cff-version: 1.2.0
message: "If you use this software, please cite it as below."
title: "TIRmite: Annotation of cryptic DNA-transposon variants with Hidden Markov Models."
version: 1.3.0
date-released: 2026-01-14
authors:
  - family-names: Taranto
    given-names: Adam
    orcid: https://orcid.org/0000-0003-4759-3475
    affiliation: "The University of Melbourne"
repository-code: "https://github.com/Adamtaranto/TIRmite"
license: MIT
abstract: >-
  "TIRmite enables the annotation of cryptic transposon variants by using profile Hidden Markov Models of conserved termini to identify highly divergent family members."
keywords:
  - genomics
  - transposons
  - bioinformatics
preferred-citation:
  type: software
  authors:
    - family-names: Taranto
      given-names: Adam
      orcid: https://orcid.org/0000-0003-4759-3475
      affiliation: "The University of Melbourne"
  title: "TIRmite: Annotation of cryptic transposon variants using Hidden Markov Models."
  year: 2026
  url: "https://github.com/Adamtaranto/TIRmite"
  repository-code: "https://github.com/Adamtaranto/TIRmite"
  # doi: TBA
