tooluniverse/ncbi_eutils_tool.py
src/tooluniverse/ncbi_nucleotide_tool.py
src/tooluniverse/ncbi_sra_tool.py
src/tooluniverse/nci_thesaurus_tool.py
src/tooluniverse/ndex_tool.py
src/tooluniverse/neb_tm_tool.py
src/tooluniverse/neuromorpho_tool.py
src/tooluniverse/nextstrain_tool.py
src/tooluniverse/nhanes_tool.py
src/tooluniverse/nvidia_nim_tool.py
src/tooluniverse/obis_tool.py
src/tooluniverse/odphp_tool.py
src/tooluniverse/ols_tool.py
src/tooluniverse/oma_tool.py
src/tooluniverse/omim_tool.py
src/tooluniverse/omnipath_tool.py
src/tooluniverse/oncokb_tool.py
src/tooluniverse/openaire_tool.py
src/tooluniverse/openalex_tool.py
src/tooluniverse/openfda_adv_tool.py
src/tooluniverse/openfda_tool.py
src/tooluniverse/openneuro_tool.py
src/tooluniverse/opentree_tool.py
src/tooluniverse/orcid_tool.py
src/tooluniverse/orphanet_tool.py
src/tooluniverse/orthodb_tool.py
src/tooluniverse/osf_preprints_tool.py
src/tooluniverse/output_hook.py
src/tooluniverse/oxo_tool.py
src/tooluniverse/package_discovery_tool.py
src/tooluniverse/package_tool.py
src/tooluniverse/paleobiology_tool.py
src/tooluniverse/panther_tool.py
src/tooluniverse/pathway_commons_tool.py
src/tooluniverse/pdbe_api_tool.py
src/tooluniverse/pdbe_compound_tool.py
src/tooluniverse/pdbe_kb_tool.py
src/tooluniverse/pdbe_ligands_tool.py
src/tooluniverse/pdbe_search_tool.py
src/tooluniverse/pdbe_sifts_tool.py
src/tooluniverse/pdbe_validation_tool.py
src/tooluniverse/pdc_tool.py
src/tooluniverse/pfam_tool.py
src/tooluniverse/pharmacodb_tool.py
src/tooluniverse/pharmgkb_tool.py
src/tooluniverse/pharos_tool.py
src/tooluniverse/plant_reactome_tool.py
src/tooluniverse/pmc_tool.py
src/tooluniverse/pombase_tool.py
src/tooluniverse/pride_tool.py
src/tooluniverse/protacdb_tool.py
src/tooluniverse/protein_structure_3d_tool.py
src/tooluniverse/proteins_api_tool.py
src/tooluniverse/proteinsplus_tool.py
src/tooluniverse/proteomexchange_tool.py
src/tooluniverse/proteomicsdb_tool.py
src/tooluniverse/pubchem_bioassay_tool.py
src/tooluniverse/pubchem_tool.py
src/tooluniverse/pubchem_tox_tool.py
src/tooluniverse/pubmed_tool.py
src/tooluniverse/pubtator_tool.py
src/tooluniverse/pypi_package_inspector_tool.py
src/tooluniverse/python_executor_tool.py
src/tooluniverse/quickgo_tool.py
src/tooluniverse/rcsb_advanced_search_tool.py
src/tooluniverse/rcsb_data_tool.py
src/tooluniverse/rcsb_graphql_tool.py
src/tooluniverse/rcsb_pdb_tool.py
src/tooluniverse/rcsb_search_tool.py
src/tooluniverse/reactome_analysis_tool.py
src/tooluniverse/reactome_content_tool.py
src/tooluniverse/reactome_interactors_tool.py
src/tooluniverse/reactome_tool.py
src/tooluniverse/regulomedb_tool.py
src/tooluniverse/remap_tool.py
src/tooluniverse/remote_tool.py
src/tooluniverse/restful_tool.py
src/tooluniverse/rfam_tool.py
src/tooluniverse/rhea_tool.py
src/tooluniverse/rnacentral_tool.py
src/tooluniverse/rxnorm_tool.py
src/tooluniverse/sabdab_tool.py
src/tooluniverse/sasbdb_tool.py
src/tooluniverse/screen_tool.py
src/tooluniverse/semantic_scholar_tool.py
src/tooluniverse/sgd_tool.py
src/tooluniverse/simbad_tool.py
src/tooluniverse/smcp.py
src/tooluniverse/smcp_server.py
src/tooluniverse/smolagent_tool.py
src/tooluniverse/spliceai_tool.py
src/tooluniverse/stitch_tool.py
src/tooluniverse/string_ext_tool.py
src/tooluniverse/string_tool.py
src/tooluniverse/survival_tool.py
src/tooluniverse/swiss_target_tool.py
src/tooluniverse/swissadme_tool.py
src/tooluniverse/swissdock_tool.py
src/tooluniverse/swissmodel_tool.py
src/tooluniverse/synbiohub_tool.py
src/tooluniverse/synergxdb_tool.py
src/tooluniverse/task_manager.py
src/tooluniverse/task_progress.py
src/tooluniverse/therasabdab_tool.py
src/tooluniverse/three_d_beacons_tool.py
src/tooluniverse/timer_tool.py
src/tooluniverse/tool_defaults.py
src/tooluniverse/tool_discovery_tools.py
src/tooluniverse/tool_finder_embedding.py
src/tooluniverse/tool_finder_keyword.py
src/tooluniverse/tool_finder_llm.py
src/tooluniverse/tool_graph_web_ui.py
src/tooluniverse/tool_name_utils.py
src/tooluniverse/tool_registry.py
src/tooluniverse/ucsc_genome_tool.py
src/tooluniverse/umls_tool.py
src/tooluniverse/unichem_tool.py
src/tooluniverse/unified_guideline_tools.py
src/tooluniverse/uniparc_tool.py
src/tooluniverse/uniprot_idmapping_tool.py
src/tooluniverse/uniprot_locations_tool.py
src/tooluniverse/uniprot_ref_tool.py
src/tooluniverse/uniprot_taxonomy_tool.py
src/tooluniverse/uniprot_tool.py
src/tooluniverse/uniref_tool.py
src/tooluniverse/unpaywall_tool.py
src/tooluniverse/url_tool.py
src/tooluniverse/uspto_tool.py
src/tooluniverse/utils.py
src/tooluniverse/visualization_tool.py
src/tooluniverse/web_search_tool.py
src/tooluniverse/wfgy_promptbundle_tool.py
src/tooluniverse/who_gho_tool.py
src/tooluniverse/wikidata_sparql_tool.py
src/tooluniverse/wikipathways_ext_tool.py
src/tooluniverse/wikipathways_tool.py
src/tooluniverse/wikipedia_tool.py
src/tooluniverse/wormbase_tool.py
src/tooluniverse/worms_tool.py
src/tooluniverse/xml_tool.py
src/tooluniverse/zenodo_tool.py
src/tooluniverse/zinc_tool.py
src/tooluniverse.egg-info/PKG-INFO
src/tooluniverse.egg-info/SOURCES.txt
src/tooluniverse.egg-info/dependency_links.txt
src/tooluniverse.egg-info/entry_points.txt
src/tooluniverse.egg-info/requires.txt
src/tooluniverse.egg-info/top_level.txt
src/tooluniverse/cache/__init__.py
src/tooluniverse/cache/memory_cache.py
src/tooluniverse/cache/result_cache_manager.py
src/tooluniverse/cache/sqlite_backend.py
src/tooluniverse/compose_scripts/__init__.py
src/tooluniverse/compose_scripts/biomarker_discovery.py
src/tooluniverse/compose_scripts/comprehensive_drug_discovery.py
src/tooluniverse/compose_scripts/drug_safety_analyzer.py
src/tooluniverse/compose_scripts/enhanced_multi_agent_literature_search.py
src/tooluniverse/compose_scripts/literature_tool.py
src/tooluniverse/compose_scripts/multi_agent_literature_search.py
src/tooluniverse/compose_scripts/output_summarizer.py
src/tooluniverse/compose_scripts/tool_description_optimizer.py
src/tooluniverse/compose_scripts/tool_discover.py
src/tooluniverse/compose_scripts/tool_graph_composer.py
src/tooluniverse/compose_scripts/tool_graph_generation.py
src/tooluniverse/compose_scripts/tool_metadata_generator.py
src/tooluniverse/data/__init__.py
src/tooluniverse/data/ada_aha_nccn_tools.json
src/tooluniverse/data/addgene_tools.json
src/tooluniverse/data/admetai_tools.json
src/tooluniverse/data/adverse_event_tools.json
src/tooluniverse/data/agentic_tools.json
src/tooluniverse/data/allen_brain_tools.json
src/tooluniverse/data/alliance_genome_tools.json
src/tooluniverse/data/alphafold_tools.json
src/tooluniverse/data/alphamissense_tools.json
src/tooluniverse/data/anaconda_tools.json
src/tooluniverse/data/arrayexpress_tools.json
src/tooluniverse/data/artic_tools.json
src/tooluniverse/data/arxiv_tools.json
src/tooluniverse/data/bgee_tools.json
src/tooluniverse/data/bigg_models_tools.json
src/tooluniverse/data/bindingdb_tools.json
src/tooluniverse/data/bioconductor_tools.json
src/tooluniverse/data/biogrid_tools.json
src/tooluniverse/data/bioimage_archive_tools.json
src/tooluniverse/data/biomodels_tools.json
src/tooluniverse/data/bioportal_tools.json
src/tooluniverse/data/biorxiv_ext_tools.json
src/tooluniverse/data/biorxiv_tools.json
src/tooluniverse/data/biosamples_tools.json
src/tooluniverse/data/biostudies_tools.json
src/tooluniverse/data/biothings_tools.json
src/tooluniverse/data/biotools_registry_tools.json
src/tooluniverse/data/blast_tools.json
src/tooluniverse/data/bmrb_tools.json
src/tooluniverse/data/boltz_mcp_loader_tools.json
src/tooluniverse/data/brenda_tools.json
src/tooluniverse/data/bvbrc_tools.json
src/tooluniverse/data/cadd_tools.json
src/tooluniverse/data/cancer_prognosis_tools.json
src/tooluniverse/data/cath_tools.json
src/tooluniverse/data/cbioportal_tools.json
src/tooluniverse/data/cdc_tools.json
src/tooluniverse/data/ceda_tools.json
src/tooluniverse/data/cellmarker_tools.json
src/tooluniverse/data/cellosaurus_tools.json
src/tooluniverse/data/cellpainting_tools.json
src/tooluniverse/data/cellxgene_census_tools.json
src/tooluniverse/data/cellxgene_discovery_tools.json
src/tooluniverse/data/channelsdb_tools.json
src/tooluniverse/data/chebi_tools.json
src/tooluniverse/data/chem_compute_tools.json
src/tooluniverse/data/chembl_tools.json
src/tooluniverse/data/chipatlas_tools.json
src/tooluniverse/data/civic_tools.json
src/tooluniverse/data/clingen_ar_tools.json
src/tooluniverse/data/clingen_dosage_api_tools.json
src/tooluniverse/data/clingen_tools.json
src/tooluniverse/data/clinical_guidelines_tools.json
src/tooluniverse/data/clinicaltrials_gov_tools.json
src/tooluniverse/data/clinvar_tools.json
src/tooluniverse/data/clue_tools.json
src/tooluniverse/data/cod_crystal_tools.json
src/tooluniverse/data/col_tools.json
src/tooluniverse/data/compact_mode_tools.json
src/tooluniverse/data/complex_portal_tools.json
src/tooluniverse/data/compose_tools.json
src/tooluniverse/data/core_tools.json
src/tooluniverse/data/cosmic_tools.json
src/tooluniverse/data/cpic_tools.json
src/tooluniverse/data/cran_tools.json
src/tooluniverse/data/crossref_tools.json
src/tooluniverse/data/ctd_tools.json
src/tooluniverse/data/dailymed_tools.json
src/tooluniverse/data/datacite_tools.json
src/tooluniverse/data/dataone_tools.json
src/tooluniverse/data/dataset_tools.json
src/tooluniverse/data/dataverse_tools.json
src/tooluniverse/data/dbfetch_tools.json
src/tooluniverse/data/dblp_tools.json
src/tooluniverse/data/dbpedia_tools.json
src/tooluniverse/data/dbsnp_tools.json
src/tooluniverse/data/deepgo_tools.json
src/tooluniverse/data/depmap_tools.json
src/tooluniverse/data/dfam_tools.json
src/tooluniverse/data/dgidb_tools.json
src/tooluniverse/data/disease_ontology_tools.json
src/tooluniverse/data/disease_sh_ext_tools.json
src/tooluniverse/data/disease_target_score_tools.json
src/tooluniverse/data/diseasesh_tools.json
src/tooluniverse/data/disgenet_tools.json
src/tooluniverse/data/disprot_tools.json
src/tooluniverse/data/dna_tools.json
src/tooluniverse/data/doaj_tools.json
src/tooluniverse/data/dose_response_tools.json
src/tooluniverse/data/drug_discovery_agents.json
src/tooluniverse/data/drug_synergy_tools.json
src/tooluniverse/data/dryad_tools.json
src/tooluniverse/data/ebi_proteins_coordinates_tools.json
src/tooluniverse/data/ebi_proteins_epitope_tools.json
src/tooluniverse/data/ebi_proteins_ext_tools.json
src/tooluniverse/data/ebi_proteins_features_tools.json
src/tooluniverse/data/ebi_proteins_interactions_tools.json
src/tooluniverse/data/ebi_search_tools.json
src/tooluniverse/data/ebi_taxonomy_tools.json
src/tooluniverse/data/ebird_taxonomy_tools.json
src/tooluniverse/data/efo_tools.json
src/tooluniverse/data/elixir_tess_tools.json
src/tooluniverse/data/embedding_tools.json
src/tooluniverse/data/emdb_tools.json
src/tooluniverse/data/emolecules_tools.json
src/tooluniverse/data/ena_browser_tools.json
src/tooluniverse/data/ena_portal_tools.json
src/tooluniverse/data/enamine_tools.json
src/tooluniverse/data/encode_tools.json
src/tooluniverse/data/enrichr_tools.json
src/tooluniverse/data/ensembl_archive_tools.json
src/tooluniverse/data/ensembl_compara_tools.json
src/tooluniverse/data/ensembl_info_tools.json
src/tooluniverse/data/ensembl_ld_tools.json
src/tooluniverse/data/ensembl_map_tools.json
src/tooluniverse/data/ensembl_overlap_tools.json
src/tooluniverse/data/ensembl_phenotype_tools.json
src/tooluniverse/data/ensembl_regulation_tools.json
src/tooluniverse/data/ensembl_sequence_tools.json
src/tooluniverse/data/ensembl_tools.json
src/tooluniverse/data/ensembl_variation_ext_tools.json
src/tooluniverse/data/ensembl_vep_tools.json
src/tooluniverse/data/ensembl_xrefs_tools.json
src/tooluniverse/data/eol_tools.json
src/tooluniverse/data/epigenomics_tools.json
src/tooluniverse/data/epigraphdb_tools.json
src/tooluniverse/data/eqtl_tools.json
src/tooluniverse/data/erddap_tools.json
src/tooluniverse/data/euhealth_tools.json
src/tooluniverse/data/europe_pmc_tools.json
src/tooluniverse/data/europepmc_annotations_tools.json
src/tooluniverse/data/europepmc_citations_tools.json
src/tooluniverse/data/eurostat_tools.json
src/tooluniverse/data/eva_tools.json
src/tooluniverse/data/eve_tools.json
src/tooluniverse/data/expert_feedback_tools.json
src/tooluniverse/data/expression_atlas_tools.json
src/tooluniverse/data/faers_analytics_tools.json
src/tooluniverse/data/fatcat_tools.json
src/tooluniverse/data/fda_drug_adverse_event_detail_tools.json
src/tooluniverse/data/fda_drug_adverse_event_tools.json
src/tooluniverse/data/fda_drug_labeling_tools.json
src/tooluniverse/data/fda_drugs_with_brand_generic_names_for_tool.py
src/tooluniverse/data/fda_orange_book_tools.json
src/tooluniverse/data/fda_pharmacogenomic_biomarkers_tools.json
src/tooluniverse/data/figshare_tools.json
src/tooluniverse/data/file_download_tools.json
src/tooluniverse/data/finder_tools.json
src/tooluniverse/data/flybase_tools.json
src/tooluniverse/data/flymine_tools.json
src/tooluniverse/data/fooddata_central_tools.json
src/tooluniverse/data/fourdn_tools.json
src/tooluniverse/data/fpbase_tools.json
src/tooluniverse/data/gbif_ext_tools.json
src/tooluniverse/data/gbif_tools.json
src/tooluniverse/data/gdc_tools.json
src/tooluniverse/data/gene2phenotype_tools.json
src/tooluniverse/data/gene_ontology_tools.json
src/tooluniverse/data/genenetwork_ext_tools.json
src/tooluniverse/data/genenetwork_tools.json
src/tooluniverse/data/genome_nexus_tools.json
src/tooluniverse/data/geo_tools.json
src/tooluniverse/data/github_tools.json
src/tooluniverse/data/glygen_tools.json
src/tooluniverse/data/gnomad_tools.json
src/tooluniverse/data/gnps_tools.json
src/tooluniverse/data/go_api_tools.json
src/tooluniverse/data/gpcrdb_tools.json
src/tooluniverse/data/gprofiler_tools.json
src/tooluniverse/data/gtex_tools.json
src/tooluniverse/data/gtex_v2_tools.json
src/tooluniverse/data/gtopdb_tools.json
src/tooluniverse/data/gwas_tools.json
src/tooluniverse/data/gxa_tools.json
src/tooluniverse/data/hal_tools.json
src/tooluniverse/data/harmonizome_tools.json
src/tooluniverse/data/hca_tools.json
src/tooluniverse/data/health_disparities_tools.json
src/tooluniverse/data/hgnc_tools.json
src/tooluniverse/data/hmdb_tools.json
src/tooluniverse/data/hpa_tools.json
src/tooluniverse/data/hpo_tools.json
src/tooluniverse/data/huggingface_tools.json
src/tooluniverse/data/humanbase_tools.json
src/tooluniverse/data/humanmine_tools.json
src/tooluniverse/data/icd_tools.json
src/tooluniverse/data/icite_tools.json
src/tooluniverse/data/identifiers_org_tools.json
src/tooluniverse/data/idigbio_tools.json
src/tooluniverse/data/idmap_tools.json
src/tooluniverse/data/idr_tools.json
src/tooluniverse/data/idt_tools.json
src/tooluniverse/data/iedb_tools.json
src/tooluniverse/data/imgt_tools.json
src/tooluniverse/data/impc_tools.json
src/tooluniverse/data/inaturalist_tools.json
src/tooluniverse/data/inspirehep_tools.json
src/tooluniverse/data/intact_tools.json
src/tooluniverse/data/interpro_domain_arch_tools.json
src/tooluniverse/data/interpro_entry_tools.json
src/tooluniverse/data/interpro_ext_tools.json
src/tooluniverse/data/interpro_tools.json
src/tooluniverse/data/interproscan_tools.json
src/tooluniverse/data/intogen_tools.json
src/tooluniverse/data/itis_tools.json
src/tooluniverse/data/jaspar_tools.json
src/tooluniverse/data/jpl_horizons_tools.json
src/tooluniverse/data/kegg_brite_tools.json
src/tooluniverse/data/kegg_ext_tools.json
src/tooluniverse/data/kegg_tools.json
src/tooluniverse/data/klifs_tools.json
src/tooluniverse/data/l1000fwd_tools.json
src/tooluniverse/data/lipidmaps_tools.json
src/tooluniverse/data/literature_search_tools.json
src/tooluniverse/data/litvar_tools.json
src/tooluniverse/data/lncrna_tools.json
src/tooluniverse/data/loinc_tools.json
src/tooluniverse/data/lotus_tools.json
src/tooluniverse/data/marine_regions_tools.json
src/tooluniverse/data/markitdown_tools.json
src/tooluniverse/data/massbank_tools.json
src/tooluniverse/data/mcp_auto_loader_esm.json
src/tooluniverse/data/mcpautoloadertool_defaults.json
src/tooluniverse/data/mcule_tools.json
src/tooluniverse/data/medlineplus_tools.json
src/tooluniverse/data/medrxiv_tools.json
src/tooluniverse/data/meme_tools.json
src/tooluniverse/data/mesh_tools.json
src/tooluniverse/data/metaboanalyst_tools.json
src/tooluniverse/data/metabolights_tools.json
src/tooluniverse/data/metabolomics_workbench_tools.json
src/tooluniverse/data/metacyc_tools.json
src/tooluniverse/data/metnorway_tools.json
src/tooluniverse/data/mgnify_expanded_tools.json
src/tooluniverse/data/mgnify_tools.json
src/tooluniverse/data/mibig_tools.json
src/tooluniverse/data/mirna_tools.json
src/tooluniverse/data/mobidb_tools.json
src/tooluniverse/data/modeldb_tools.json
src/tooluniverse/data/molecule_2d_tools.json
src/tooluniverse/data/molecule_3d_tools.json
src/tooluniverse/data/monarch_tools.json
src/tooluniverse/data/monarch_v3_tools.json
src/tooluniverse/data/mousemine_tools.json
src/tooluniverse/data/mpd_tools.json
src/tooluniverse/data/msigdb_tools.json
src/tooluniverse/data/mydisease_tools.json
src/tooluniverse/data/nasa_cmr_tools.json
src/tooluniverse/data/nasa_donki_tools.json
src/tooluniverse/data/nasa_eonet_tools.json
src/tooluniverse/data/nasa_exoplanet_tools.json
src/tooluniverse/data/nasa_ned_tools.json
src/tooluniverse/data/nasa_sbdb_tools.json
src/tooluniverse/data/ncbi_datasets_tools.json
src/tooluniverse/data/ncbi_gene_tools.json
src/tooluniverse/data/ncbi_nucleotide_tools.json
src/tooluniverse/data/ncbi_sra_tools.json
src/tooluniverse/data/nci_drugdict_tools.json
src/tooluniverse/data/nci_thesaurus_tools.json
src/tooluniverse/data/ndex_tools.json
src/tooluniverse/data/neb_tm_tools.json
src/tooluniverse/data/neuromorpho_tools.json
src/tooluniverse/data/neurovault_tools.json
src/tooluniverse/data/nextstrain_tools.json
src/tooluniverse/data/nhanes_tools.json
src/tooluniverse/data/nominatim_tools.json
src/tooluniverse/data/nvidia_nim_tools.json
src/tooluniverse/data/nws_tools.json
src/tooluniverse/data/obis_tools.json
src/tooluniverse/data/odphp_tools.json
src/tooluniverse/data/ols_tools.json
src/tooluniverse/data/oma_tools.json
src/tooluniverse/data/omicsdi_tools.json
src/tooluniverse/data/omim_tools.json
src/tooluniverse/data/omnipath_tools.json
src/tooluniverse/data/oncokb_tools.json
src/tooluniverse/data/open_meteo_airquality_tools.json
src/tooluniverse/data/open_meteo_climate_tools.json
src/tooluniverse/data/open_meteo_flood_tools.json
src/tooluniverse/data/open_meteo_marine_tools.json
src/tooluniverse/data/open_meteo_tools.json
src/tooluniverse/data/openaire_tools.json
src/tooluniverse/data/openalex_tools.json
src/tooluniverse/data/opencitations_tools.json
src/tooluniverse/data/openfda_label_tools.json
src/tooluniverse/data/openfda_tools.json
src/tooluniverse/data/openfoodfacts_tools.json
src/tooluniverse/data/openml_tools.json
src/tooluniverse/data/openneuro_tools.json
src/tooluniverse/data/opentarget_genetics_tools.json
src/tooluniverse/data/opentarget_tools.json
src/tooluniverse/data/opentopodata_tools.json
src/tooluniverse/data/opentree_tools.json
src/tooluniverse/data/optimizer_tools.json
src/tooluniverse/data/orcid_tools.json
src/tooluniverse/data/orphanet_tools.json
src/tooluniverse/data/orthodb_tools.json
src/tooluniverse/data/osf_preprints_tools.json
src/tooluniverse/data/output_summarization_tools.json
src/tooluniverse/data/oxo_tools.json
src/tooluniverse/data/package_discovery_tools.json
src/tooluniverse/data/paleobiology_tools.json
src/tooluniverse/data/panelapp_tools.json
src/tooluniverse/data/panther_tools.json
src/tooluniverse/data/pathway_commons_tools.json
src/tooluniverse/data/pdb_redo_tools.json
src/tooluniverse/data/pdbe_api_tools.json
src/tooluniverse/data/pdbe_compound_tools.json
src/tooluniverse/data/pdbe_graph_tools.json
src/tooluniverse/data/pdbe_kb_tools.json
src/tooluniverse/data/pdbe_ligands_tools.json
src/tooluniverse/data/pdbe_search_tools.json
src/tooluniverse/data/pdbe_sifts_tools.json
src/tooluniverse/data/pdbe_validation_tools.json
src/tooluniverse/data/pdc_tools.json
src/tooluniverse/data/pfam_tools.json
src/tooluniverse/data/pharmacodb_tools.json
src/tooluniverse/data/pharmgkb_tools.json
src/tooluniverse/data/pharmvar_tools.json
src/tooluniverse/data/pharos_tools.json
src/tooluniverse/data/plant_reactome_tools.json
src/tooluniverse/data/pmc_tools.json
src/tooluniverse/data/pombase_tools.json
src/tooluniverse/data/powo_tools.json
src/tooluniverse/data/ppi_tools.json
src/tooluniverse/data/pride_tools.json
src/tooluniverse/data/protacdb_tools.json
src/tooluniverse/data/protein_structure_3d_tools.json
src/tooluniverse/data/proteins_api_tools.json
src/tooluniverse/data/proteinsplus_tools.json
src/tooluniverse/data/proteinsplus_tools.json.backup
src/tooluniverse/data/proteomexchange_tools.json
src/tooluniverse/data/proteomicsdb_tools.json
src/tooluniverse/data/pubchem_bioassay_tools.json
src/tooluniverse/data/pubchem_tools.json
src/tooluniverse/data/pubchem_tox_tools.json
src/tooluniverse/data/pubmed_tools.json
src/tooluniverse/data/pubtator3_ext_tools.json
src/tooluniverse/data/pubtator_tools.json
src/tooluniverse/data/pypi_package_inspector_tools.json
src/tooluniverse/data/python_executor_tools.json
src/tooluniverse/data/quickgo_tools.json
src/tooluniverse/data/rcsb_advanced_search_tools.json
src/tooluniverse/data/rcsb_chemcomp_tools.json
src/tooluniverse/data/rcsb_data_tools.json
src/tooluniverse/data/rcsb_graphql_tools.json
src/tooluniverse/data/rcsb_pdb_tools.json
src/tooluniverse/data/rcsb_search_tools.json
src/tooluniverse/data/reactome_analysis_tools.json
src/tooluniverse/data/reactome_content_tools.json
src/tooluniverse/data/reactome_interactors_tools.json
src/tooluniverse/data/reactome_tools.json
src/tooluniverse/data/regulomedb_tools.json
src/tooluniverse/data/remap_tools.json
src/tooluniverse/data/rfam_tools.json
src/tooluniverse/data/rhea_tools.json
src/tooluniverse/data/rnacentral_tools.json
src/tooluniverse/data/ror_tools.json
src/tooluniverse/data/rxnorm_tools.json
src/tooluniverse/data/sabdab_tools.json
src/tooluniverse/data/sasbdb_tools.json
src/tooluniverse/data/scanprosite_tools.json
src/tooluniverse/data/scite_tools.json
src/tooluniverse/data/screen_tools.json
src/tooluniverse/data/sdss_tools.json
src/tooluniverse/data/semantic_scholar_ext_tools.json
src/tooluniverse/data/semantic_scholar_tools.json
src/tooluniverse/data/sgd_tools.json
src/tooluniverse/data/simbad_tools.json
src/tooluniverse/data/smolagent_tools.json
src/tooluniverse/data/soilgrids_tools.json
src/tooluniverse/data/special_tools.json
src/tooluniverse/data/spliceai_tools.json
src/tooluniverse/data/stitch_tools.json
src/tooluniverse/data/string_ext_tools.json
src/tooluniverse/data/string_network_tools.json
src/tooluniverse/data/sunrise_sunset_tools.json
src/tooluniverse/data/survival_tools.json
src/tooluniverse/data/swiss_target_tools.json
src/tooluniverse/data/swissadme_tools.json
src/tooluniverse/data/swissdock_tools.json
src/tooluniverse/data/swissmodel_tools.json
src/tooluniverse/data/synbiohub_tools.json
src/tooluniverse/data/synergxdb_tools.json
src/tooluniverse/data/targetmine_tools.json
src/tooluniverse/data/tcia_tools.json
src/tooluniverse/data/therasabdab_tools.json
src/tooluniverse/data/three_d_beacons_tools.json
src/tooluniverse/data/timer_tools.json
src/tooluniverse/data/tool_composition_tools.json
src/tooluniverse/data/tool_discovery_agents.json
src/tooluniverse/data/tool_discovery_agents.json.backup
src/tooluniverse/data/toolfinderkeyword_defaults.json
src/tooluniverse/data/txagent_client_tools.json
src/tooluniverse/data/ucsc_genome_tools.json
src/tooluniverse/data/umls_tools.json
src/tooluniverse/data/unichem_tools.json
src/tooluniverse/data/unified_guideline_tools.json
src/tooluniverse/data/uniparc_tools.json
src/tooluniverse/data/uniprot_idmapping_tools.json
src/tooluniverse/data/uniprot_locations_tools.json
src/tooluniverse/data/uniprot_proteomes_tools.json
src/tooluniverse/data/uniprot_ref_tools.json
src/tooluniverse/data/uniprot_taxonomy_tools.json
src/tooluniverse/data/uniprot_tools.json
src/tooluniverse/data/uniref_tools.json
src/tooluniverse/data/unpaywall_tools.json
src/tooluniverse/data/url_fetch_tools.json
src/tooluniverse/data/uscensus_tools.json
src/tooluniverse/data/usgs_earthquake_tools.json
src/tooluniverse/data/usgs_water_tools.json
src/tooluniverse/data/uspto_downloader_tools.json
src/tooluniverse/data/uspto_tools.json
src/tooluniverse/data/variant_validator_tools.json
src/tooluniverse/data/veupathdb_tools.json
src/tooluniverse/data/waqi_tools.json
src/tooluniverse/data/web_search_tools.json
src/tooluniverse/data/wfgy_promptbundle_tools.json
src/tooluniverse/data/who_gho_tools.json
src/tooluniverse/data/wikidata_entity_tools.json
src/tooluniverse/data/wikidata_sparql_tools.json
src/tooluniverse/data/wikipathways_ext_tools.json
src/tooluniverse/data/wikipathways_tools.json
src/tooluniverse/data/wikipedia_ext_tools.json
src/tooluniverse/data/wikipedia_tools.json
src/tooluniverse/data/worldbank_tools.json
src/tooluniverse/data/wormbase_tools.json
src/tooluniverse/data/worms_tools.json
src/tooluniverse/data/xml_tools.json
src/tooluniverse/data/zenodo_tools.json
src/tooluniverse/data/zfin_tools.json
src/tooluniverse/data/zinc_tools.json
src/tooluniverse/data/packages/bioinformatics_core_tools.json
src/tooluniverse/data/packages/categorized_tools.txt
src/tooluniverse/data/packages/cheminformatics_tools.json
src/tooluniverse/data/packages/earth_sciences_tools.json
src/tooluniverse/data/packages/genomics_tools.json
src/tooluniverse/data/packages/image_processing_tools.json
src/tooluniverse/data/packages/machine_learning_tools.json
src/tooluniverse/data/packages/neuroscience_tools.json
src/tooluniverse/data/packages/original_tools.txt
src/tooluniverse/data/packages/physics_astronomy_tools.json
src/tooluniverse/data/packages/scientific_computing_tools.json
src/tooluniverse/data/packages/single_cell_tools.json
src/tooluniverse/data/packages/structural_biology_tools.json
src/tooluniverse/data/packages/visualization_tools.json
src/tooluniverse/database_setup/__init__.py
src/tooluniverse/database_setup/cli.py
src/tooluniverse/database_setup/embed_utils.py
src/tooluniverse/database_setup/embedder.py
src/tooluniverse/database_setup/embedding_database.py
src/tooluniverse/database_setup/embedding_sync.py
src/tooluniverse/database_setup/generic_embedding_search_tool.py
src/tooluniverse/database_setup/packager.py
src/tooluniverse/database_setup/pipeline.py
src/tooluniverse/database_setup/provider_resolver.py
src/tooluniverse/database_setup/search.py
src/tooluniverse/database_setup/sqlite_store.py
src/tooluniverse/database_setup/vector_store.py
src/tooluniverse/database_setup/hf/sync_hf.py
src/tooluniverse/euhealth/euhealth_live.py
src/tooluniverse/euhealth/euhealth_tool.py
src/tooluniverse/euhealth/tools_runtime.py
src/tooluniverse/remote/boltz/boltz_mcp_server.py
src/tooluniverse/remote/depmap_24q2/depmap_24q2_mcp_tool.py
src/tooluniverse/remote/esm/esm_tool.py
src/tooluniverse/remote/expert_feedback/human_expert_mcp_tools.py
src/tooluniverse/remote/expert_feedback/simple_test.py
src/tooluniverse/remote/expert_feedback/start_web_interface.py
src/tooluniverse/remote/expert_feedback/web_only_interface.py
src/tooluniverse/remote/immune_compass/compass_tool.py
src/tooluniverse/remote/pinnacle/pinnacle_tool.py
src/tooluniverse/remote/transcriptformer/transcriptformer_tool.py
src/tooluniverse/remote/uspto_downloader/uspto_downloader_mcp_server.py
src/tooluniverse/remote/uspto_downloader/uspto_downloader_tool.py
src/tooluniverse/scripts/filter_tool_files.py
src/tooluniverse/scripts/generate_tool_graph.py
src/tooluniverse/scripts/visualize_tool_graph.py
src/tooluniverse/space/__init__.py
src/tooluniverse/space/loader.py
src/tooluniverse/space/validator.py
src/tooluniverse/tools/ACC_list_guidelines.py
src/tooluniverse/tools/ADA_get_standards_section.py
src/tooluniverse/tools/ADA_list_standards_sections.py
src/tooluniverse/tools/ADA_search_standards.py
src/tooluniverse/tools/ADMETAI_predict_BBB_penetrance.py
src/tooluniverse/tools/ADMETAI_predict_CYP_interactions.py
src/tooluniverse/tools/ADMETAI_predict_bioavailability.py
src/tooluniverse/tools/ADMETAI_predict_clearance_distribution.py
src/tooluniverse/tools/ADMETAI_predict_nuclear_receptor_activity.py
src/tooluniverse/tools/ADMETAI_predict_physicochemical_properties.py
src/tooluniverse/tools/ADMETAI_predict_solubility_lipophilicity_hydration.py
src/tooluniverse/tools/ADMETAI_predict_stress_response.py
src/tooluniverse/tools/ADMETAI_predict_toxicity.py
src/tooluniverse/tools/ADMETAnalyzerAgent.py
src/tooluniverse/tools/AHA_ACC_get_guideline.py
src/tooluniverse/tools/AHA_ACC_search_guidelines.py
src/tooluniverse/tools/AHA_list_guidelines.py
src/tooluniverse/tools/Addgene_get_plasmid.py
src/tooluniverse/tools/Addgene_search_depositors.py
src/tooluniverse/tools/Addgene_search_plasmids.py
src/tooluniverse/tools/AdvancedCodeQualityAnalyzer.py
src/tooluniverse/tools/AdverseEventICDMapper.py
src/tooluniverse/tools/AdverseEventPredictionQuestionGenerator.py
src/tooluniverse/tools/AdverseEventPredictionQuestionGeneratorWithContext.py
src/tooluniverse/tools/AllenBrain_get_expression_datasets.py
src/tooluniverse/tools/AllenBrain_get_structure.py
src/tooluniverse/tools/AllenBrain_search_genes.py
src/tooluniverse/tools/AllenBrain_search_structures.py
src/tooluniverse/tools/Alliance_get_disease.py
src/tooluniverse/tools/Alliance_get_disease_genes.py
src/tooluniverse/tools/Alliance_get_gene.py
src/tooluniverse/tools/Alliance_get_gene_phenotypes.py
src/tooluniverse/tools/Alliance_search_genes.py
src/tooluniverse/tools/AlphaMissense_get_protein_scores.py
src/tooluniverse/tools/AlphaMissense_get_residue_scores.py
src/tooluniverse/tools/AlphaMissense_get_variant_score.py
src/tooluniverse/tools/Anaconda_get_package.py
src/tooluniverse/tools/Anaconda_search_packages.py
src/tooluniverse/tools/ArXiv_get_pdf_snippets.py
src/tooluniverse/tools/ArXiv_search_papers.py
src/tooluniverse/tools/ArgumentDescriptionOptimizer.py
src/tooluniverse/tools/ArtIC_get_artwork.py
src/tooluniverse/tools/ArtIC_search_artworks.py
src/tooluniverse/tools/BLAST_nucleotide_search.py
src/tooluniverse/tools/BLAST_protein_search.py
src/tooluniverse/tools/BMRB_get_entries_by_pdb_id.py
src/tooluniverse/tools/BMRB_get_entries_by_uniprot.py
src/tooluniverse/tools/BMRB_get_entry.py
src/tooluniverse/tools/BMRB_get_entry_citation.py
src/tooluniverse/tools/BMRB_search_by_keyword.py
src/tooluniverse/tools/BRENDA_get_enzyme_info.py
src/tooluniverse/tools/BRENDA_get_inhibitors.py
src/tooluniverse/tools/BRENDA_get_kcat.py
src/tooluniverse/tools/BRENDA_get_km.py
src/tooluniverse/tools/BVBRC_get_genome.py
src/tooluniverse/tools/BVBRC_get_protein_structure.py
src/tooluniverse/tools/BVBRC_get_taxonomy.py
src/tooluniverse/tools/BVBRC_search_amr.py
src/tooluniverse/tools/BVBRC_search_epitopes.py
src/tooluniverse/tools/BVBRC_search_genome_features.py
src/tooluniverse/tools/BVBRC_search_genomes.py
src/tooluniverse/tools/BVBRC_search_pathways.py
src/tooluniverse/tools/BVBRC_search_protein_structures.py
src/tooluniverse/tools/BVBRC_search_specialty_genes.py
src/tooluniverse/tools/BVBRC_search_subsystems.py
src/tooluniverse/tools/BVBRC_search_surveillance.py
src/tooluniverse/tools/BVBRC_search_taxonomy.py
src/tooluniverse/tools/Bgee_get_gene_expression.py
src/tooluniverse/tools/Bgee_list_species.py
src/tooluniverse/tools/Bgee_search_genes.py
src/tooluniverse/tools/BiGG_get_database_version.py
src/tooluniverse/tools/BiGG_get_metabolite.py
src/tooluniverse/tools/BiGG_get_model.py
src/tooluniverse/tools/BiGG_get_model_reactions.py
src/tooluniverse/tools/BiGG_get_reaction.py
src/tooluniverse/tools/BiGG_list_models.py
src/tooluniverse/tools/BiGG_search.py
src/tooluniverse/tools/BindingDB_get_ligands_by_pdb.py
src/tooluniverse/tools/BindingDB_get_ligands_by_uniprot.py
src/tooluniverse/tools/BindingDB_get_ligands_by_uniprots.py
src/tooluniverse/tools/BindingDB_get_targets_by_compound.py
src/tooluniverse/tools/BioGRID_get_chemical_interactions.py
src/tooluniverse/tools/BioGRID_get_interactions.py
src/tooluniverse/tools/BioGRID_get_ptms.py
src/tooluniverse/tools/BioGRID_search_by_pubmed.py
src/tooluniverse/tools/BioImageArchive_get_study.py
src/tooluniverse/tools/BioImageArchive_search_bioimages.py
src/tooluniverse/tools/BioImageArchive_search_studies.py
src/tooluniverse/tools/BioModels_download_model.py
src/tooluniverse/tools/BioModels_get_model.py
src/tooluniverse/tools/BioModels_list_files.py
src/tooluniverse/tools/BioModels_search_parameters.py
src/tooluniverse/tools/BioPortal_annotate_text.py
src/tooluniverse/tools/BioPortal_get_concept.py
src/tooluniverse/tools/BioPortal_get_hierarchy.py
src/tooluniverse/tools/BioPortal_search_ontology_terms.py
src/tooluniverse/tools/BioRxiv_get_preprint.py
src/tooluniverse/tools/BioRxiv_list_recent_preprints.py
src/tooluniverse/tools/BioSamples_get_sample.py
src/tooluniverse/tools/BioSamples_search.py
src/tooluniverse/tools/BioSamples_search_by_filter.py
src/tooluniverse/tools/BioTools_get_tool.py
src/tooluniverse/tools/BioTools_search.py
src/tooluniverse/tools/BioTools_search_by_operation.py
src/tooluniverse/tools/BioTools_search_by_topic.py
src/tooluniverse/tools/BioTools_search_by_type.py
src/tooluniverse/tools/Bioconductor_get_package.py
src/tooluniverse/tools/Bioconductor_search_packages.py
src/tooluniverse/tools/BiomarkerDiscoveryWorkflow.py
src/tooluniverse/tools/CADD_get_position_scores.py
src/tooluniverse/tools/CADD_get_range_scores.py
src/tooluniverse/tools/CADD_get_variant_score.py
src/tooluniverse/tools/CATH_get_domain_summary.py
src/tooluniverse/tools/CATH_get_superfamily.py
src/tooluniverse/tools/CEDA_search_datasets.py
src/tooluniverse/tools/CELLxGENE_download_h5ad.py
src/tooluniverse/tools/CELLxGENE_get_cell_metadata.py
src/tooluniverse/tools/CELLxGENE_get_census_versions.py
src/tooluniverse/tools/CELLxGENE_get_embeddings.py
src/tooluniverse/tools/CELLxGENE_get_expression_data.py
src/tooluniverse/tools/CELLxGENE_get_gene_metadata.py
src/tooluniverse/tools/CELLxGENE_get_presence_matrix.py
src/tooluniverse/tools/CLUE_get_cell_lines.py
src/tooluniverse/tools/CLUE_get_gene_expression.py
src/tooluniverse/tools/CLUE_get_perturbation.py
src/tooluniverse/tools/CLUE_search_compounds.py
src/tooluniverse/tools/CLUE_search_signatures.py
src/tooluniverse/tools/CMA_Guidelines_Search.py
src/tooluniverse/tools/COD_get_structure.py
src/tooluniverse/tools/COD_search_structures.py
src/tooluniverse/tools/CORE_get_fulltext_snippets.py
src/tooluniverse/tools/CORE_search_papers.py
src/tooluniverse/tools/COSMIC_get_mutations_by_gene.py
src/tooluniverse/tools/COSMIC_search_mutations.py
src/tooluniverse/tools/CPIC_get_alleles.py
src/tooluniverse/tools/CPIC_get_drug_info.py
src/tooluniverse/tools/CPIC_get_gene_drug_pairs.py
src/tooluniverse/tools/CPIC_get_gene_info.py
src/tooluniverse/tools/CPIC_get_recommendations.py
src/tooluniverse/tools/CPIC_list_drugs.py
src/tooluniverse/tools/CPIC_list_guidelines.py
src/tooluniverse/tools/CPIC_list_pgx_genes.py
src/tooluniverse/tools/CPIC_search_gene_drug_pairs.py
src/tooluniverse/tools/CRAN_get_package.py
src/tooluniverse/tools/CRAN_get_package_versions.py
src/tooluniverse/tools/CTD_get_chemical_diseases.py
src/tooluniverse/tools/CTD_get_chemical_gene_interactions.py
src/tooluniverse/tools/CTD_get_disease_chemicals.py
src/tooluniverse/tools/CTD_get_gene_chemicals.py
src/tooluniverse/tools/CTD_get_gene_diseases.py
src/tooluniverse/tools/CTFPHC_list_guidelines.py
src/tooluniverse/tools/CTFPHC_search_guidelines.py
src/tooluniverse/tools/CallAgent.py
src/tooluniverse/tools/CancerPrognosis_get_gene_expression.py
src/tooluniverse/tools/CancerPrognosis_get_study_summary.py
src/tooluniverse/tools/CancerPrognosis_get_survival_data.py
src/tooluniverse/tools/CancerPrognosis_search_studies.py
src/tooluniverse/tools/CellMarker_list_cell_types.py
src/tooluniverse/tools/CellMarker_search_by_cell_type.py
src/tooluniverse/tools/CellMarker_search_by_gene.py
src/tooluniverse/tools/CellMarker_search_cancer_markers.py
src/tooluniverse/tools/CellPainting_get_screen_plates.py
src/tooluniverse/tools/CellPainting_get_well_data.py
src/tooluniverse/tools/CellPainting_search_screens.py
src/tooluniverse/tools/ChEBI_get_compound.py
src/tooluniverse/tools/ChEBI_get_ontology_children.py
src/tooluniverse/tools/ChEBI_search.py
src/tooluniverse/tools/ChEMBL_get_activity.py
src/tooluniverse/tools/ChEMBL_get_assay.py
src/tooluniverse/tools/ChEMBL_get_assay_activities.py
src/tooluniverse/tools/ChEMBL_get_compound_record.py
src/tooluniverse/tools/ChEMBL_get_compound_record_activities.py
src/tooluniverse/tools/ChEMBL_get_drug.py
src/tooluniverse/tools/ChEMBL_get_drug_mechanisms.py
src/tooluniverse/tools/ChEMBL_get_molecule.py
src/tooluniverse/tools/ChEMBL_get_molecule_image.py
src/tooluniverse/tools/ChEMBL_get_molecule_targets.py
src/tooluniverse/tools/ChEMBL_get_target.py
src/tooluniverse/tools/ChEMBL_get_target_activities.py
src/tooluniverse/tools/ChEMBL_get_target_assays.py
src/tooluniverse/tools/ChEMBL_search_activities.py
src/tooluniverse/tools/ChEMBL_search_assays.py
src/tooluniverse/tools/ChEMBL_search_atc_classification.py
src/tooluniverse/tools/ChEMBL_search_binding_sites.py
src/tooluniverse/tools/ChEMBL_search_cell_lines.py
src/tooluniverse/tools/ChEMBL_search_compound_structural_alerts.py
src/tooluniverse/tools/ChEMBL_search_documents.py
src/tooluniverse/tools/ChEMBL_search_drugs.py
src/tooluniverse/tools/ChEMBL_search_mechanisms.py
src/tooluniverse/tools/ChEMBL_search_molecules.py
src/tooluniverse/tools/ChEMBL_search_protein_classification.py
src/tooluniverse/tools/ChEMBL_search_similar_molecules.py
src/tooluniverse/tools/ChEMBL_search_similarity.py
src/tooluniverse/tools/ChEMBL_search_substructure.py
src/tooluniverse/tools/ChEMBL_search_targets.py
src/tooluniverse/tools/ChEMBL_search_tissue.py
src/tooluniverse/tools/ChIPAtlas_enrichment_analysis.py
src/tooluniverse/tools/ChIPAtlas_get_experiments.py
src/tooluniverse/tools/ChIPAtlas_get_peak_data.py
src/tooluniverse/tools/ChIPAtlas_search_datasets.py
src/tooluniverse/tools/ChannelsDB_get_channels_cofactor.py
src/tooluniverse/tools/ChannelsDB_get_channels_pdb.py
src/tooluniverse/tools/Chem_sa_score.py
src/tooluniverse/tools/ClinGenAR_get_external_records.py
src/tooluniverse/tools/ClinGenAR_lookup_allele.py
src/tooluniverse/tools/ClinGen_dosage_by_gene.py
src/tooluniverse/tools/ClinGen_dosage_region_search.py
src/tooluniverse/tools/ClinGen_get_actionability_adult.py
src/tooluniverse/tools/ClinGen_get_actionability_pediatric.py
src/tooluniverse/tools/ClinGen_get_dosage_sensitivity.py
src/tooluniverse/tools/ClinGen_get_gene_validity.py
src/tooluniverse/tools/ClinGen_get_variant_classifications.py
src/tooluniverse/tools/ClinGen_search_actionability.py
src/tooluniverse/tools/ClinGen_search_dosage_sensitivity.py
src/tooluniverse/tools/ClinGen_search_gene_validity.py
src/tooluniverse/tools/ClinVar_search_variants.py
src/tooluniverse/tools/ClinicalTrialDesignAgent.py
src/tooluniverse/tools/ClinicalTrials_get_database_stats.py
src/tooluniverse/tools/ClinicalTrials_get_field_values.py
src/tooluniverse/tools/ClinicalTrials_get_study.py
src/tooluniverse/tools/ClinicalTrials_search_by_intervention.py
src/tooluniverse/tools/ClinicalTrials_search_by_sponsor.py
src/tooluniverse/tools/ClinicalTrials_search_studies.py
src/tooluniverse/tools/CoL_get_children.py
src/tooluniverse/tools/CoL_get_taxon.py
src/tooluniverse/tools/CoL_search_species.py
src/tooluniverse/tools/CodeQualityAnalyzer.py
src/tooluniverse/tools/ComplexPortal_get_complex.py
src/tooluniverse/tools/ComplexPortal_search_complexes.py
src/tooluniverse/tools/CompoundDiscoveryAgent.py
src/tooluniverse/tools/ComprehensiveDrugDiscoveryPipeline.py
src/tooluniverse/tools/Crossref_get_funder.py
src/tooluniverse/tools/Crossref_get_journal.py
src/tooluniverse/tools/Crossref_get_work.py
src/tooluniverse/tools/Crossref_list_funders.py
src/tooluniverse/tools/Crossref_list_types.py
src/tooluniverse/tools/Crossref_search_works.py
src/tooluniverse/tools/CxGDisc_get_collection.py
src/tooluniverse/tools/CxGDisc_list_collections.py
src/tooluniverse/tools/CxGDisc_search_datasets.py
src/tooluniverse/tools/DBLP_search_publications.py
src/tooluniverse/tools/DBpedia_SPARQL_query.py
src/tooluniverse/tools/DGIdb_get_drug_gene_interactions.py
src/tooluniverse/tools/DGIdb_get_drug_info.py
src/tooluniverse/tools/DGIdb_get_gene_druggability.py
src/tooluniverse/tools/DGIdb_get_gene_info.py
src/tooluniverse/tools/DNA_calculate_gc_content.py
src/tooluniverse/tools/DNA_codon_optimize.py
src/tooluniverse/tools/DNA_find_orfs.py
src/tooluniverse/tools/DNA_find_restriction_sites.py
src/tooluniverse/tools/DNA_gibson_design.py
src/tooluniverse/tools/DNA_golden_gate_design.py
src/tooluniverse/tools/DNA_primer_design.py
src/tooluniverse/tools/DNA_reverse_complement.py
src/tooluniverse/tools/DNA_translate_sequence.py
src/tooluniverse/tools/DNA_virtual_digest.py
src/tooluniverse/tools/DOAJ_search_articles.py
src/tooluniverse/tools/DailyMed_get_spl_by_setid.py
src/tooluniverse/tools/DailyMed_parse_adverse_reactions.py
src/tooluniverse/tools/DailyMed_parse_clinical_pharmacology.py
src/tooluniverse/tools/DailyMed_parse_contraindications.py
src/tooluniverse/tools/DailyMed_parse_dosing.py
src/tooluniverse/tools/DailyMed_parse_drug_interactions.py
src/tooluniverse/tools/DailyMed_search_drug_classes.py
src/tooluniverse/tools/DailyMed_search_spls.py
src/tooluniverse/tools/DataAnalysisValidityReviewer.py
src/tooluniverse/tools/DataCite_get_doi.py
src/tooluniverse/tools/DataCite_search_dois.py
src/tooluniverse/tools/DataONE_search_datasets.py
src/tooluniverse/tools/Dataverse_get_dataset.py
src/tooluniverse/tools/Dataverse_search_datasets.py
src/tooluniverse/tools/DeepGO_predict_function.py
src/tooluniverse/tools/DepMap_get_cell_line.py
src/tooluniverse/tools/DepMap_get_cell_lines.py
src/tooluniverse/tools/DepMap_get_gene_dependencies.py
src/tooluniverse/tools/DepMap_search_cell_lines.py
src/tooluniverse/tools/DepMap_search_genes.py
src/tooluniverse/tools/DescriptionAnalyzer.py
src/tooluniverse/tools/DescriptionQualityEvaluator.py
src/tooluniverse/tools/Dfam_get_annotations.py
src/tooluniverse/tools/Dfam_get_family.py
src/tooluniverse/tools/Dfam_search_families.py
src/tooluniverse/tools/DisGeNET_get_disease_genes.py
src/tooluniverse/tools/DisGeNET_get_gda.py
src/tooluniverse/tools/DisGeNET_get_vda.py
src/tooluniverse/tools/DisGeNET_search_disease.py
src/tooluniverse/tools/DisGeNET_search_gene.py
src/tooluniverse/tools/DisProt_get_entry.py
src/tooluniverse/tools/DisProt_search.py
src/tooluniverse/tools/DiseaseAnalyzerAgent.py
src/tooluniverse/tools/DiseaseOntology_get_parents.py
src/tooluniverse/tools/DiseaseOntology_get_term.py
src/tooluniverse/tools/DiseaseSH_get_covid_historical.py
src/tooluniverse/tools/DiseaseSH_get_vaccine_coverage.py
src/tooluniverse/tools/DiseaseSh_get_country_stats.py
src/tooluniverse/tools/DiseaseSh_get_global_stats.py
src/tooluniverse/tools/DiseaseSh_get_historical.py
src/tooluniverse/tools/DomainExpertValidator.py
src/tooluniverse/tools/DoseResponse_calculate_ic50.py
src/tooluniverse/tools/DoseResponse_compare_potency.py
src/tooluniverse/tools/DoseResponse_fit_curve.py
src/tooluniverse/tools/DrugInteractionAnalyzerAgent.py
src/tooluniverse/tools/DrugOptimizationAgent.py
src/tooluniverse/tools/DrugSafetyAnalyzer.py
src/tooluniverse/tools/DrugSynergy_calculate_bliss.py
src/tooluniverse/tools/DrugSynergy_calculate_ci.py
src/tooluniverse/tools/DrugSynergy_calculate_hsa.py
src/tooluniverse/tools/DrugSynergy_calculate_loewe.py
src/tooluniverse/tools/DrugSynergy_calculate_zip.py
src/tooluniverse/tools/Dryad_get_dataset.py
src/tooluniverse/tools/Dryad_get_dataset_files.py
src/tooluniverse/tools/Dryad_search_datasets.py
src/tooluniverse/tools/EBIProteins_get_antigen.py
src/tooluniverse/tools/EBIProteins_get_coordinate_mapping.py
src/tooluniverse/tools/EBIProteins_get_coordinates.py
src/tooluniverse/tools/EBIProteins_get_domains_sites.py
src/tooluniverse/tools/EBIProteins_get_epitopes.py
src/tooluniverse/tools/EBIProteins_get_features.py
src/tooluniverse/tools/EBIProteins_get_interaction_details.py
src/tooluniverse/tools/EBIProteins_get_interactions.py
src/tooluniverse/tools/EBIProteins_get_molecule_processing.py
src/tooluniverse/tools/EBIProteins_get_mutagenesis.py
src/tooluniverse/tools/EBIProteins_get_proteomics_peptides.py
src/tooluniverse/tools/EBIProteins_get_proteomics_ptm.py
src/tooluniverse/tools/EBIProteins_get_structural_features.py
src/tooluniverse/tools/EBIProteins_get_variation.py
src/tooluniverse/tools/EBITaxonomy_get_by_id.py
src/tooluniverse/tools/EBITaxonomy_get_by_scientific_name.py
src/tooluniverse/tools/EBITaxonomy_search_by_name.py
src/tooluniverse/tools/EBITaxonomy_suggest.py
src/tooluniverse/tools/ELIXIRTeSS_search_events.py
src/tooluniverse/tools/ELIXIRTeSS_search_materials.py
src/tooluniverse/tools/EMDB_get_imaging_info.py
src/tooluniverse/tools/EMDB_get_map_info.py
src/tooluniverse/tools/EMDB_get_publications.py
src/tooluniverse/tools/EMDB_get_sample_info.py
src/tooluniverse/tools/EMDB_get_structure.py
src/tooluniverse/tools/EMDB_get_validation.py
src/tooluniverse/tools/EMDB_search_structures.py
src/tooluniverse/tools/ENAPortal_count_records.py
src/tooluniverse/tools/ENAPortal_search_samples.py
src/tooluniverse/tools/ENAPortal_search_studies.py
src/tooluniverse/tools/ENCODE_get_biosample.py
src/tooluniverse/tools/ENCODE_get_chromatin_state.py
src/tooluniverse/tools/ENCODE_get_experiment.py
src/tooluniverse/tools/ENCODE_get_file.py
src/tooluniverse/tools/ENCODE_list_files.py
src/tooluniverse/tools/ENCODE_search_annotations.py
src/tooluniverse/tools/ENCODE_search_biosamples.py
src/tooluniverse/tools/ENCODE_search_chromatin_accessibility.py
src/tooluniverse/tools/ENCODE_search_experiments.py
src/tooluniverse/tools/ENCODE_search_histone_experiments.py
src/tooluniverse/tools/ENCODE_search_methylation_experiments.py
src/tooluniverse/tools/EOL_get_collection.py
src/tooluniverse/tools/EOL_get_hierarchy_entry.py
src/tooluniverse/tools/EOL_get_page.py
src/tooluniverse/tools/EOL_search_species.py
src/tooluniverse/tools/EPMC_get_citations.py
src/tooluniverse/tools/EPMC_get_references.py
src/tooluniverse/tools/ERDDAP_get_dataset_info.py
src/tooluniverse/tools/ERDDAP_search_datasets.py
src/tooluniverse/tools/EVA_get_variants_by_gene.py
src/tooluniverse/tools/EVA_get_variants_by_region.py
src/tooluniverse/tools/EVA_list_studies.py
src/tooluniverse/tools/EVE_get_gene_info.py
src/tooluniverse/tools/EVE_get_variant_score.py
src/tooluniverse/tools/Enamine_get_compound.py
src/tooluniverse/tools/Enamine_get_libraries.py
src/tooluniverse/tools/Enamine_search_catalog.py
src/tooluniverse/tools/Enamine_search_smiles.py
src/tooluniverse/tools/EnsemblArchive_batch_lookup.py
src/tooluniverse/tools/EnsemblArchive_get_id_history.py
src/tooluniverse/tools/EnsemblCompara_get_gene_tree.py
src/tooluniverse/tools/EnsemblCompara_get_orthologues.py
src/tooluniverse/tools/EnsemblCompara_get_paralogues.py
src/tooluniverse/tools/EnsemblLD_get_ld_pairwise.py
src/tooluniverse/tools/EnsemblLD_get_ld_variants.py
src/tooluniverse/tools/EnsemblMap_convert_coordinates.py
src/tooluniverse/tools/EnsemblMap_translate_coordinates.py
src/tooluniverse/tools/EnsemblPheno_get_by_gene.py
src/tooluniverse/tools/EnsemblPheno_get_by_region.py
src/tooluniverse/tools/EnsemblPheno_get_by_variant.py
src/tooluniverse/tools/EnsemblReg_get_binding_matrix.py
src/tooluniverse/tools/EnsemblReg_get_constrained_elements.py
src/tooluniverse/tools/EnsemblReg_get_motif_features.py
src/tooluniverse/tools/EnsemblReg_get_regulatory_elements.py
src/tooluniverse/tools/EnsemblSeq_get_id_sequence.py
src/tooluniverse/tools/EnsemblSeq_get_region_sequence.py
src/tooluniverse/tools/EnsemblVEP_annotate_hgvs.py
src/tooluniverse/tools/EnsemblVEP_annotate_rsid.py
src/tooluniverse/tools/EnsemblVEP_variant_recoder.py
src/tooluniverse/tools/EnsemblVar_get_population_frequencies.py
src/tooluniverse/tools/EnsemblVar_get_variant_consequences.py
src/tooluniverse/tools/Ensembl_get_assembly_info.py
src/tooluniverse/tools/Ensembl_get_cross_references.py
src/tooluniverse/tools/Ensembl_get_gene_overlapping_features.py
src/tooluniverse/tools/Ensembl_get_region_features.py
src/tooluniverse/tools/Ensembl_get_species_info.py
src/tooluniverse/tools/Ensembl_lookup_gene_by_symbol.py
src/tooluniverse/tools/EpiGraphDB_get_drugs_for_trait.py
src/tooluniverse/tools/EpiGraphDB_get_gene_drug_associations.py
src/tooluniverse/tools/EpiGraphDB_get_genetic_correlations.py
src/tooluniverse/tools/EpiGraphDB_get_mendelian_randomization.py
src/tooluniverse/tools/EpiGraphDB_map_gwas_to_efo.py
src/tooluniverse/tools/EpiGraphDB_search_gene.py
src/tooluniverse/tools/EpiGraphDB_search_opengwas.py
src/tooluniverse/tools/EthicalComplianceReviewer.py
src/tooluniverse/tools/EuroPMCAnnot_get_annotations_by_type.py
src/tooluniverse/tools/EuroPMCAnnot_get_article_annotations.py
src/tooluniverse/tools/EuroPMCAnnot_get_chemicals_from_article.py
src/tooluniverse/tools/EuropePMC_Guidelines_Search.py
src/tooluniverse/tools/EuropePMC_get_citations.py
src/tooluniverse/tools/EuropePMC_get_fulltext.py
src/tooluniverse/tools/EuropePMC_get_fulltext_snippets.py
src/tooluniverse/tools/EuropePMC_get_references.py
src/tooluniverse/tools/EuropePMC_search_articles.py
src/tooluniverse/tools/Eurostat_get_dataset.py
src/tooluniverse/tools/ExperimentalDesignScorer.py
src/tooluniverse/tools/ExpressionAtlas_get_baseline.py
src/tooluniverse/tools/ExpressionAtlas_get_experiment.py
src/tooluniverse/tools/ExpressionAtlas_search_differential.py
src/tooluniverse/tools/ExpressionAtlas_search_experiments.py
src/tooluniverse/tools/FAERS_analyze_temporal_trends.py
src/tooluniverse/tools/FAERS_calculate_disproportionality.py
src/tooluniverse/tools/FAERS_compare_drugs.py
src/tooluniverse/tools/FAERS_count_additive_administration_routes.py
src/tooluniverse/tools/FAERS_count_additive_adverse_reactions.py
src/tooluniverse/tools/FAERS_count_additive_event_reports_by_country.py
src/tooluniverse/tools/FAERS_count_additive_reaction_outcomes.py
src/tooluniverse/tools/FAERS_count_additive_reports_by_reporter_country.py
src/tooluniverse/tools/FAERS_count_additive_seriousness_classification.py
src/tooluniverse/tools/FAERS_count_country_by_drug_event.py
src/tooluniverse/tools/FAERS_count_death_related_by_drug.py
src/tooluniverse/tools/FAERS_count_drug_routes_by_event.py
src/tooluniverse/tools/FAERS_count_drugs_by_drug_event.py
src/tooluniverse/tools/FAERS_count_outcomes_by_drug_event.py
src/tooluniverse/tools/FAERS_count_patient_age_distribution.py
src/tooluniverse/tools/FAERS_count_reactions_by_drug_event.py
src/tooluniverse/tools/FAERS_count_reportercountry_by_drug_event.py
src/tooluniverse/tools/FAERS_count_seriousness_by_drug_event.py
src/tooluniverse/tools/FAERS_filter_serious_events.py
src/tooluniverse/tools/FAERS_rollup_meddra_hierarchy.py
src/tooluniverse/tools/FAERS_search_adverse_event_reports.py
src/tooluniverse/tools/FAERS_search_reports_by_drug_and_indication.py
src/tooluniverse/tools/FAERS_search_reports_by_drug_and_outcome.py
src/tooluniverse/tools/FAERS_search_reports_by_drug_and_reaction.py
src/tooluniverse/tools/FAERS_search_reports_by_drug_combination.py
src/tooluniverse/tools/FAERS_search_serious_reports_by_drug.py
src/tooluniverse/tools/FAERS_stratify_by_demographics.py
src/tooluniverse/tools/FDA_OrangeBook_check_generic_availability.py
src/tooluniverse/tools/FDA_OrangeBook_get_approval_history.py
src/tooluniverse/tools/FDA_OrangeBook_get_exclusivity.py
src/tooluniverse/tools/FDA_OrangeBook_get_patent_info.py
src/tooluniverse/tools/FDA_OrangeBook_get_te_code.py
src/tooluniverse/tools/FDA_OrangeBook_search_drug.py
src/tooluniverse/tools/FDA_get_DEA_schedule_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_abuse_dependence_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_abuse_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_accessories_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_active_ingredient_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_adverse_reactions_by_drug_name.py
src/tooluniverse/tools/FDA_get_alarms_by_drug_name.py
src/tooluniverse/tools/FDA_get_animal_pharmacology_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_assembly_installation_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_boxed_warning_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_brand_name_generic_name.py
src/tooluniverse/tools/FDA_get_carcinogenic_mutagenic_fertility_by_drug_name.py
src/tooluniverse/tools/FDA_get_child_safety_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_clinical_pharmacology_by_drug_name.py
src/tooluniverse/tools/FDA_get_clinical_studies_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_conditions_info_for_doctor_consult_by_drug_name.py
src/tooluniverse/tools/FDA_get_consulting_doctor_pharmacist_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_contact_for_questions_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_contraindications_by_drug_name.py
src/tooluniverse/tools/FDA_get_dependence_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_dhcp_letter_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_disposal_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_do_not_use_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_document_id_by_drug_name.py
src/tooluniverse/tools/FDA_get_dosage_and_storage_information_by_drug_name.py
src/tooluniverse/tools/FDA_get_dosage_forms_and_strengths_by_drug_name.py
src/tooluniverse/tools/FDA_get_drug_generic_name.py
src/tooluniverse/tools/FDA_get_drug_interactions_by_drug_name.py
src/tooluniverse/tools/FDA_get_drug_label.py
src/tooluniverse/tools/FDA_get_drug_label_info_by_field_value.py
src/tooluniverse/tools/FDA_get_drug_name_by_SPL_ID.py
src/tooluniverse/tools/FDA_get_drug_name_by_adverse_reaction.py
src/tooluniverse/tools/FDA_get_drug_name_by_conditions_for_doctor_consult.py
src/tooluniverse/tools/FDA_get_drug_name_by_dependence_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_document_id.py
src/tooluniverse/tools/FDA_get_drug_name_by_dosage_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_environmental_warning.py
src/tooluniverse/tools/FDA_get_drug_name_by_inactive_ingredient.py
src/tooluniverse/tools/FDA_get_drug_name_by_labor_and_delivery_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_microbiology.py
src/tooluniverse/tools/FDA_get_drug_name_by_other_safety_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_pharmacodynamics.py
src/tooluniverse/tools/FDA_get_drug_name_by_pharmacogenomics.py
src/tooluniverse/tools/FDA_get_drug_name_by_precautions.py
src/tooluniverse/tools/FDA_get_drug_name_by_pregnancy_or_breastfeeding_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_principal_display_panel.py
src/tooluniverse/tools/FDA_get_drug_name_by_reference.py
src/tooluniverse/tools/FDA_get_drug_name_by_set_id.py
src/tooluniverse/tools/FDA_get_drug_name_by_stop_use_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_storage_and_handling_info.py
src/tooluniverse/tools/FDA_get_drug_name_by_warnings.py
src/tooluniverse/tools/FDA_get_drug_name_from_patient_package_insert.py
src/tooluniverse/tools/FDA_get_drug_names_by_abuse_dependence_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_abuse_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_accessories.py
src/tooluniverse/tools/FDA_get_drug_names_by_active_ingredient.py
src/tooluniverse/tools/FDA_get_drug_names_by_alarm.py
src/tooluniverse/tools/FDA_get_drug_names_by_animal_pharmacology_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_application_number_NDC_number.py
src/tooluniverse/tools/FDA_get_drug_names_by_assembly_installation_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_boxed_warning.py
src/tooluniverse/tools/FDA_get_drug_names_by_child_safety_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_clinical_pharmacology.py
src/tooluniverse/tools/FDA_get_drug_names_by_clinical_studies.py
src/tooluniverse/tools/FDA_get_drug_names_by_consulting_doctor_pharmacist_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_contraindications.py
src/tooluniverse/tools/FDA_get_drug_names_by_controlled_substance_DEA_schedule.py
src/tooluniverse/tools/FDA_get_drug_names_by_dhcp_letter_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_disposal_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_dosage_forms_and_strengths_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_drug_interactions.py
src/tooluniverse/tools/FDA_get_drug_names_by_effective_time.py
src/tooluniverse/tools/FDA_get_drug_names_by_food_safety_warnings.py
src/tooluniverse/tools/FDA_get_drug_names_by_general_precautions.py
src/tooluniverse/tools/FDA_get_drug_names_by_geriatric_use.py
src/tooluniverse/tools/FDA_get_drug_names_by_health_claim.py
src/tooluniverse/tools/FDA_get_drug_names_by_indication.py
src/tooluniverse/tools/FDA_get_drug_names_by_indication_aggregated.py
src/tooluniverse/tools/FDA_get_drug_names_by_indication_stats.py
src/tooluniverse/tools/FDA_get_drug_names_by_info_for_nursing_mothers.py
src/tooluniverse/tools/FDA_get_drug_names_by_info_for_owner_or_caregiver.py
src/tooluniverse/tools/FDA_get_drug_names_by_ingredient.py
src/tooluniverse/tools/FDA_get_drug_names_by_instructions_for_use.py
src/tooluniverse/tools/FDA_get_drug_names_by_lab_test_interference.py
src/tooluniverse/tools/FDA_get_drug_names_by_lab_tests.py
src/tooluniverse/tools/FDA_get_drug_names_by_mechanism_of_action.py
src/tooluniverse/tools/FDA_get_drug_names_by_medication_guide.py
src/tooluniverse/tools/FDA_get_drug_names_by_nonclinical_toxicology_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_nonteratogenic_effects.py
src/tooluniverse/tools/FDA_get_drug_names_by_overdosage_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_pediatric_use.py
src/tooluniverse/tools/FDA_get_drug_names_by_pharmacokinetics.py
src/tooluniverse/tools/FDA_get_drug_names_by_population_use.py
src/tooluniverse/tools/FDA_get_drug_names_by_pregnancy_effects_info.py
src/tooluniverse/tools/FDA_get_drug_names_by_residue_warning.py
src/tooluniverse/tools/FDA_get_drug_names_by_risk.py
src/tooluniverse/tools/FDA_get_drug_names_by_route.py
src/tooluniverse/tools/FDA_get_drug_names_by_safe_handling_warning.py
src/tooluniverse/tools/FDA_get_drug_names_by_safety_summary.py
src/tooluniverse/tools/FDA_get_drug_names_by_spl_indexing_data_elements.py
src/tooluniverse/tools/FDA_get_drug_names_by_teratogenic_effects.py
src/tooluniverse/tools/FDA_get_drug_names_by_user_safety_warning.py
src/tooluniverse/tools/FDA_get_drug_names_by_warnings_and_cautions.py
src/tooluniverse/tools/FDA_get_drugs_by_carcinogenic_mutagenic_fertility.py
src/tooluniverse/tools/FDA_get_effective_time_by_drug_name.py
src/tooluniverse/tools/FDA_get_environmental_warning_by_drug_name.py
src/tooluniverse/tools/FDA_get_general_precautions_by_drug_name.py
src/tooluniverse/tools/FDA_get_geriatric_use_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_health_claims_by_drug_name.py
src/tooluniverse/tools/FDA_get_inactive_ingredient_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_indications_by_drug_name.py
src/tooluniverse/tools/FDA_get_info_for_nursing_mothers_by_drug_name.py
src/tooluniverse/tools/FDA_get_info_for_owner_caregiver_by_drug_name.py
src/tooluniverse/tools/FDA_get_info_for_patients_by_drug_name.py
src/tooluniverse/tools/FDA_get_ingredients_by_drug_name.py
src/tooluniverse/tools/FDA_get_instructions_for_use_by_drug_name.py
src/tooluniverse/tools/FDA_get_lab_test_interference_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_lab_tests_by_drug_name.py
src/tooluniverse/tools/FDA_get_labor_and_delivery_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_manufacturer_name_NDC_number_by_drug_name.py
src/tooluniverse/tools/FDA_get_mechanism_of_action_by_drug_name.py
src/tooluniverse/tools/FDA_get_medication_guide_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_microbiology_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_nonclinical_toxicology_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_nonteratogenic_effects_by_drug_name.py
src/tooluniverse/tools/FDA_get_other_safety_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_overdosage_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_patient_package_insert_from_drug_name.py
src/tooluniverse/tools/FDA_get_pediatric_use_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_pharmacodynamics_by_drug_name.py
src/tooluniverse/tools/FDA_get_pharmacogenomics_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_pharmacokinetics_by_drug_name.py
src/tooluniverse/tools/FDA_get_population_use_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_precautions_by_drug_name.py
src/tooluniverse/tools/FDA_get_pregnancy_effects_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_pregnancy_or_breastfeeding_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_principal_display_panel_by_drug_name.py
src/tooluniverse/tools/FDA_get_purpose_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_recent_changes_by_drug_name.py
src/tooluniverse/tools/FDA_get_reference_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_risk_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_route_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_safe_handling_warnings_by_drug_name.py
src/tooluniverse/tools/FDA_get_safety_summary_by_drug_name.py
src/tooluniverse/tools/FDA_get_spl_indexing_data_elements_by_drug_name.py
src/tooluniverse/tools/FDA_get_spl_unclassified_section_by_drug_name.py
src/tooluniverse/tools/FDA_get_stop_use_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_storage_and_handling_info_by_drug_name.py
src/tooluniverse/tools/FDA_get_teratogenic_effects_by_drug_name.py
src/tooluniverse/tools/FDA_get_user_safety_warning_by_drug_names.py
src/tooluniverse/tools/FDA_get_warnings_and_cautions_by_drug_name.py
src/tooluniverse/tools/FDA_get_warnings_by_drug_name.py
src/tooluniverse/tools/FDA_get_when_using_info.py
src/tooluniverse/tools/FDA_list_drug_classes.py
src/tooluniverse/tools/FDA_retrieve_device_use_by_drug_name.py
src/tooluniverse/tools/FDA_retrieve_drug_name_by_device_use.py
src/tooluniverse/tools/FDA_retrieve_drug_names_by_patient_medication_info.py
src/tooluniverse/tools/FDA_retrieve_patient_medication_info_by_drug_name.py
src/tooluniverse/tools/FDA_search_drug_labels.py
src/tooluniverse/tools/FPbase_get_protein.py
src/tooluniverse/tools/FPbase_search_by_spectrum.py
src/tooluniverse/tools/Fatcat_search_scholar.py
src/tooluniverse/tools/Figshare_get_article.py
src/tooluniverse/tools/Figshare_search_articles.py
src/tooluniverse/tools/Finish.py
src/tooluniverse/tools/FlyBase_get_gene.py
src/tooluniverse/tools/FlyBase_get_gene_alleles.py
src/tooluniverse/tools/FlyBase_get_gene_disease_models.py
src/tooluniverse/tools/FlyBase_get_gene_expression.py
src/tooluniverse/tools/FlyBase_get_gene_interactions.py
src/tooluniverse/tools/FlyBase_get_gene_orthologs.py
src/tooluniverse/tools/FlyMine_search.py
src/tooluniverse/tools/FlyMine_search_genes.py
src/tooluniverse/tools/FoodDataCentral_get_food.py
src/tooluniverse/tools/FoodDataCentral_search_foods.py
src/tooluniverse/tools/FourDN_get_download_url.py
src/tooluniverse/tools/FourDN_get_experiment_metadata.py
src/tooluniverse/tools/FourDN_get_file_metadata.py
src/tooluniverse/tools/FourDN_search_data.py
src/tooluniverse/tools/G2P_get_gene.py
src/tooluniverse/tools/G2P_get_panel.py
src/tooluniverse/tools/G2P_get_record.py
src/tooluniverse/tools/G2P_search.py
src/tooluniverse/tools/GBIF_get_species.py
src/tooluniverse/tools/GBIF_search_occurrences.py
src/tooluniverse/tools/GBIF_search_species.py
src/tooluniverse/tools/GBIF_suggest_species.py
src/tooluniverse/tools/GDC_get_cnv_data.py
src/tooluniverse/tools/GDC_get_gene_expression.py
src/tooluniverse/tools/GDC_get_mutation_frequency.py
src/tooluniverse/tools/GDC_get_ssm_by_gene.py
src/tooluniverse/tools/GDC_list_files.py
src/tooluniverse/tools/GDC_list_projects.py
src/tooluniverse/tools/GDC_search_cases.py
src/tooluniverse/tools/GEO_get_dataset_details.py
src/tooluniverse/tools/GEO_search_chipseq_datasets.py
src/tooluniverse/tools/GEO_search_methylation_datasets.py
src/tooluniverse/tools/GIN_Guidelines_Search.py
src/tooluniverse/tools/GNPS_compare_spectra.py
src/tooluniverse/tools/GNPS_get_spectrum.py
src/tooluniverse/tools/GOAPI_get_gene_functions.py
src/tooluniverse/tools/GOAPI_get_genes_by_function.py
src/tooluniverse/tools/GOAPI_get_term.py
src/tooluniverse/tools/GO_get_annotations_for_gene.py
src/tooluniverse/tools/GO_get_genes_for_term.py
src/tooluniverse/tools/GO_get_term_by_id.py
src/tooluniverse/tools/GO_get_term_details.py
src/tooluniverse/tools/GO_search_terms.py
src/tooluniverse/tools/GPCRdb_get_ligands.py
src/tooluniverse/tools/GPCRdb_get_mutations.py
src/tooluniverse/tools/GPCRdb_get_protein.py
src/tooluniverse/tools/GPCRdb_get_structures.py
src/tooluniverse/tools/GPCRdb_list_proteins.py
src/tooluniverse/tools/GTEx_calculate_eqtl.py
src/tooluniverse/tools/GTEx_get_dataset_info.py
src/tooluniverse/tools/GTEx_get_eqtl_genes.py
src/tooluniverse/tools/GTEx_get_expression_summary.py
src/tooluniverse/tools/GTEx_get_gene_expression.py
src/tooluniverse/tools/GTEx_get_median_gene_expression.py
src/tooluniverse/tools/GTEx_get_multi_tissue_eqtls.py
src/tooluniverse/tools/GTEx_get_sample_info.py
src/tooluniverse/tools/GTEx_get_single_tissue_eqtls.py
src/tooluniverse/tools/GTEx_get_tissue_sites.py
src/tooluniverse/tools/GTEx_get_top_expressed_genes.py
src/tooluniverse/tools/GTEx_query_eqtl.py
src/tooluniverse/tools/GWAS_search_associations_by_gene.py
src/tooluniverse/tools/GeneNetwork_get_dataset_info.py
src/tooluniverse/tools/GeneNetwork_get_sample_data.py
src/tooluniverse/tools/GeneNetwork_get_trait_info.py
src/tooluniverse/tools/GeneNetwork_list_datasets.py
src/tooluniverse/tools/GeneNetwork_list_groups.py
src/tooluniverse/tools/GeneNetwork_list_species.py
src/tooluniverse/tools/GenomeNexus_annotate_mutation.py
src/tooluniverse/tools/GenomeNexus_annotate_variant.py
src/tooluniverse/tools/GenomeNexus_get_cancer_hotspots.py
src/tooluniverse/tools/GenomeNexus_get_canonical_transcript.py
src/tooluniverse/tools/GitHub_get_repository.py
src/tooluniverse/tools/GitHub_get_user_profile.py
src/tooluniverse/tools/GitHub_search_repositories.py
src/tooluniverse/tools/GlyGen_get_glycan.py
src/tooluniverse/tools/GlyGen_get_glycoprotein.py
src/tooluniverse/tools/GlyGen_get_site.py
src/tooluniverse/tools/GlyGen_search_glycans.py
src/tooluniverse/tools/GlyGen_search_glycoproteins.py
src/tooluniverse/tools/GtoPdb_get_interactions.py
src/tooluniverse/tools/GtoPdb_search_ligands.py
src/tooluniverse/tools/GtoPdb_search_targets.py
src/tooluniverse/tools/GxA_get_experiment_expression.py
src/tooluniverse/tools/GxA_get_experiment_info.py
src/tooluniverse/tools/GxA_list_experiments.py
src/tooluniverse/tools/HAL_search_archive.py
src/tooluniverse/tools/HGNC_fetch_gene_by_id.py
src/tooluniverse/tools/HGNC_fetch_gene_by_symbol.py
src/tooluniverse/tools/HGNC_search_by_location.py
src/tooluniverse/tools/HGNC_search_genes.py
src/tooluniverse/tools/HMDB_get_diseases.py
src/tooluniverse/tools/HMDB_get_metabolite.py
src/tooluniverse/tools/HMDB_search.py
src/tooluniverse/tools/HPA_generic_search.py
src/tooluniverse/tools/HPA_get_biological_processes_by_gene.py
src/tooluniverse/tools/HPA_get_cancer_prognostics_by_gene.py
src/tooluniverse/tools/HPA_get_comparative_expression_by_gene_and_cellline.py
src/tooluniverse/tools/HPA_get_comprehensive_gene_details_by_ensembl_id.py
src/tooluniverse/tools/HPA_get_contextual_biological_process_analysis.py
src/tooluniverse/tools/HPA_get_disease_expression_by_gene_tissue_disease.py
src/tooluniverse/tools/HPA_get_gene_basic_info_by_ensembl_id.py
src/tooluniverse/tools/HPA_get_gene_tsv_data_by_ensembl_id.py
src/tooluniverse/tools/HPA_get_protein_interactions_by_gene.py
src/tooluniverse/tools/HPA_get_rna_expression_by_source.py
src/tooluniverse/tools/HPA_get_rna_expression_in_specific_tissues.py
src/tooluniverse/tools/HPA_get_subcellular_location.py
src/tooluniverse/tools/HPA_search_genes_by_query.py
src/tooluniverse/tools/HPO_get_term.py
src/tooluniverse/tools/HPO_get_term_hierarchy.py
src/tooluniverse/tools/HPO_search_terms.py
src/tooluniverse/tools/Harmonizome_get_gene.py
src/tooluniverse/tools/Harmonizome_list_datasets.py
src/tooluniverse/tools/HuggingFace_get_model.py
src/tooluniverse/tools/HuggingFace_search_datasets.py
src/tooluniverse/tools/HuggingFace_search_models.py
src/tooluniverse/tools/HumanMine_search.py
src/tooluniverse/tools/HumanMine_search_genes.py
src/tooluniverse/tools/HumanMine_search_pathways.py
src/tooluniverse/tools/HypothesisGenerator.py
src/tooluniverse/tools/ICD10_get_code_info.py
src/tooluniverse/tools/ICD10_search_codes.py
src/tooluniverse/tools/ICD11_browse_hierarchy.py
src/tooluniverse/tools/ICD11_get_entity.py
src/tooluniverse/tools/ICD11_search_diseases.py
src/tooluniverse/tools/IDR_get_study.py
src/tooluniverse/tools/IDR_get_study_datasets.py
src/tooluniverse/tools/IDR_list_studies.py
src/tooluniverse/tools/IDT_analyze_oligo.py
src/tooluniverse/tools/IDT_check_self_dimer.py
src/tooluniverse/tools/IMGT_get_gene_info.py
src/tooluniverse/tools/IMGT_get_sequence.py
src/tooluniverse/tools/IMGT_search_genes.py
src/tooluniverse/tools/IMPC_get_gene_phenotype_hits.py
src/tooluniverse/tools/IMPC_get_gene_summary.py
src/tooluniverse/tools/IMPC_get_phenotypes_by_gene.py
src/tooluniverse/tools/IMPC_search_genes.py
src/tooluniverse/tools/ITIS_get_full_record.py
src/tooluniverse/tools/ITIS_get_hierarchy.py
src/tooluniverse/tools/ITIS_search_by_common_name.py
src/tooluniverse/tools/ITIS_search_by_scientific_name.py
src/tooluniverse/tools/IdentifiersOrg_get_namespace.py
src/tooluniverse/tools/IdentifiersOrg_list_namespaces.py
src/tooluniverse/tools/IdentifiersOrg_resolve.py
src/tooluniverse/tools/IdentifiersOrg_search_namespaces.py
src/tooluniverse/tools/InspireHEP_search_papers.py
src/tooluniverse/tools/IntOGen_get_drivers.py
src/tooluniverse/tools/IntOGen_get_gene_info.py
src/tooluniverse/tools/IntOGen_list_cancer_types.py
src/tooluniverse/tools/IntOGen_list_cohorts.py
src/tooluniverse/tools/IntentAnalyzerAgent.py
src/tooluniverse/tools/InterProScan_get_job_results.py
src/tooluniverse/tools/InterProScan_get_job_status.py
src/tooluniverse/tools/InterProScan_scan_sequence.py
src/tooluniverse/tools/InterPro_get_clan_members.py
src/tooluniverse/tools/InterPro_get_domain_details.py
src/tooluniverse/tools/InterPro_get_entries_for_protein.py
src/tooluniverse/tools/InterPro_get_protein_domain_architecture.py
src/tooluniverse/tools/InterPro_get_protein_domains.py
src/tooluniverse/tools/InterPro_get_proteins_by_domain.py
src/tooluniverse/tools/InterPro_get_structures_for_domain.py
src/tooluniverse/tools/InterPro_search_domains.py
src/tooluniverse/tools/InterPro_search_entries.py
src/tooluniverse/tools/JASPAR_get_transcription_factors.py
src/tooluniverse/tools/JPLHorizons_get_body_data.py
src/tooluniverse/tools/JPLHorizons_lookup_object.py
src/tooluniverse/tools/KEGG_get_brite_hierarchy.py
src/tooluniverse/tools/KEGG_get_compound.py
src/tooluniverse/tools/KEGG_get_gene_pathways.py
src/tooluniverse/tools/KEGG_get_pathway_genes.py
src/tooluniverse/tools/KEGG_list_brite_hierarchies.py
src/tooluniverse/tools/KLIFS_get_kinase.py
src/tooluniverse/tools/KLIFS_get_ligands.py
src/tooluniverse/tools/KLIFS_get_structures.py
src/tooluniverse/tools/KLIFS_get_structures_by_pdb.py
src/tooluniverse/tools/KLIFS_list_kinases.py
src/tooluniverse/tools/KeywordExtractorAgent.py
src/tooluniverse/tools/L1000FWD_sig_search.py
src/tooluniverse/tools/LNCipedia_get_lncrna.py
src/tooluniverse/tools/LNCipedia_get_lncrna_publications.py
src/tooluniverse/tools/LNCipedia_get_lncrna_xrefs.py
src/tooluniverse/tools/LNCipedia_search_lncrna.py
src/tooluniverse/tools/LNCipedia_search_ncrna_by_type.py
src/tooluniverse/tools/LOINC_get_answer_list.py
src/tooluniverse/tools/LOINC_get_code_details.py
src/tooluniverse/tools/LOINC_search_forms.py
src/tooluniverse/tools/LOINC_search_tests.py
src/tooluniverse/tools/LOTUS_get_compound.py
src/tooluniverse/tools/LOTUS_search_by_inchikey.py
src/tooluniverse/tools/LOTUS_search_natural_products.py
src/tooluniverse/tools/LabelGenerator.py
src/tooluniverse/tools/LipidMaps_get_compound_by_id.py
src/tooluniverse/tools/LipidMaps_search_by_formula.py
src/tooluniverse/tools/LipidMaps_search_by_name.py
src/tooluniverse/tools/LitVar_get_variant_publications.py
src/tooluniverse/tools/LitVar_search_variants.py
src/tooluniverse/tools/LiteratureContextReviewer.py
src/tooluniverse/tools/LiteratureSearchTool.py
src/tooluniverse/tools/LiteratureSynthesisAgent.py
src/tooluniverse/tools/MAGICapp_get_guideline.py
src/tooluniverse/tools/MAGICapp_get_recommendations.py
src/tooluniverse/tools/MAGICapp_get_sections.py
src/tooluniverse/tools/MAGICapp_list_guidelines.py
src/tooluniverse/tools/MEME_discover_motifs.py
src/tooluniverse/tools/MEME_fimo_scan.py
src/tooluniverse/tools/MEME_list_databases.py
src/tooluniverse/tools/MEME_tomtom_compare.py
src/tooluniverse/tools/MGnify_get_genome.py
src/tooluniverse/tools/MGnify_get_study_detail.py
src/tooluniverse/tools/MGnify_list_analyses.py
src/tooluniverse/tools/MGnify_list_biomes.py
src/tooluniverse/tools/MGnify_search_genomes.py
src/tooluniverse/tools/MGnify_search_studies.py
src/tooluniverse/tools/MIBiG_get_stats.py
src/tooluniverse/tools/MIBiG_list_clusters.py
src/tooluniverse/tools/MPD_get_phenotype_data.py
src/tooluniverse/tools/MSigDB_get_geneset.py
src/tooluniverse/tools/MSigDB_get_hallmark_geneset.py
src/tooluniverse/tools/MarineRegions_get_record.py
src/tooluniverse/tools/MarineRegions_search_by_name.py
src/tooluniverse/tools/MassBank_search_by_compound.py
src/tooluniverse/tools/MassBank_search_by_formula.py
src/tooluniverse/tools/Mcule_get_compound.py
src/tooluniverse/tools/Mcule_get_database.py
src/tooluniverse/tools/Mcule_list_databases.py
src/tooluniverse/tools/Mcule_lookup_compound.py
src/tooluniverse/tools/MeSH_get_descriptor.py
src/tooluniverse/tools/MeSH_search_descriptors.py
src/tooluniverse/tools/MeSH_search_terms.py
src/tooluniverse/tools/MedRxiv_get_preprint.py
src/tooluniverse/tools/MedicalLiteratureReviewer.py
src/tooluniverse/tools/MedicalTermNormalizer.py
src/tooluniverse/tools/MedlinePlus_connect_lookup_by_code.py
src/tooluniverse/tools/MedlinePlus_get_genetics_condition_by_name.py
src/tooluniverse/tools/MedlinePlus_get_genetics_gene_by_name.py
src/tooluniverse/tools/MedlinePlus_get_genetics_index.py
src/tooluniverse/tools/MedlinePlus_search_topics_by_keyword.py
src/tooluniverse/tools/MetNorway_get_forecast.py
src/tooluniverse/tools/MetaCyc_get_compound.py
src/tooluniverse/tools/MetaCyc_get_pathway.py
src/tooluniverse/tools/MetaCyc_get_reaction.py
src/tooluniverse/tools/MetaCyc_search_pathways.py
src/tooluniverse/tools/MetaboAnalyst_biomarker_enrichment.py
src/tooluniverse/tools/MetaboAnalyst_get_pathway_library.py
src/tooluniverse/tools/MetaboAnalyst_name_to_id.py
src/tooluniverse/tools/MetaboAnalyst_pathway_enrichment.py
src/tooluniverse/tools/MetabolomicsWorkbench_get_compound_by_pubchem_cid.py
src/tooluniverse/tools/MetabolomicsWorkbench_get_refmet_info.py
src/tooluniverse/tools/MetabolomicsWorkbench_get_study.py
src/tooluniverse/tools/MetabolomicsWorkbench_search_by_exact_mass.py
src/tooluniverse/tools/MetabolomicsWorkbench_search_by_mz.py
src/tooluniverse/tools/MetabolomicsWorkbench_search_compound_by_name.py
src/tooluniverse/tools/MethodologyRigorReviewer.py
src/tooluniverse/tools/MobiDB_get_consensus.py
src/tooluniverse/tools/MobiDB_get_protein.py
src/tooluniverse/tools/ModelDB_get_celltype.py
src/tooluniverse/tools/ModelDB_get_model.py
src/tooluniverse/tools/ModelDB_get_paper.py
src/tooluniverse/tools/ModelDB_list_celltypes.py
src/tooluniverse/tools/ModelDB_list_models.py
src/tooluniverse/tools/MonarchV3_get_associations.py
src/tooluniverse/tools/MonarchV3_get_entity.py
src/tooluniverse/tools/MonarchV3_search.py
src/tooluniverse/tools/Monarch_get_gene_diseases.py
src/tooluniverse/tools/Monarch_get_gene_phenotypes.py
src/tooluniverse/tools/Monarch_search_gene.py
src/tooluniverse/tools/MouseMine_search.py
src/tooluniverse/tools/MouseMine_search_alleles.py
src/tooluniverse/tools/MouseMine_search_genes.py
src/tooluniverse/tools/MultiAgentLiteratureSearch.py
src/tooluniverse/tools/MyChem_get_chemical_annotation.py
src/tooluniverse/tools/MyChem_query_chemicals.py
src/tooluniverse/tools/MyDisease_get_disease.py
src/tooluniverse/tools/MyDisease_search_diseases.py
src/tooluniverse/tools/MyGene_batch_query.py
src/tooluniverse/tools/MyGene_get_gene_annotation.py
src/tooluniverse/tools/MyGene_query_genes.py
src/tooluniverse/tools/MyVariant_get_variant_annotation.py
src/tooluniverse/tools/MyVariant_query_variants.py
src/tooluniverse/tools/NASACMR_search_collections.py
src/tooluniverse/tools/NASACMR_search_granules.py
src/tooluniverse/tools/NASAEONET_get_categories.py
src/tooluniverse/tools/NASAEONET_get_events.py
src/tooluniverse/tools/NASAExoplanet_query_planets.py
src/tooluniverse/tools/NASAExoplanet_query_stars.py
src/tooluniverse/tools/NASANED_lookup_object.py
src/tooluniverse/tools/NASASBDB_close_approaches.py
src/tooluniverse/tools/NASASBDB_get_body.py
src/tooluniverse/tools/NASA_DONKI_get_coronal_mass_ejections.py
src/tooluniverse/tools/NASA_DONKI_get_geomagnetic_storms.py
src/tooluniverse/tools/NASA_DONKI_get_high_speed_streams.py
src/tooluniverse/tools/NASA_DONKI_get_interplanetary_shocks.py
src/tooluniverse/tools/NASA_DONKI_get_solar_energetic_particles.py
src/tooluniverse/tools/NASA_DONKI_get_solar_flares.py
src/tooluniverse/tools/NCBIDatasets_get_gene.py
src/tooluniverse/tools/NCBIDatasets_get_gene_by_symbol.py
src/tooluniverse/tools/NCBIDatasets_get_orthologs.py
src/tooluniverse/tools/NCBIDatasets_get_taxonomy.py
src/tooluniverse/tools/NCBIDatasets_suggest_taxonomy.py
src/tooluniverse/tools/NCBIGene_get_summary.py
src/tooluniverse/tools/NCBIGene_search.py
src/tooluniverse/tools/NCBIProtein_get_summary.py
src/tooluniverse/tools/NCBI_SRA_get_download_urls.py
src/tooluniverse/tools/NCBI_SRA_get_run_info.py
src/tooluniverse/tools/NCBI_SRA_link_to_biosample.py
src/tooluniverse/tools/NCBI_SRA_search_runs.py
src/tooluniverse/tools/NCBI_fetch_accessions.py
src/tooluniverse/tools/NCBI_get_sequence.py
src/tooluniverse/tools/NCBI_search_nucleotide.py
src/tooluniverse/tools/NCCN_get_patient_guideline.py
src/tooluniverse/tools/NCCN_list_patient_guidelines.py
src/tooluniverse/tools/NCCN_search_guidelines.py
src/tooluniverse/tools/NCIDrugDict_get_drug.py
src/tooluniverse/tools/NCIDrugDict_search.py
src/tooluniverse/tools/NCIThesaurus_get_children.py
src/tooluniverse/tools/NCIThesaurus_get_concept.py
src/tooluniverse/tools/NCIThesaurus_search.py
src/tooluniverse/tools/NCI_expand_drugs_by_letter.py
src/tooluniverse/tools/NCI_get_drug_by_name.py
src/tooluniverse/tools/NCI_search_cancer_resources.py
src/tooluniverse/tools/NDEx_get_network.py
src/tooluniverse/tools/NDEx_get_network_summary.py
src/tooluniverse/tools/NDEx_search_networks.py
src/tooluniverse/tools/NEB_Tm_calculate.py
src/tooluniverse/tools/NEB_Tm_list_polymerases.py
src/tooluniverse/tools/NICE_Clinical_Guidelines_Search.py
src/tooluniverse/tools/NICE_Guideline_Full_Text.py
src/tooluniverse/tools/NWS_get_active_alerts.py
src/tooluniverse/tools/NWS_get_forecast.py
src/tooluniverse/tools/NWS_get_point_metadata.py
src/tooluniverse/tools/NeuroMorpho_get_field_values.py
src/tooluniverse/tools/NeuroMorpho_get_morphometry.py
src/tooluniverse/tools/NeuroMorpho_get_neuron.py
src/tooluniverse/tools/NeuroMorpho_search_neurons.py
src/tooluniverse/tools/NeuroVault_get_collection.py
src/tooluniverse/tools/NeuroVault_get_image.py
src/tooluniverse/tools/NeuroVault_list_collection_images.py
src/tooluniverse/tools/NeuroVault_list_collections.py
src/tooluniverse/tools/Nextstrain_get_dataset.py
src/tooluniverse/tools/Nextstrain_list_datasets.py
src/tooluniverse/tools/Nominatim_geocode.py
src/tooluniverse/tools/Nominatim_reverse_geocode.py
src/tooluniverse/tools/NoveltySignificanceReviewer.py
src/tooluniverse/tools/NvidiaNIM_alphafold2.py
src/tooluniverse/tools/NvidiaNIM_alphafold2_multimer.py
src/tooluniverse/tools/NvidiaNIM_boltz2.py
src/tooluniverse/tools/NvidiaNIM_diffdock.py
src/tooluniverse/tools/NvidiaNIM_esm2_650m.py
src/tooluniverse/tools/NvidiaNIM_esmfold.py
src/tooluniverse/tools/NvidiaNIM_evo2.py
src/tooluniverse/tools/NvidiaNIM_genmol.py
src/tooluniverse/tools/NvidiaNIM_maisi.py
src/tooluniverse/tools/NvidiaNIM_molmim.py
src/tooluniverse/tools/NvidiaNIM_msa_search.py
src/tooluniverse/tools/NvidiaNIM_openfold2.py
src/tooluniverse/tools/NvidiaNIM_openfold3.py
src/tooluniverse/tools/NvidiaNIM_proteinmpnn.py
src/tooluniverse/tools/NvidiaNIM_rfdiffusion.py
src/tooluniverse/tools/NvidiaNIM_vista3d.py
src/tooluniverse/tools/OBIS_search_occurrences.py
src/tooluniverse/tools/OBIS_search_taxa.py
src/tooluniverse/tools/OMA_get_group.py
src/tooluniverse/tools/OMA_get_hog.py
src/tooluniverse/tools/OMA_get_orthologs.py
src/tooluniverse/tools/OMA_get_protein.py
src/tooluniverse/tools/OMIM_get_clinical_synopsis.py
src/tooluniverse/tools/OMIM_get_entry.py
src/tooluniverse/tools/OMIM_get_gene_map.py
src/tooluniverse/tools/OMIM_search.py
src/tooluniverse/tools/ORCID_get_employments.py
src/tooluniverse/tools/ORCID_get_profile.py
src/tooluniverse/tools/ORCID_get_works.py
src/tooluniverse/tools/ORCID_search_researchers.py
src/tooluniverse/tools/OSF_search_preprints.py
src/tooluniverse/tools/OSL_get_efo_id_by_disease_name.py
src/tooluniverse/tools/OmicsDI_get_dataset.py
src/tooluniverse/tools/OmicsDI_get_statistics.py
src/tooluniverse/tools/OmicsDI_search_datasets.py
src/tooluniverse/tools/OmniPath_get_cell_communication_annotations.py
src/tooluniverse/tools/OmniPath_get_complexes.py
src/tooluniverse/tools/OmniPath_get_dorothea_regulon.py
src/tooluniverse/tools/OmniPath_get_enzyme_substrate.py
src/tooluniverse/tools/OmniPath_get_intercell_roles.py
src/tooluniverse/tools/OmniPath_get_ligand_receptor_interactions.py
src/tooluniverse/tools/OmniPath_get_signaling_interactions.py
src/tooluniverse/tools/OmniPath_get_tf_target_interactions.py
src/tooluniverse/tools/OncoKB_annotate_copy_number.py
src/tooluniverse/tools/OncoKB_annotate_variant.py
src/tooluniverse/tools/OncoKB_get_cancer_genes.py
src/tooluniverse/tools/OncoKB_get_gene_info.py
src/tooluniverse/tools/OncoKB_get_levels.py
src/tooluniverse/tools/OpenAIRE_search_publications.py
src/tooluniverse/tools/OpenAlex_Guidelines_Search.py
src/tooluniverse/tools/OpenCitations_get_citation_count.py
src/tooluniverse/tools/OpenCitations_get_citations.py
src/tooluniverse/tools/OpenCitations_get_references.py
src/tooluniverse/tools/OpenFDA_search_device_510k.py
src/tooluniverse/tools/OpenFDA_search_device_enforcement.py
src/tooluniverse/tools/OpenFDA_search_drug_enforcement.py
src/tooluniverse/tools/OpenFDA_search_drug_events.py
src/tooluniverse/tools/OpenFDA_search_drug_labels.py
src/tooluniverse/tools/OpenFDA_search_drug_ndc.py
src/tooluniverse/tools/OpenFDA_search_food_enforcement.py
src/tooluniverse/tools/OpenFoodFacts_get_product.py
src/tooluniverse/tools/OpenFoodFacts_search_products.py
src/tooluniverse/tools/OpenML_get_dataset.py
src/tooluniverse/tools/OpenML_search_datasets.py
src/tooluniverse/tools/OpenMeteo_geocode_location.py
src/tooluniverse/tools/OpenMeteo_get_air_quality.py
src/tooluniverse/tools/OpenMeteo_get_flood_forecast.py
src/tooluniverse/tools/OpenMeteo_get_historical_climate.py
src/tooluniverse/tools/OpenMeteo_get_historical_weather.py
src/tooluniverse/tools/OpenMeteo_get_marine_forecast.py
src/tooluniverse/tools/OpenMeteo_get_weather_forecast.py
src/tooluniverse/tools/OpenNeuro_get_dataset.py
src/tooluniverse/tools/OpenNeuro_get_dataset_snapshots.py
src/tooluniverse/tools/OpenNeuro_list_datasets.py
src/tooluniverse/tools/OpenNeuro_search_by_modality.py
src/tooluniverse/tools/OpenTargets_drug_pharmacogenomics_data.py
src/tooluniverse/tools/OpenTargets_get_approved_indications_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_associated_diseases_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_associated_drugs_by_disease_efoId.py
src/tooluniverse/tools/OpenTargets_get_associated_drugs_by_target_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_associated_phenotypes_by_disease_efoId.py
src/tooluniverse/tools/OpenTargets_get_associated_targets_by_disease_efoId.py
src/tooluniverse/tools/OpenTargets_get_associated_targets_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_biological_mouse_models_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_chemical_probes_by_target_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_credible_set_detail.py
src/tooluniverse/tools/OpenTargets_get_disease_ancestors_parents_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_descendants_children_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_description_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_id_description_by_name.py
src/tooluniverse/tools/OpenTargets_get_disease_ids_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_ids_by_name.py
src/tooluniverse/tools/OpenTargets_get_disease_locations_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_synonyms_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_disease_therapeutic_areas_by_efoId.py
src/tooluniverse/tools/OpenTargets_get_diseases_phenotypes_by_target_ensembl.py
src/tooluniverse/tools/OpenTargets_get_drug_adverse_events_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_approval_status_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_blackbox_status_by_chembl_ID.py
src/tooluniverse/tools/OpenTargets_get_drug_chembId_by_generic_name.py
src/tooluniverse/tools/OpenTargets_get_drug_description_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_id_description_by_name.py
src/tooluniverse/tools/OpenTargets_get_drug_indications_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_mechanisms_of_action_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_names_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_synonyms_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_trade_names_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_drug_warnings_by_chemblId.py
src/tooluniverse/tools/OpenTargets_get_evidence_by_datasource.py
src/tooluniverse/tools/OpenTargets_get_gene_ontology_terms_by_goID.py
src/tooluniverse/tools/OpenTargets_get_gwas_study.py
src/tooluniverse/tools/OpenTargets_get_known_drugs_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_parent_child_molecules_by_chembl_ID.py
src/tooluniverse/tools/OpenTargets_get_publications_by_disease_efoId.py
src/tooluniverse/tools/OpenTargets_get_publications_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_publications_by_target_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_similar_entities_by_disease_efoId.py
src/tooluniverse/tools/OpenTargets_get_similar_entities_by_drug_chemblId.py
src/tooluniverse/tools/OpenTargets_get_similar_entities_by_target_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_study_credible_sets.py
src/tooluniverse/tools/OpenTargets_get_target_classes_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_constraint_info_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_enabling_packages_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_gene_ontology_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_genomic_location_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_homologues_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_id_description_by_name.py
src/tooluniverse/tools/OpenTargets_get_target_interactions_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_safety_profile_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_subcell_locations_by_ensembl_ID.py
src/tooluniverse/tools/OpenTargets_get_target_synonyms_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_target_tractability_by_ensemblID.py
src/tooluniverse/tools/OpenTargets_get_variant_credible_sets.py
src/tooluniverse/tools/OpenTargets_get_variant_info.py
src/tooluniverse/tools/OpenTargets_map_any_disease_id_to_all_other_ids.py
src/tooluniverse/tools/OpenTargets_multi_entity_search_by_query_string.py
src/tooluniverse/tools/OpenTargets_search_category_counts_by_query_string.py
src/tooluniverse/tools/OpenTargets_search_gwas_studies_by_disease.py
src/tooluniverse/tools/OpenTargets_target_disease_evidence.py
src/tooluniverse/tools/OpenTopoData_get_elevation.py
src/tooluniverse/tools/OpenTree_get_induced_subtree.py
src/tooluniverse/tools/OpenTree_get_mrca.py
src/tooluniverse/tools/OpenTree_get_taxon.py
src/tooluniverse/tools/OpenTree_match_names.py
src/tooluniverse/tools/Orphanet_get_classification.py
src/tooluniverse/tools/Orphanet_get_disease.py
src/tooluniverse/tools/Orphanet_get_genes.py
src/tooluniverse/tools/Orphanet_search_by_name.py
src/tooluniverse/tools/Orphanet_search_diseases.py
src/tooluniverse/tools/OrthoDB_get_group_details.py
src/tooluniverse/tools/OrthoDB_get_orthologs.py
src/tooluniverse/tools/OrthoDB_search_groups.py
src/tooluniverse/tools/OutputSummarizationComposer.py
src/tooluniverse/tools/OverallSummaryAgent.py
src/tooluniverse/tools/OxO_get_ontology_mappings.py
src/tooluniverse/tools/OxO_search_ontology_mappings.py
src/tooluniverse/tools/PANTHER_enrichment.py
src/tooluniverse/tools/PANTHER_gene_info.py
src/tooluniverse/tools/PANTHER_ortholog.py
src/tooluniverse/tools/PDB_REDO_get_structure_quality.py
src/tooluniverse/tools/PDB_search_similar_structures.py
src/tooluniverse/tools/PDBeSIFTS_get_all_structures.py
src/tooluniverse/tools/PDBeSIFTS_get_best_structures.py
src/tooluniverse/tools/PDBeSIFTS_get_pdb_to_uniprot.py
src/tooluniverse/tools/PDBeSearch_get_compound.py
src/tooluniverse/tools/PDBeSearch_search_by_organism.py
src/tooluniverse/tools/PDBeSearch_search_structures.py
src/tooluniverse/tools/PDBeValidation_get_outlier_residues.py
src/tooluniverse/tools/PDBeValidation_get_quality_scores.py
src/tooluniverse/tools/PDBe_KB_get_interface_residues.py
src/tooluniverse/tools/PDBe_KB_get_ligand_sites.py
src/tooluniverse/tools/PDBe_KB_get_summary_stats.py
src/tooluniverse/tools/PDBe_KB_get_superposition_clusters.py
src/tooluniverse/tools/PDBe_get_bound_molecules.py
src/tooluniverse/tools/PDBe_get_compound_details.py
src/tooluniverse/tools/PDBe_get_compound_structures.py
src/tooluniverse/tools/PDBe_get_compound_summary.py
src/tooluniverse/tools/PDBe_get_funpdbe_annotations.py
src/tooluniverse/tools/PDBe_get_residue_listing.py
src/tooluniverse/tools/PDBe_get_structure_ligands.py
src/tooluniverse/tools/PDBe_get_uniprot_mappings.py
src/tooluniverse/tools/PDBe_get_uniprot_structure_coverage.py
src/tooluniverse/tools/PDC_get_clinical_data.py
src/tooluniverse/tools/PDC_get_gene_protein.py
src/tooluniverse/tools/PDC_get_study_summary.py
src/tooluniverse/tools/PDC_list_programs.py
src/tooluniverse/tools/PDC_search_studies.py
src/tooluniverse/tools/PMC_search_papers.py
src/tooluniverse/tools/POWO_get_taxon.py
src/tooluniverse/tools/POWO_search_plants.py
src/tooluniverse/tools/PRIDE_get_project.py
src/tooluniverse/tools/PRIDE_get_project_files.py
src/tooluniverse/tools/PRIDE_search_proteomics.py
src/tooluniverse/tools/PackageAnalyzer.py
src/tooluniverse/tools/Paleobiology_get_fossils.py
src/tooluniverse/tools/PanelApp_get_panel.py
src/tooluniverse/tools/PanelApp_search_genes.py
src/tooluniverse/tools/PanelApp_search_panels.py
src/tooluniverse/tools/Pfam_get_family_detail.py
src/tooluniverse/tools/Pfam_get_family_proteins.py
src/tooluniverse/tools/Pfam_get_family_proteomes.py
src/tooluniverse/tools/Pfam_get_protein_annotations.py
src/tooluniverse/tools/Pfam_search_clans.py
src/tooluniverse/tools/Pfam_search_families.py
src/tooluniverse/tools/PharmGKB_get_clinical_annotations.py
src/tooluniverse/tools/PharmGKB_get_dosing_guidelines.py
src/tooluniverse/tools/PharmGKB_get_drug_details.py
src/tooluniverse/tools/PharmGKB_get_gene_details.py
src/tooluniverse/tools/PharmGKB_search_drugs.py
src/tooluniverse/tools/PharmGKB_search_genes.py
src/tooluniverse/tools/PharmGKB_search_variants.py
src/tooluniverse/tools/PharmVar_get_alleles.py
src/tooluniverse/tools/PharmVar_list_genes.py
src/tooluniverse/tools/PharmacoDB_get_biomarker_assoc.py
src/tooluniverse/tools/PharmacoDB_get_cell_line.py
src/tooluniverse/tools/PharmacoDB_get_compound.py
src/tooluniverse/tools/PharmacoDB_get_experiments.py
src/tooluniverse/tools/PharmacoDB_list_datasets.py
src/tooluniverse/tools/PharmacoDB_search.py
src/tooluniverse/tools/Pharos_get_disease_targets.py
src/tooluniverse/tools/Pharos_get_target.py
src/tooluniverse/tools/Pharos_get_tdl_summary.py
src/tooluniverse/tools/Pharos_search_targets.py
src/tooluniverse/tools/PlantReactome_get_pathway.py
src/tooluniverse/tools/PlantReactome_list_species.py
src/tooluniverse/tools/PlantReactome_search_pathways.py
src/tooluniverse/tools/PomBase_get_gene.py
src/tooluniverse/tools/PomBase_get_gene_phenotypes.py
src/tooluniverse/tools/PomBase_search_genes.py
src/tooluniverse/tools/ProtacDB_get_protac.py
src/tooluniverse/tools/ProtacDB_search_protacs.py
src/tooluniverse/tools/ProtacDB_search_targets.py
src/tooluniverse/tools/ProteinsPlus_analyze_binding_site_similarity.py
src/tooluniverse/tools/ProteinsPlus_generate_interaction_diagram.py
src/tooluniverse/tools/ProteinsPlus_predict_binding_sites.py
src/tooluniverse/tools/ProteinsPlus_predict_binding_sites_v3.py
src/tooluniverse/tools/ProteinsPlus_profile_structure_quality.py
src/tooluniverse/tools/ProteomeXchange_get_dataset.py
src/tooluniverse/tools/ProteomeXchange_search_datasets.py
src/tooluniverse/tools/ProteomicsDB_get_expression_summary.py
src/tooluniverse/tools/ProteomicsDB_get_protein_expression.py
src/tooluniverse/tools/ProteomicsDB_list_tissues.py
src/tooluniverse/tools/ProteomicsDB_search_proteins.py
src/tooluniverse/tools/ProtocolOptimizer.py
src/tooluniverse/tools/PubChemBioAssay_get_assay.py
src/tooluniverse/tools/PubChemBioAssay_get_assay_summary.py
src/tooluniverse/tools/PubChemBioAssay_search_by_gene.py
src/tooluniverse/tools/PubChemTox_get_acute_effects.py
src/tooluniverse/tools/PubChemTox_get_carcinogen_classification.py
src/tooluniverse/tools/PubChemTox_get_ghs_classification.py
src/tooluniverse/tools/PubChemTox_get_target_organs.py
src/tooluniverse/tools/PubChemTox_get_toxicity_summary.py
src/tooluniverse/tools/PubChemTox_get_toxicity_values.py
src/tooluniverse/tools/PubChem_get_CID_by_SMILES.py
src/tooluniverse/tools/PubChem_get_CID_by_compound_name.py
src/tooluniverse/tools/PubChem_get_assay_active_compounds.py
src/tooluniverse/tools/PubChem_get_assay_description.py
src/tooluniverse/tools/PubChem_get_assay_dose_response.py
src/tooluniverse/tools/PubChem_get_assay_summary.py
src/tooluniverse/tools/PubChem_get_assay_targets.py
src/tooluniverse/tools/PubChem_get_assays_for_compound_active.py
src/tooluniverse/tools/PubChem_get_associated_patents_by_CID.py
src/tooluniverse/tools/PubChem_get_compound_2D_image_by_CID.py
src/tooluniverse/tools/PubChem_get_compound_bioactivity.py
src/tooluniverse/tools/PubChem_get_compound_properties_by_CID.py
src/tooluniverse/tools/PubChem_get_compound_synonyms_by_CID.py
src/tooluniverse/tools/PubChem_get_compound_xrefs_by_CID.py
src/tooluniverse/tools/PubChem_search_assays_by_target_gene.py
src/tooluniverse/tools/PubChem_search_assays_by_type.py
src/tooluniverse/tools/PubChem_search_compounds_by_similarity.py
src/tooluniverse/tools/PubChem_search_compounds_by_substructure.py
src/tooluniverse/tools/PubMed_Guidelines_Search.py
src/tooluniverse/tools/PubMed_get_article.py
src/tooluniverse/tools/PubMed_get_cited_by.py
src/tooluniverse/tools/PubMed_get_links.py
src/tooluniverse/tools/PubMed_get_related.py
src/tooluniverse/tools/PubMed_search_articles.py
src/tooluniverse/tools/PubTator3_EntityAutocomplete.py
src/tooluniverse/tools/PubTator3_LiteratureSearch.py
src/tooluniverse/tools/PubTator3_get_annotations.py
src/tooluniverse/tools/PyPIPackageInspector.py
src/tooluniverse/tools/QualityCheckerAgent.py
src/tooluniverse/tools/QuestionRephraser.py
src/tooluniverse/tools/QuickGO_annotations_by_gene.py
src/tooluniverse/tools/QuickGO_annotations_by_goterm.py
src/tooluniverse/tools/QuickGO_get_term_children.py
src/tooluniverse/tools/QuickGO_get_term_detail.py
src/tooluniverse/tools/RCSBAdvSearch_search_by_motif.py
src/tooluniverse/tools/RCSBAdvSearch_search_structures.py
src/tooluniverse/tools/RCSBData_get_assembly.py
src/tooluniverse/tools/RCSBData_get_entry.py
src/tooluniverse/tools/RCSBData_get_nonpolymer_entity.py
src/tooluniverse/tools/RCSBGraphQL_get_ligand_info.py
src/tooluniverse/tools/RCSBGraphQL_get_polymer_entity.py
src/tooluniverse/tools/RCSBGraphQL_get_structure_summary.py
src/tooluniverse/tools/RCSB_get_chemical_component.py
src/tooluniverse/tools/RNAcentral_get_by_accession.py
src/tooluniverse/tools/RNAcentral_search.py
src/tooluniverse/tools/ROR_get_organization.py
src/tooluniverse/tools/ROR_search_organizations.py
src/tooluniverse/tools/ReMap_get_transcription_factor_binding.py
src/tooluniverse/tools/ReactomeAnalysis_pathway_enrichment.py
src/tooluniverse/tools/ReactomeAnalysis_species_comparison.py
src/tooluniverse/tools/ReactomeAnalysis_token_result.py
src/tooluniverse/tools/ReactomeContent_get_contained_events.py
src/tooluniverse/tools/ReactomeContent_get_enhanced_pathway.py
src/tooluniverse/tools/ReactomeContent_search.py
src/tooluniverse/tools/ReactomeInteractors_get_entity_pathways.py
src/tooluniverse/tools/ReactomeInteractors_get_protein_interactors.py
src/tooluniverse/tools/ReactomeInteractors_search_entity.py
src/tooluniverse/tools/Reactome_get_complex.py
src/tooluniverse/tools/Reactome_get_database_version.py
src/tooluniverse/tools/Reactome_get_diseases.py
src/tooluniverse/tools/Reactome_get_entity_compartment.py
src/tooluniverse/tools/Reactome_get_entity_events.py
src/tooluniverse/tools/Reactome_get_event_ancestors.py
src/tooluniverse/tools/Reactome_get_events_hierarchy.py
src/tooluniverse/tools/Reactome_get_interactor.py
src/tooluniverse/tools/Reactome_get_participant_reference_entities.py
src/tooluniverse/tools/Reactome_get_participants.py
src/tooluniverse/tools/Reactome_get_pathway.py
src/tooluniverse/tools/Reactome_get_pathway_hierarchy.py
src/tooluniverse/tools/Reactome_get_pathway_reactions.py
src/tooluniverse/tools/Reactome_get_pathways_low_entity.py
src/tooluniverse/tools/Reactome_get_reaction.py
src/tooluniverse/tools/Reactome_list_species.py
src/tooluniverse/tools/Reactome_list_top_pathways.py
src/tooluniverse/tools/Reactome_map_uniprot_to_pathways.py
src/tooluniverse/tools/Reactome_map_uniprot_to_reactions.py
src/tooluniverse/tools/Reactome_query_by_ids.py
src/tooluniverse/tools/ReferenceInfoAnalyzer.py
src/tooluniverse/tools/RegulomeDB_query_variant.py
src/tooluniverse/tools/ReproducibilityTransparencyReviewer.py
src/tooluniverse/tools/ResultSummarizerAgent.py
src/tooluniverse/tools/ResultsInterpretationReviewer.py
src/tooluniverse/tools/Rfam_accession_to_id.py
src/tooluniverse/tools/Rfam_get_alignment.py
src/tooluniverse/tools/Rfam_get_covariance_model.py
src/tooluniverse/tools/Rfam_get_family.py
src/tooluniverse/tools/Rfam_get_sequence_regions.py
src/tooluniverse/tools/Rfam_get_structure_mapping.py
src/tooluniverse/tools/Rfam_get_tree_data.py
src/tooluniverse/tools/Rfam_id_to_accession.py
src/tooluniverse/tools/Rfam_search_sequence.py
src/tooluniverse/tools/Rhea_search_by_chebi.py
src/tooluniverse/tools/Rhea_search_by_ec.py
src/tooluniverse/tools/Rhea_search_reactions.py
src/tooluniverse/tools/RxNorm_get_drug_names.py
src/tooluniverse/tools/SASBDB_get_entries_by_tag.py
src/tooluniverse/tools/SASBDB_get_entries_by_uniprot.py
src/tooluniverse/tools/SASBDB_get_entry.py
src/tooluniverse/tools/SASBDB_list_instruments.py
src/tooluniverse/tools/SASBDB_search_entries.py
src/tooluniverse/tools/SAbDab_get_structure.py
src/tooluniverse/tools/SAbDab_get_summary.py
src/tooluniverse/tools/SAbDab_search_structures.py
src/tooluniverse/tools/SCREEN_get_regulatory_elements.py
src/tooluniverse/tools/SDSS_sql_search.py
src/tooluniverse/tools/SGD_get_gene.py
src/tooluniverse/tools/SGD_get_go_annotations.py
src/tooluniverse/tools/SGD_get_interactions.py
src/tooluniverse/tools/SGD_get_phenotypes.py
src/tooluniverse/tools/SGD_search.py
src/tooluniverse/tools/SIGN_list_guidelines.py
src/tooluniverse/tools/SIGN_search_guidelines.py
src/tooluniverse/tools/SIMBAD_advanced_query.py
src/tooluniverse/tools/SIMBAD_query_object.py
src/tooluniverse/tools/STITCH_get_chemical_protein_interactions.py
src/tooluniverse/tools/STITCH_get_interaction_partners.py
src/tooluniverse/tools/STITCH_resolve_identifier.py
src/tooluniverse/tools/STRING_functional_enrichment.py
src/tooluniverse/tools/STRING_get_enrichment.py
src/tooluniverse/tools/STRING_get_functional_annotations.py
src/tooluniverse/tools/STRING_get_interaction_partners.py
src/tooluniverse/tools/STRING_get_network.py
src/tooluniverse/tools/STRING_get_protein_interactions.py
src/tooluniverse/tools/STRING_map_identifiers.py
src/tooluniverse/tools/STRING_ppi_enrichment.py
src/tooluniverse/tools/SYNERGxDB_get_combo_matrix.py
src/tooluniverse/tools/SYNERGxDB_get_combo_stats.py
src/tooluniverse/tools/SYNERGxDB_get_drug.py
src/tooluniverse/tools/SYNERGxDB_list_cell_lines.py
src/tooluniverse/tools/SYNERGxDB_list_datasets.py
src/tooluniverse/tools/SYNERGxDB_list_drugs.py
src/tooluniverse/tools/SYNERGxDB_search_combos.py
src/tooluniverse/tools/ScanProsite_scan_protein.py
src/tooluniverse/tools/ScientificTextSummarizer.py
src/tooluniverse/tools/SemanticScholar_get_author.py
src/tooluniverse/tools/SemanticScholar_get_paper.py
src/tooluniverse/tools/SemanticScholar_get_pdf_snippets.py
src/tooluniverse/tools/SemanticScholar_get_recommendations.py
src/tooluniverse/tools/SemanticScholar_search_authors.py
src/tooluniverse/tools/SemanticScholar_search_papers.py
src/tooluniverse/tools/SoilGrids_get_properties.py
src/tooluniverse/tools/SpliceAI_get_max_delta.py
src/tooluniverse/tools/SpliceAI_predict_pangolin.py
src/tooluniverse/tools/SpliceAI_predict_splice.py
src/tooluniverse/tools/SunriseSunset_get_times.py
src/tooluniverse/tools/Survival_cox_regression.py
src/tooluniverse/tools/Survival_kaplan_meier.py
src/tooluniverse/tools/Survival_log_rank_test.py
src/tooluniverse/tools/SwissADME_calculate_adme.py
src/tooluniverse/tools/SwissADME_check_druglikeness.py
src/tooluniverse/tools/SwissDock_check_job_status.py
src/tooluniverse/tools/SwissDock_dock_ligand.py
src/tooluniverse/tools/SwissDock_retrieve_results.py
src/tooluniverse/tools/SwissModel_get_models.py
src/tooluniverse/tools/SwissModel_get_summary.py
src/tooluniverse/tools/SwissTargetPrediction_organisms.py
src/tooluniverse/tools/SwissTargetPrediction_predict.py
src/tooluniverse/tools/SynBioHub_get_collections.py
src/tooluniverse/tools/SynBioHub_get_part.py
src/tooluniverse/tools/SynBioHub_search_parts.py
src/tooluniverse/tools/TCIA_get_body_part_values.py
src/tooluniverse/tools/TCIA_get_modality_values.py
src/tooluniverse/tools/TCIA_get_patient_studies.py
src/tooluniverse/tools/TCIA_get_series.py
src/tooluniverse/tools/TCIA_get_series_metadata.py
src/tooluniverse/tools/TCIA_get_series_size.py
src/tooluniverse/tools/TCIA_list_collections.py
src/tooluniverse/tools/TIMER2_gene_correlation.py
src/tooluniverse/tools/TIMER2_immune_estimation.py
src/tooluniverse/tools/TIMER2_survival_association.py
src/tooluniverse/tools/TRIP_Database_Guidelines_Search.py
src/tooluniverse/tools/TargetMine_search.py
src/tooluniverse/tools/TargetMine_search_genes.py
src/tooluniverse/tools/TestCaseGenerator.py
src/tooluniverse/tools/TestResultsAnalyzer.py
src/tooluniverse/tools/TheraSAbDab_get_all_therapeutics.py
src/tooluniverse/tools/TheraSAbDab_search_by_target.py
src/tooluniverse/tools/TheraSAbDab_search_therapeutics.py
src/tooluniverse/tools/ThreeDBeacons_get_structure_summary.py
src/tooluniverse/tools/ThreeDBeacons_get_structures.py
src/tooluniverse/tools/ToolCompatibilityAnalyzer.py
src/tooluniverse/tools/ToolDescriptionOptimizer.py
src/tooluniverse/tools/ToolDiscover.py
src/tooluniverse/tools/ToolGraphComposer.py
src/tooluniverse/tools/ToolGraphGenerationPipeline.py
src/tooluniverse/tools/ToolMetadataGenerationPipeline.py
src/tooluniverse/tools/ToolMetadataGenerator.py
src/tooluniverse/tools/ToolMetadataStandardizer.py
src/tooluniverse/tools/ToolOutputSummarizer.py
src/tooluniverse/tools/ToolQualityEvaluator.py
src/tooluniverse/tools/ToolRelationshipDetector.py
src/tooluniverse/tools/Tool_Finder.py
src/tooluniverse/tools/Tool_Finder_Keyword.py
src/tooluniverse/tools/Tool_Finder_LLM.py
src/tooluniverse/tools/Tool_RAG.py
src/tooluniverse/tools/UCSC_get_cpg_islands.py
src/tooluniverse/tools/UCSC_get_encode_cCREs.py
src/tooluniverse/tools/UCSC_get_sequence.py
src/tooluniverse/tools/UCSC_get_tf_binding_clusters.py
src/tooluniverse/tools/UCSC_get_track.py
src/tooluniverse/tools/UCSC_search.py
src/tooluniverse/tools/USCensus_get_population.py
src/tooluniverse/tools/USGSWater_get_streamflow.py
src/tooluniverse/tools/USGSWater_get_water_level.py
src/tooluniverse/tools/USGSWater_get_water_temperature.py
src/tooluniverse/tools/USGS_get_earthquake_feed.py
src/tooluniverse/tools/USGS_query_earthquakes.py
src/tooluniverse/tools/UniChem_list_sources.py
src/tooluniverse/tools/UniChem_search_compound.py
src/tooluniverse/tools/UniParc_get_entry.py
src/tooluniverse/tools/UniParc_search.py
src/tooluniverse/tools/UniProtIDMap_convert_ids.py
src/tooluniverse/tools/UniProtIDMap_gene_to_uniprot.py
src/tooluniverse/tools/UniProtIDMap_list_databases.py
src/tooluniverse/tools/UniProtIDMap_to_pdb.py
src/tooluniverse/tools/UniProtLocations_get_location.py
src/tooluniverse/tools/UniProtLocations_search.py
src/tooluniverse/tools/UniProtRef_get_disease.py
src/tooluniverse/tools/UniProtRef_get_keyword.py
src/tooluniverse/tools/UniProtRef_get_proteome.py
src/tooluniverse/tools/UniProtRef_search_diseases.py
src/tooluniverse/tools/UniProtRef_search_keywords.py
src/tooluniverse/tools/UniProtRef_search_proteomes.py
src/tooluniverse/tools/UniProtTaxonomy_get_taxon.py
src/tooluniverse/tools/UniProtTaxonomy_search.py
src/tooluniverse/tools/UniProt_get_alternative_names_by_accession.py
src/tooluniverse/tools/UniProt_get_disease_variants_by_accession.py
src/tooluniverse/tools/UniProt_get_entry_by_accession.py
src/tooluniverse/tools/UniProt_get_function_by_accession.py
src/tooluniverse/tools/UniProt_get_isoform_ids_by_accession.py
src/tooluniverse/tools/UniProt_get_organism_by_accession.py
src/tooluniverse/tools/UniProt_get_proteome.py
src/tooluniverse/tools/UniProt_get_ptm_processing_by_accession.py
src/tooluniverse/tools/UniProt_get_recommended_name_by_accession.py
src/tooluniverse/tools/UniProt_get_sequence_by_accession.py
src/tooluniverse/tools/UniProt_get_subcellular_location_by_accession.py
src/tooluniverse/tools/UniProt_get_uniparc_entry.py
src/tooluniverse/tools/UniProt_get_uniref_cluster.py
src/tooluniverse/tools/UniProt_id_mapping.py
src/tooluniverse/tools/UniProt_search.py
src/tooluniverse/tools/UniProt_search_proteomes.py
src/tooluniverse/tools/UniProt_search_uniparc.py
src/tooluniverse/tools/UniProt_search_uniref.py
src/tooluniverse/tools/UniRef_get_cluster.py
src/tooluniverse/tools/UniRef_search_clusters.py
src/tooluniverse/tools/UnifiedToolGenerator.py
src/tooluniverse/tools/Unpaywall_check_oa_status.py
src/tooluniverse/tools/VEuPathDB_list_gene_searches.py
src/tooluniverse/tools/VEuPathDB_list_organism_searches.py
src/tooluniverse/tools/VEuPathDB_list_record_types.py
src/tooluniverse/tools/VariantValidator_validate_variant.py
src/tooluniverse/tools/WAQI_get_air_quality.py
src/tooluniverse/tools/WFGY_triage_llm_rag_failure.py
src/tooluniverse/tools/WHOGHO_get_indicator_data.py
src/tooluniverse/tools/WHOGHO_search_indicators.py
src/tooluniverse/tools/WHO_Guideline_Full_Text.py
src/tooluniverse/tools/WHO_Guidelines_Search.py
src/tooluniverse/tools/WikiPathways_find_pathways_by_gene.py
src/tooluniverse/tools/WikiPathways_get_pathway.py
src/tooluniverse/tools/WikiPathways_get_pathway_genes.py
src/tooluniverse/tools/WikiPathways_search.py
src/tooluniverse/tools/Wikidata_SPARQL_query.py
src/tooluniverse/tools/Wikidata_get_entity.py
src/tooluniverse/tools/Wikidata_search_entities.py
src/tooluniverse/tools/Wikipedia_get_content.py
src/tooluniverse/tools/Wikipedia_get_featured_content.py
src/tooluniverse/tools/Wikipedia_get_summary.py
src/tooluniverse/tools/Wikipedia_search.py
src/tooluniverse/tools/WoRMS_search_species.py
src/tooluniverse/tools/WorldBank_get_country.py
src/tooluniverse/tools/WorldBank_get_indicator.py
src/tooluniverse/tools/WorldBank_search_indicators.py
src/tooluniverse/tools/WormBase_get_expression.py
src/tooluniverse/tools/WormBase_get_gene.py
src/tooluniverse/tools/WormBase_get_phenotypes.py
src/tooluniverse/tools/WritingPresentationReviewer.py
src/tooluniverse/tools/XMLToolOptimizer.py
src/tooluniverse/tools/ZFIN_get_allele.py
src/tooluniverse/tools/ZFIN_get_gene.py
src/tooluniverse/tools/ZFIN_get_gene_alleles.py
src/tooluniverse/tools/ZFIN_get_gene_expression.py
src/tooluniverse/tools/ZFIN_get_gene_orthologs.py
src/tooluniverse/tools/ZFIN_get_gene_phenotypes.py
src/tooluniverse/tools/ZINC_get_compound.py
src/tooluniverse/tools/ZINC_get_purchasable.py
src/tooluniverse/tools/ZINC_search_by_properties.py
src/tooluniverse/tools/ZINC_search_by_smiles.py
src/tooluniverse/tools/ZINC_search_compounds.py
src/tooluniverse/tools/Zenodo_get_license.py
src/tooluniverse/tools/Zenodo_get_record.py
src/tooluniverse/tools/Zenodo_get_record_files.py
src/tooluniverse/tools/Zenodo_list_licenses.py
src/tooluniverse/tools/Zenodo_search_records.py
src/tooluniverse/tools/__init__.py
src/tooluniverse/tools/_shared_client.py
src/tooluniverse/tools/advanced_literature_search_agent.py
src/tooluniverse/tools/alphafold_get_annotations.py
src/tooluniverse/tools/alphafold_get_prediction.py
src/tooluniverse/tools/alphafold_get_summary.py
src/tooluniverse/tools/arrayexpress_get_experiment.py
src/tooluniverse/tools/arrayexpress_get_experiment_files.py
src/tooluniverse/tools/arrayexpress_get_experiment_samples.py
src/tooluniverse/tools/arrayexpress_search_experiments.py
src/tooluniverse/tools/biomodels_search.py
src/tooluniverse/tools/biostudies_get_study.py
src/tooluniverse/tools/biostudies_get_study_files.py
src/tooluniverse/tools/biostudies_search.py
src/tooluniverse/tools/biostudies_search_by_collection.py
src/tooluniverse/tools/cBioPortal_get_cancer_studies.py
src/tooluniverse/tools/cBioPortal_get_cancer_types.py
src/tooluniverse/tools/cBioPortal_get_clinical_attributes.py
src/tooluniverse/tools/cBioPortal_get_clinical_data.py
src/tooluniverse/tools/cBioPortal_get_gene_info.py
src/tooluniverse/tools/cBioPortal_get_gene_panel_genes.py
src/tooluniverse/tools/cBioPortal_get_gene_panels.py
src/tooluniverse/tools/cBioPortal_get_genes.py
src/tooluniverse/tools/cBioPortal_get_molecular_profiles.py
src/tooluniverse/tools/cBioPortal_get_mutations.py
src/tooluniverse/tools/cBioPortal_get_patients.py
src/tooluniverse/tools/cBioPortal_get_sample_lists.py
src/tooluniverse/tools/cBioPortal_get_samples.py
src/tooluniverse/tools/call_agentic_human.py
src/tooluniverse/tools/cancer_biomarkers_disease_target_score.py
src/tooluniverse/tools/cancer_gene_census_disease_target_score.py
src/tooluniverse/tools/cdc_data_get_dataset.py
src/tooluniverse/tools/cdc_data_search_datasets.py
src/tooluniverse/tools/cellosaurus_get_cell_line_info.py
src/tooluniverse/tools/cellosaurus_query_converter.py
src/tooluniverse/tools/cellosaurus_search_cell_lines.py
src/tooluniverse/tools/chembl_disease_target_score.py
src/tooluniverse/tools/civic_get_assertion.py
src/tooluniverse/tools/civic_get_evidence_item.py
src/tooluniverse/tools/civic_get_molecular_profile.py
src/tooluniverse/tools/civic_get_variant.py
src/tooluniverse/tools/civic_get_variants_by_gene.py
src/tooluniverse/tools/civic_search_assertions.py
src/tooluniverse/tools/civic_search_diseases.py
src/tooluniverse/tools/civic_search_evidence_items.py
src/tooluniverse/tools/civic_search_genes.py
src/tooluniverse/tools/civic_search_molecular_profiles.py
src/tooluniverse/tools/civic_search_therapies.py
src/tooluniverse/tools/civic_search_variants.py
src/tooluniverse/tools/clinvar_get_clinical_significance.py
src/tooluniverse/tools/clinvar_get_variant_details.py
src/tooluniverse/tools/convert_to_markdown.py
src/tooluniverse/tools/dbSNP_get_variant_by_rsid.py
src/tooluniverse/tools/dbfetch_fetch_batch.py
src/tooluniverse/tools/dbfetch_fetch_entry.py
src/tooluniverse/tools/dbfetch_list_databases.py
src/tooluniverse/tools/dbfetch_list_formats.py
src/tooluniverse/tools/dbsnp_get_frequencies.py
src/tooluniverse/tools/dbsnp_search_by_gene.py
src/tooluniverse/tools/dict_search.py
src/tooluniverse/tools/dili_search.py
src/tooluniverse/tools/diqt_search.py
src/tooluniverse/tools/disease_target_score.py
src/tooluniverse/tools/download_binary_file.py
src/tooluniverse/tools/download_file.py
src/tooluniverse/tools/download_text_content.py
src/tooluniverse/tools/drugbank_filter_drugs_by_name.py
src/tooluniverse/tools/drugbank_full_search.py
src/tooluniverse/tools/drugbank_get_drug_basic_info_by_drug_name_or_id.py
src/tooluniverse/tools/drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_get_drug_desc_pharmacology_by_moa.py
src/tooluniverse/tools/drugbank_get_drug_interactions_by_drug_name_or_id.py
src/tooluniverse/tools/drugbank_get_drug_name_and_description_by_indication.py
src/tooluniverse/tools/drugbank_get_drug_name_and_description_by_pathway_name.py
src/tooluniverse/tools/drugbank_get_drug_name_and_description_by_target_name.py
src/tooluniverse/tools/drugbank_get_drug_products_by_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_get_drug_references_by_drug_name_or_id.py
src/tooluniverse/tools/drugbank_get_indications_by_drug_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_get_pathways_reactions_by_drug_or_id.py
src/tooluniverse/tools/drugbank_get_pharmacology_by_drug_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_get_safety_by_drug_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_get_targets_by_drug_name_or_drugbank_id.py
src/tooluniverse/tools/drugbank_links_search.py
src/tooluniverse/tools/drugbank_vocab_filter.py
src/tooluniverse/tools/drugbank_vocab_search.py
src/tooluniverse/tools/dynamic_package_discovery.py
src/tooluniverse/tools/eBird_get_taxon_groups.py
src/tooluniverse/tools/eBird_get_taxonomy.py
src/tooluniverse/tools/eMolecules_get_compound.py
src/tooluniverse/tools/eMolecules_get_vendors.py
src/tooluniverse/tools/eMolecules_search.py
src/tooluniverse/tools/eMolecules_search_smiles.py
src/tooluniverse/tools/eQTL_get_associations.py
src/tooluniverse/tools/eQTL_list_datasets.py
src/tooluniverse/tools/ebi_cross_reference_search.py
src/tooluniverse/tools/ebi_get_domain_fields.py
src/tooluniverse/tools/ebi_get_domain_info.py
src/tooluniverse/tools/ebi_get_entry.py
src/tooluniverse/tools/ebi_list_domains.py
src/tooluniverse/tools/ebi_search_domain.py
src/tooluniverse/tools/ebi_search_with_facets.py
src/tooluniverse/tools/embedding_database_add.py
src/tooluniverse/tools/embedding_database_create.py
src/tooluniverse/tools/embedding_database_search.py
src/tooluniverse/tools/embedding_sync_download.py
src/tooluniverse/tools/embedding_sync_upload.py
src/tooluniverse/tools/ena_get_entry.py
src/tooluniverse/tools/ena_get_entry_history.py
src/tooluniverse/tools/ena_get_entry_summary.py
src/tooluniverse/tools/ena_get_sequence_embl.py
src/tooluniverse/tools/ena_get_sequence_fasta.py
src/tooluniverse/tools/ena_get_sequence_xml.py
src/tooluniverse/tools/enrichr_gene_enrichment_analysis.py
src/tooluniverse/tools/ensembl_get_alignment.py
src/tooluniverse/tools/ensembl_get_archive.py
src/tooluniverse/tools/ensembl_get_genetree.py
src/tooluniverse/tools/ensembl_get_homology.py
src/tooluniverse/tools/ensembl_get_ontology_ancestors.py
src/tooluniverse/tools/ensembl_get_ontology_descendants.py
src/tooluniverse/tools/ensembl_get_ontology_term.py
src/tooluniverse/tools/ensembl_get_overlap_features.py
src/tooluniverse/tools/ensembl_get_regulatory_features.py
src/tooluniverse/tools/ensembl_get_sequence.py
src/tooluniverse/tools/ensembl_get_species.py
src/tooluniverse/tools/ensembl_get_structural_variants.py
src/tooluniverse/tools/ensembl_get_sv_detail.py
src/tooluniverse/tools/ensembl_get_taxonomy.py
src/tooluniverse/tools/ensembl_get_variants.py
src/tooluniverse/tools/ensembl_get_variation.py
src/tooluniverse/tools/ensembl_get_variation_phenotypes.py
src/tooluniverse/tools/ensembl_get_xrefs.py
src/tooluniverse/tools/ensembl_get_xrefs_by_name.py
src/tooluniverse/tools/ensembl_lookup_gene.py
src/tooluniverse/tools/ensembl_vep_region.py
src/tooluniverse/tools/euhealthinfo_deepdive.py
src/tooluniverse/tools/euhealthinfo_search_alcohol_tobacco_psychoactive_use.py
src/tooluniverse/tools/euhealthinfo_search_births.py
src/tooluniverse/tools/euhealthinfo_search_cancer.py
src/tooluniverse/tools/euhealthinfo_search_cancer_registry.py
src/tooluniverse/tools/euhealthinfo_search_causes_of_death.py
src/tooluniverse/tools/euhealthinfo_search_covid_19.py
src/tooluniverse/tools/euhealthinfo_search_deaths.py
src/tooluniverse/tools/euhealthinfo_search_diabetes_epidemiology_registry.py
src/tooluniverse/tools/euhealthinfo_search_disability.py
src/tooluniverse/tools/euhealthinfo_search_healthcare_expenditure.py
src/tooluniverse/tools/euhealthinfo_search_hospital_in_patient_data.py
src/tooluniverse/tools/euhealthinfo_search_infectious_diseases.py
src/tooluniverse/tools/euhealthinfo_search_key_indicators_registries_surveys.py
src/tooluniverse/tools/euhealthinfo_search_mental_health.py
src/tooluniverse/tools/euhealthinfo_search_obesity.py
src/tooluniverse/tools/euhealthinfo_search_population_health_survey.py
src/tooluniverse/tools/euhealthinfo_search_primary_care_workforce.py
src/tooluniverse/tools/euhealthinfo_search_surveillance.py
src/tooluniverse/tools/euhealthinfo_search_surveillance_mortality_rates.py
src/tooluniverse/tools/euhealthinfo_search_vaccination.py
src/tooluniverse/tools/europepmc_disease_target_score.py
src/tooluniverse/tools/eva_disease_target_score.py
src/tooluniverse/tools/eva_somatic_disease_target_score.py
src/tooluniverse/tools/execute_tool.py
src/tooluniverse/tools/expression_atlas_disease_target_score.py
src/tooluniverse/tools/extract_clinical_trial_adverse_events.py
src/tooluniverse/tools/extract_clinical_trial_outcomes.py
src/tooluniverse/tools/fda_pharmacogenomic_biomarkers.py
src/tooluniverse/tools/gProfiler_annotate_snps.py
src/tooluniverse/tools/gProfiler_convert_ids.py
src/tooluniverse/tools/gProfiler_enrichment.py
src/tooluniverse/tools/gProfiler_find_orthologs.py
src/tooluniverse/tools/genomics_england_disease_target_score.py
src/tooluniverse/tools/geo_get_dataset_info.py
src/tooluniverse/tools/geo_get_sample_info.py
src/tooluniverse/tools/geo_search_datasets.py
src/tooluniverse/tools/get_HPO_ID_by_phenotype.py
src/tooluniverse/tools/get_albumentations_info.py
src/tooluniverse/tools/get_altair_info.py
src/tooluniverse/tools/get_anndata_info.py
src/tooluniverse/tools/get_arboreto_info.py
src/tooluniverse/tools/get_arxiv_info.py
src/tooluniverse/tools/get_ase_info.py
src/tooluniverse/tools/get_assembly_info_by_pdb_id.py
src/tooluniverse/tools/get_assembly_summary.py
src/tooluniverse/tools/get_associated_documents_metadata.py
src/tooluniverse/tools/get_astropy_info.py
src/tooluniverse/tools/get_binding_affinity_by_pdb_id.py
src/tooluniverse/tools/get_biopandas_info.py
src/tooluniverse/tools/get_biopython_info.py
src/tooluniverse/tools/get_bioservices_info.py
src/tooluniverse/tools/get_biotite_info.py
src/tooluniverse/tools/get_bokeh_info.py
src/tooluniverse/tools/get_brian2_info.py
src/tooluniverse/tools/get_cartopy_info.py
src/tooluniverse/tools/get_catboost_info.py
src/tooluniverse/tools/get_cellpose_info.py
src/tooluniverse/tools/get_cellrank_info.py
src/tooluniverse/tools/get_cellxgene_census_info.py
src/tooluniverse/tools/get_cftime_info.py
src/tooluniverse/tools/get_chem_comp_audit_info.py
src/tooluniverse/tools/get_chem_comp_charge_and_ambiguity.py
src/tooluniverse/tools/get_chembl_webresource_client_info.py
src/tooluniverse/tools/get_citation_info_by_pdb_id.py
src/tooluniverse/tools/get_clair3_info.py
src/tooluniverse/tools/get_clinical_trial_conditions_and_interventions.py
src/tooluniverse/tools/get_clinical_trial_descriptions.py
src/tooluniverse/tools/get_clinical_trial_eligibility_criteria.py
src/tooluniverse/tools/get_clinical_trial_locations.py
src/tooluniverse/tools/get_clinical_trial_outcome_measures.py
src/tooluniverse/tools/get_clinical_trial_references.py
src/tooluniverse/tools/get_clinical_trial_status_and_dates.py
src/tooluniverse/tools/get_cobra_info.py
src/tooluniverse/tools/get_cobrapy_info.py
src/tooluniverse/tools/get_cooler_info.py
src/tooluniverse/tools/get_core_refinement_statistics.py
src/tooluniverse/tools/get_cryosparc_tools_info.py
src/tooluniverse/tools/get_crystal_growth_conditions_by_pdb_id.py
src/tooluniverse/tools/get_crystallization_ph_by_pdb_id.py
src/tooluniverse/tools/get_crystallographic_properties_by_pdb_id.py
src/tooluniverse/tools/get_cupy_info.py
src/tooluniverse/tools/get_cyvcf2_info.py
src/tooluniverse/tools/get_dask_info.py
src/tooluniverse/tools/get_datamol_info.py
src/tooluniverse/tools/get_datashader_info.py
src/tooluniverse/tools/get_deepchem_info.py
src/tooluniverse/tools/get_deeppurpose_info.py
src/tooluniverse/tools/get_deeptools_info.py
src/tooluniverse/tools/get_deepxde_info.py
src/tooluniverse/tools/get_dendropy_info.py
src/tooluniverse/tools/get_descriptastorus_info.py
src/tooluniverse/tools/get_diffdock_info.py
src/tooluniverse/tools/get_dscribe_info.py
src/tooluniverse/tools/get_ec_number_by_entity_id.py
src/tooluniverse/tools/get_elephant_info.py
src/tooluniverse/tools/get_em_3d_fitting_and_reconstruction_details.py
src/tooluniverse/tools/get_emdb_ids_by_pdb_id.py
src/tooluniverse/tools/get_episcanpy_info.py
src/tooluniverse/tools/get_ete3_info.py
src/tooluniverse/tools/get_faiss_info.py
src/tooluniverse/tools/get_fanc_info.py
src/tooluniverse/tools/get_flask_info.py
src/tooluniverse/tools/get_flowio_info.py
src/tooluniverse/tools/get_flowkit_info.py
src/tooluniverse/tools/get_flowutils_info.py
src/tooluniverse/tools/get_freesasa_info.py
src/tooluniverse/tools/get_galpy_info.py
src/tooluniverse/tools/get_gene_name_by_entity_id.py
src/tooluniverse/tools/get_geopandas_info.py
src/tooluniverse/tools/get_gget_info.py
src/tooluniverse/tools/get_googlesearch_python_info.py
src/tooluniverse/tools/get_gseapy_info.py
src/tooluniverse/tools/get_h5py_info.py
src/tooluniverse/tools/get_harmony_pytorch_info.py
src/tooluniverse/tools/get_hmmlearn_info.py
src/tooluniverse/tools/get_holoviews_info.py
src/tooluniverse/tools/get_host_organism_by_pdb_id.py
src/tooluniverse/tools/get_htmd_info.py
src/tooluniverse/tools/get_igraph_info.py
src/tooluniverse/tools/get_imageio_info.py
src/tooluniverse/tools/get_imbalanced_learn_info.py
src/tooluniverse/tools/get_jcvi_info.py
src/tooluniverse/tools/get_joblib_info.py
src/tooluniverse/tools/get_joint_associated_diseases_by_HPO_ID_list.py
src/tooluniverse/tools/get_khmer_info.py
src/tooluniverse/tools/get_kipoiseq_info.py
src/tooluniverse/tools/get_lifelines_info.py
src/tooluniverse/tools/get_ligand_bond_count_by_pdb_id.py
src/tooluniverse/tools/get_ligand_smiles_by_chem_comp_id.py
src/tooluniverse/tools/get_lightgbm_info.py
src/tooluniverse/tools/get_loompy_info.py
src/tooluniverse/tools/get_mageck_info.py
src/tooluniverse/tools/get_matplotlib_info.py
src/tooluniverse/tools/get_mdanalysis_info.py
src/tooluniverse/tools/get_mdtraj_info.py
src/tooluniverse/tools/get_mne_info.py
src/tooluniverse/tools/get_molfeat_info.py
src/tooluniverse/tools/get_molvs_info.py
src/tooluniverse/tools/get_mordred_info.py
src/tooluniverse/tools/get_msprime_info.py
src/tooluniverse/tools/get_mudata_info.py
src/tooluniverse/tools/get_mutation_annotations_by_pdb_id.py
src/tooluniverse/tools/get_neo_info.py
src/tooluniverse/tools/get_netcdf4_info.py
src/tooluniverse/tools/get_networkx_info.py
src/tooluniverse/tools/get_nglview_info.py
src/tooluniverse/tools/get_nilearn_info.py
src/tooluniverse/tools/get_numba_info.py
src/tooluniverse/tools/get_numpy_info.py
src/tooluniverse/tools/get_oligosaccharide_descriptors_by_entity_id.py
src/tooluniverse/tools/get_openbabel_info.py
src/tooluniverse/tools/get_openchem_info.py
src/tooluniverse/tools/get_opencv_info.py
src/tooluniverse/tools/get_openmm_info.py
src/tooluniverse/tools/get_optlang_info.py
src/tooluniverse/tools/get_optuna_info.py
src/tooluniverse/tools/get_palantir_info.py
src/tooluniverse/tools/get_pandas_info.py
src/tooluniverse/tools/get_patent_application_metadata.py
src/tooluniverse/tools/get_patent_continuity_data.py
src/tooluniverse/tools/get_patent_foreign_priority_data.py
src/tooluniverse/tools/get_patent_overview_by_text_query.py
src/tooluniverse/tools/get_patent_term_adjustment_data.py
src/tooluniverse/tools/get_patsy_info.py
src/tooluniverse/tools/get_pdbfixer_info.py
src/tooluniverse/tools/get_phenotype_by_HPO_ID.py
src/tooluniverse/tools/get_pillow_info.py
src/tooluniverse/tools/get_plantcv_info.py
src/tooluniverse/tools/get_plip_info.py
src/tooluniverse/tools/get_plotly_info.py
src/tooluniverse/tools/get_poliastro_info.py
src/tooluniverse/tools/get_polymer_entity_annotations.py
src/tooluniverse/tools/get_polymer_entity_count_by_pdb_id.py
src/tooluniverse/tools/get_polymer_entity_ids_by_pdb_id.py
src/tooluniverse/tools/get_polymer_entity_type_by_entity_id.py
src/tooluniverse/tools/get_polymer_molecular_weight_by_entity_id.py
src/tooluniverse/tools/get_poretools_info.py
src/tooluniverse/tools/get_prody_info.py
src/tooluniverse/tools/get_protein_classification_by_pdb_id.py
src/tooluniverse/tools/get_protein_metadata_by_pdb_id.py
src/tooluniverse/tools/get_pubchempy_info.py
src/tooluniverse/tools/get_pybedtools_info.py
src/tooluniverse/tools/get_pybigwig_info.py
src/tooluniverse/tools/get_pydeseq2_info.py
src/tooluniverse/tools/get_pyensembl_info.py
src/tooluniverse/tools/get_pyephem_info.py
src/tooluniverse/tools/get_pyfaidx_info.py
src/tooluniverse/tools/get_pyfasta_info.py
src/tooluniverse/tools/get_pykalman_info.py
src/tooluniverse/tools/get_pyliftover_info.py
src/tooluniverse/tools/get_pymassspec_info.py
src/tooluniverse/tools/get_pymed_info.py
src/tooluniverse/tools/get_pymzml_info.py
src/tooluniverse/tools/get_pypdf2_info.py
src/tooluniverse/tools/get_pyranges_info.py
src/tooluniverse/tools/get_pyrosetta_info.py
src/tooluniverse/tools/get_pysam_info.py
src/tooluniverse/tools/get_pyscenic_info.py
src/tooluniverse/tools/get_pyscf_info.py
src/tooluniverse/tools/get_pyscreener_info.py
src/tooluniverse/tools/get_pytdc_info.py
src/tooluniverse/tools/get_python_libsbml_info.py
src/tooluniverse/tools/get_pytorch_info.py
src/tooluniverse/tools/get_pyvcf_info.py
src/tooluniverse/tools/get_pyvis_info.py
src/tooluniverse/tools/get_qutip_info.py
src/tooluniverse/tools/get_rasterio_info.py
src/tooluniverse/tools/get_rdkit_info.py
src/tooluniverse/tools/get_refinement_resolution_by_pdb_id.py
src/tooluniverse/tools/get_release_deposit_dates_by_pdb_id.py
src/tooluniverse/tools/get_reportlab_info.py
src/tooluniverse/tools/get_requests_info.py
src/tooluniverse/tools/get_ruptures_info.py
src/tooluniverse/tools/get_scanorama_info.py
src/tooluniverse/tools/get_scanpy_info.py
src/tooluniverse/tools/get_schnetpack_info.py
src/tooluniverse/tools/get_scholarly_info.py
src/tooluniverse/tools/get_scikit_bio_info.py
src/tooluniverse/tools/get_scikit_image_info.py
src/tooluniverse/tools/get_scikit_learn_info.py
src/tooluniverse/tools/get_scipy_info.py
src/tooluniverse/tools/get_scrublet_info.py
src/tooluniverse/tools/get_scvelo_info.py
src/tooluniverse/tools/get_scvi_tools_info.py
src/tooluniverse/tools/get_seaborn_info.py
src/tooluniverse/tools/get_sequence_by_pdb_id.py
src/tooluniverse/tools/get_sequence_lengths_by_pdb_id.py
src/tooluniverse/tools/get_sequence_positional_features_by_instance_id.py
src/tooluniverse/tools/get_skopt_info.py
src/tooluniverse/tools/get_souporcell_info.py
src/tooluniverse/tools/get_source_organism_by_pdb_id.py
src/tooluniverse/tools/get_space_group_by_pdb_id.py
src/tooluniverse/tools/get_statsmodels_info.py
src/tooluniverse/tools/get_structure_determination_software_by_pdb_id.py
src/tooluniverse/tools/get_structure_title_by_pdb_id.py
src/tooluniverse/tools/get_structure_validation_metrics_by_pdb_id.py
src/tooluniverse/tools/get_sunpy_info.py
src/tooluniverse/tools/get_sympy_info.py
src/tooluniverse/tools/get_target_cofactor_info.py
src/tooluniverse/tools/get_taxonomy_by_pdb_id.py
src/tooluniverse/tools/get_tiledb_info.py
src/tooluniverse/tools/get_tiledbsoma_info.py
src/tooluniverse/tools/get_tool_info.py
src/tooluniverse/tools/get_torch_geometric_info.py
src/tooluniverse/tools/get_tqdm_info.py
src/tooluniverse/tools/get_trackpy_info.py
src/tooluniverse/tools/get_tskit_info.py
src/tooluniverse/tools/get_umap_learn_info.py
src/tooluniverse/tools/get_uniprot_accession_by_entity_id.py
src/tooluniverse/tools/get_velocyto_info.py
src/tooluniverse/tools/get_viennarna_info.py
src/tooluniverse/tools/get_webpage_text_from_url.py
src/tooluniverse/tools/get_webpage_title.py
src/tooluniverse/tools/get_xarray_info.py
src/tooluniverse/tools/get_xesmf_info.py
src/tooluniverse/tools/get_xgboost_info.py
src/tooluniverse/tools/get_zarr_info.py
src/tooluniverse/tools/gnomad_get_gene.py
src/tooluniverse/tools/gnomad_get_gene_constraints.py
src/tooluniverse/tools/gnomad_get_region.py
src/tooluniverse/tools/gnomad_get_sv_by_gene.py
src/tooluniverse/tools/gnomad_get_sv_by_region.py
src/tooluniverse/tools/gnomad_get_sv_detail.py
src/tooluniverse/tools/gnomad_get_transcript.py
src/tooluniverse/tools/gnomad_get_variant.py
src/tooluniverse/tools/gnomad_search_genes.py
src/tooluniverse/tools/gnomad_search_variants.py
src/tooluniverse/tools/grep_tools.py
src/tooluniverse/tools/gwas_get_association_by_id.py
src/tooluniverse/tools/gwas_get_associations_for_snp.py
src/tooluniverse/tools/gwas_get_associations_for_study.py
src/tooluniverse/tools/gwas_get_associations_for_trait.py
src/tooluniverse/tools/gwas_get_snp_by_id.py
src/tooluniverse/tools/gwas_get_snps_for_gene.py
src/tooluniverse/tools/gwas_get_studies_for_trait.py
src/tooluniverse/tools/gwas_get_study_by_id.py
src/tooluniverse/tools/gwas_get_variants_for_trait.py
src/tooluniverse/tools/gwas_search_associations.py
src/tooluniverse/tools/gwas_search_snps.py
src/tooluniverse/tools/gwas_search_studies.py
src/tooluniverse/tools/hca_get_file_manifest.py
src/tooluniverse/tools/hca_search_projects.py
src/tooluniverse/tools/health_disparities_get_county_rankings_info.py
src/tooluniverse/tools/health_disparities_get_svi_info.py
src/tooluniverse/tools/humanbase_ppi_analysis.py
src/tooluniverse/tools/iCite_get_publications.py
src/tooluniverse/tools/iCite_search_publications.py
src/tooluniverse/tools/iDigBio_search_records.py
src/tooluniverse/tools/iNaturalist_get_species_counts.py
src/tooluniverse/tools/iNaturalist_get_taxon.py
src/tooluniverse/tools/iNaturalist_search_observations.py
src/tooluniverse/tools/iNaturalist_search_taxa.py
src/tooluniverse/tools/icd_search_codes.py
src/tooluniverse/tools/iedb_get_epitope_antigens.py
src/tooluniverse/tools/iedb_get_epitope_mhc.py
src/tooluniverse/tools/iedb_get_epitope_references.py
src/tooluniverse/tools/iedb_search_antigens.py
src/tooluniverse/tools/iedb_search_bcell.py
src/tooluniverse/tools/iedb_search_epitopes.py
src/tooluniverse/tools/iedb_search_mhc.py
src/tooluniverse/tools/iedb_search_references.py
src/tooluniverse/tools/intact_get_complex_details.py
src/tooluniverse/tools/intact_get_interaction_details.py
src/tooluniverse/tools/intact_get_interaction_network.py
src/tooluniverse/tools/intact_get_interactions.py
src/tooluniverse/tools/intact_get_interactions_by_complex.py
src/tooluniverse/tools/intact_get_interactions_by_organism.py
src/tooluniverse/tools/intact_get_interactor.py
src/tooluniverse/tools/intact_search_interactions.py
src/tooluniverse/tools/jaspar_get_matrix.py
src/tooluniverse/tools/jaspar_get_matrix_versions.py
src/tooluniverse/tools/jaspar_list_collections.py
src/tooluniverse/tools/jaspar_list_releases.py
src/tooluniverse/tools/jaspar_list_species.py
src/tooluniverse/tools/jaspar_list_taxa.py
src/tooluniverse/tools/jaspar_search_matrices.py
src/tooluniverse/tools/kegg_find_genes.py
src/tooluniverse/tools/kegg_get_gene_info.py
src/tooluniverse/tools/kegg_get_pathway_info.py
src/tooluniverse/tools/kegg_list_organisms.py
src/tooluniverse/tools/kegg_search_pathway.py
src/tooluniverse/tools/list_tools.py
src/tooluniverse/tools/loinc_search_codes.py
src/tooluniverse/tools/mcp_auto_loader_boltz.py
src/tooluniverse/tools/mcp_auto_loader_expert_feedback.py
src/tooluniverse/tools/mcp_auto_loader_txagent.py
src/tooluniverse/tools/mcp_auto_loader_uspto_downloader.py
src/tooluniverse/tools/mesh_get_subjects_by_pharmacological_action.py
src/tooluniverse/tools/mesh_get_subjects_by_subject_id.py
src/tooluniverse/tools/mesh_get_subjects_by_subject_name.py
src/tooluniverse/tools/mesh_get_subjects_by_subject_scope_or_definition.py
src/tooluniverse/tools/metabolights_get_study.py
src/tooluniverse/tools/metabolights_get_study_assays.py
src/tooluniverse/tools/metabolights_get_study_data_files.py
src/tooluniverse/tools/metabolights_get_study_factors.py
src/tooluniverse/tools/metabolights_get_study_files.py
src/tooluniverse/tools/metabolights_get_study_protocols.py
src/tooluniverse/tools/metabolights_get_study_samples.py
src/tooluniverse/tools/metabolights_list_studies.py
src/tooluniverse/tools/metabolights_search_studies.py
src/tooluniverse/tools/miRBase_get_mirna.py
src/tooluniverse/tools/miRBase_get_mirna_publications.py
src/tooluniverse/tools/miRBase_get_mirna_xrefs.py
src/tooluniverse/tools/miRBase_search_mirna.py
src/tooluniverse/tools/nhanes_get_dataset_info.py
src/tooluniverse/tools/nhanes_search_datasets.py
src/tooluniverse/tools/odphp_itemlist.py
src/tooluniverse/tools/odphp_myhealthfinder.py
src/tooluniverse/tools/odphp_outlink_fetch.py
src/tooluniverse/tools/odphp_topicsearch.py
src/tooluniverse/tools/ols_find_similar_terms.py
src/tooluniverse/tools/ols_get_efo_ontology_info.py
src/tooluniverse/tools/ols_get_efo_term.py
src/tooluniverse/tools/ols_get_efo_term_children.py
src/tooluniverse/tools/ols_get_ontology_info.py
src/tooluniverse/tools/ols_get_term_ancestors.py
src/tooluniverse/tools/ols_get_term_children.py
src/tooluniverse/tools/ols_get_term_info.py
src/tooluniverse/tools/ols_list_ontologies.py
src/tooluniverse/tools/ols_search_efo_terms.py
src/tooluniverse/tools/ols_search_ontologies.py
src/tooluniverse/tools/ols_search_terms.py
src/tooluniverse/tools/open_deep_research_agent.py
src/tooluniverse/tools/openalex_get_author.py
src/tooluniverse/tools/openalex_get_institution.py
src/tooluniverse/tools/openalex_get_work.py
src/tooluniverse/tools/openalex_get_work_by_doi.py
src/tooluniverse/tools/openalex_literature_search.py
src/tooluniverse/tools/openalex_search_authors.py
src/tooluniverse/tools/openalex_search_institutions.py
src/tooluniverse/tools/openalex_search_works.py
src/tooluniverse/tools/pc_get_interactions.py
src/tooluniverse/tools/pc_search_pathways.py
src/tooluniverse/tools/pdbe_get_entry_assemblies.py
src/tooluniverse/tools/pdbe_get_entry_experiment.py
src/tooluniverse/tools/pdbe_get_entry_molecules.py
src/tooluniverse/tools/pdbe_get_entry_observed_residues_ratio.py
src/tooluniverse/tools/pdbe_get_entry_publications.py
src/tooluniverse/tools/pdbe_get_entry_quality.py
src/tooluniverse/tools/pdbe_get_entry_related_publications.py
src/tooluniverse/tools/pdbe_get_entry_secondary_structure.py
src/tooluniverse/tools/pdbe_get_entry_status.py
src/tooluniverse/tools/pdbe_get_entry_summary.py
src/tooluniverse/tools/proteins_api_get_comments.py
src/tooluniverse/tools/proteins_api_get_epitopes.py
src/tooluniverse/tools/proteins_api_get_features.py
src/tooluniverse/tools/proteins_api_get_genome_mappings.py
src/tooluniverse/tools/proteins_api_get_protein.py
src/tooluniverse/tools/proteins_api_get_proteomics.py
src/tooluniverse/tools/proteins_api_get_publications.py
src/tooluniverse/tools/proteins_api_get_variants.py
src/tooluniverse/tools/proteins_api_get_xrefs.py
src/tooluniverse/tools/proteins_api_search.py
src/tooluniverse/tools/python_code_executor.py
src/tooluniverse/tools/python_script_runner.py
src/tooluniverse/tools/reactome_disease_target_score.py
src/tooluniverse/tools/scite_get_tallies.py
src/tooluniverse/tools/search_clinical_trials.py
src/tooluniverse/tools/snomed_search_concepts.py
src/tooluniverse/tools/umls_get_concept_details.py
src/tooluniverse/tools/umls_search_concepts.py
src/tooluniverse/tools/visualize_molecule_2d.py
src/tooluniverse/tools/visualize_molecule_3d.py
src/tooluniverse/tools/visualize_protein_structure_3d.py
src/tooluniverse/tools/web_api_documentation_search.py
src/tooluniverse/tools/web_search.py
tests/test_agentic_tool_env_vars.py
tests/test_async_base.py
tests/test_cache_bug_fixes.py
tests/test_cache_manager.py
tests/test_edge_cases.py
tests/test_http_api_server.py
tests/test_http_api_thread_pool.py
tests/test_lazy_load_cache_consistency.py
tests/test_mcp_tasks_integration.py
tests/test_stdio_hooks.py
tests/test_task_manager.py
tests/test_tool_name_shortening.py
tests/test_toolspace_loader.py
tests/test_toolspace_validator.py
tests/test_tooluniverse_cache_integration.py
tests/test_unified_async_api.py