LICENSE
MANIFEST.in
README.rst
requirements-aws.txt
requirements-cwl.txt
requirements-dev.txt
requirements-encryption.txt
requirements-google.txt
requirements-htcondor.txt
requirements-kubernetes.txt
requirements-mesos.txt
requirements-server.txt
requirements-wdl.txt
requirements.txt
setup.cfg
setup.py
src/toil/__init__.py
src/toil/bus.py
src/toil/common.py
src/toil/deferred.py
src/toil/job.py
src/toil/leader.py
src/toil/realtimeLogger.py
src/toil/resource.py
src/toil/serviceManager.py
src/toil/statsAndLogging.py
src/toil/toilState.py
src/toil/version.py
src/toil/worker.py
src/toil.egg-info/PKG-INFO
src/toil.egg-info/SOURCES.txt
src/toil.egg-info/dependency_links.txt
src/toil.egg-info/entry_points.txt
src/toil.egg-info/requires.txt
src/toil.egg-info/top_level.txt
src/toil/batchSystems/__init__.py
src/toil/batchSystems/abstractBatchSystem.py
src/toil/batchSystems/abstractGridEngineBatchSystem.py
src/toil/batchSystems/cleanup_support.py
src/toil/batchSystems/contained_executor.py
src/toil/batchSystems/gridengine.py
src/toil/batchSystems/htcondor.py
src/toil/batchSystems/kubernetes.py
src/toil/batchSystems/local_support.py
src/toil/batchSystems/lsf.py
src/toil/batchSystems/lsfHelper.py
src/toil/batchSystems/options.py
src/toil/batchSystems/parasol.py
src/toil/batchSystems/registry.py
src/toil/batchSystems/singleMachine.py
src/toil/batchSystems/slurm.py
src/toil/batchSystems/tes.py
src/toil/batchSystems/torque.py
src/toil/batchSystems/mesos/__init__.py
src/toil/batchSystems/mesos/batchSystem.py
src/toil/batchSystems/mesos/conftest.py
src/toil/batchSystems/mesos/executor.py
src/toil/batchSystems/mesos/test/__init__.py
src/toil/cwl/__init__.py
src/toil/cwl/conftest.py
src/toil/cwl/cwltoil.py
src/toil/cwl/utils.py
src/toil/fileStores/__init__.py
src/toil/fileStores/abstractFileStore.py
src/toil/fileStores/cachingFileStore.py
src/toil/fileStores/nonCachingFileStore.py
src/toil/jobStores/__init__.py
src/toil/jobStores/abstractJobStore.py
src/toil/jobStores/conftest.py
src/toil/jobStores/fileJobStore.py
src/toil/jobStores/googleJobStore.py
src/toil/jobStores/utils.py
src/toil/jobStores/aws/__init__.py
src/toil/jobStores/aws/jobStore.py
src/toil/jobStores/aws/utils.py
src/toil/lib/__init__.py
src/toil/lib/bioio.py
src/toil/lib/compatibility.py
src/toil/lib/conversions.py
src/toil/lib/docker.py
src/toil/lib/ec2.py
src/toil/lib/ec2nodes.py
src/toil/lib/exceptions.py
src/toil/lib/expando.py
src/toil/lib/generatedEC2Lists.py
src/toil/lib/humanize.py
src/toil/lib/io.py
src/toil/lib/iterables.py
src/toil/lib/memoize.py
src/toil/lib/misc.py
src/toil/lib/objects.py
src/toil/lib/resources.py
src/toil/lib/retry.py
src/toil/lib/threading.py
src/toil/lib/throttle.py
src/toil/lib/aws/__init__.py
src/toil/lib/aws/ami.py
src/toil/lib/aws/utils.py
src/toil/lib/encryption/__init__.py
src/toil/lib/encryption/_dummy.py
src/toil/lib/encryption/_nacl.py
src/toil/lib/encryption/conftest.py
src/toil/provisioners/__init__.py
src/toil/provisioners/abstractProvisioner.py
src/toil/provisioners/clusterScaler.py
src/toil/provisioners/gceProvisioner.py
src/toil/provisioners/node.py
src/toil/provisioners/aws/__init__.py
src/toil/provisioners/aws/awsProvisioner.py
src/toil/server/__init__.py
src/toil/server/app.py
src/toil/server/celery_app.py
src/toil/server/utils.py
src/toil/server/wsgi_app.py
src/toil/server/api_spec/__init__.py
src/toil/server/api_spec/workflow_execution_service.swagger.yaml
src/toil/server/wes/__init__.py
src/toil/server/wes/abstract_backend.py
src/toil/server/wes/tasks.py
src/toil/server/wes/toil_backend.py
src/toil/test/__init__.py
src/toil/utils/__init__.py
src/toil/utils/toilClean.py
src/toil/utils/toilDebugFile.py
src/toil/utils/toilDebugJob.py
src/toil/utils/toilDestroyCluster.py
src/toil/utils/toilKill.py
src/toil/utils/toilLaunchCluster.py
src/toil/utils/toilMain.py
src/toil/utils/toilRsyncCluster.py
src/toil/utils/toilServer.py
src/toil/utils/toilSshCluster.py
src/toil/utils/toilStats.py
src/toil/utils/toilStatus.py
src/toil/utils/toilUpdateEC2Instances.py
src/toil/wdl/__init__.py
src/toil/wdl/toilwdl.py
src/toil/wdl/utils.py
src/toil/wdl/wdl_analysis.py
src/toil/wdl/wdl_functions.py
src/toil/wdl/wdl_synthesis.py
src/toil/wdl/wdl_types.py
src/toil/wdl/versions/__init__.py
src/toil/wdl/versions/dev.py
src/toil/wdl/versions/draft2.py
src/toil/wdl/versions/v1.py