CHANGELOG.md
MANIFEST.in
README.md
pyproject.toml
requirements.txt
setup.py
simple_tic_env.yml
.github/workflows/version_release_workflow.yml
src/ticlust/__init__.py
src/ticlust/__main__.py
src/ticlust/_version.py
src/ticlust/cli.py
src/ticlust/core_api.py
src/ticlust/install_hooks.py
src/ticlust/logger.py
src/ticlust/ticlust.py
src/ticlust.egg-info/PKG-INFO
src/ticlust.egg-info/SOURCES.txt
src/ticlust.egg-info/dependency_links.txt
src/ticlust.egg-info/entry_points.txt
src/ticlust.egg-info/requires.txt
src/ticlust.egg-info/top_level.txt
src/ticlust/bin/vsearch
src/ticlust/ticlust_helper/__init__.py
src/ticlust/ticlust_helper/config.py
src/ticlust/ticlust_helper/get_vsearch.py
src/ticlust/ticlust_helper/utils.py
test/All_known_order_500_sequences.fasta
test/All_known_order_500_table.tab
test/Minor_pseudo_sequences.fasta
test/Mixed_kingdoms_1K_V3-V4_sequences.fasta
test/Mixed_kingdoms_1K_V3-V4_table.tab
test/__init__.py
test/input_sequences.fasta
test/pytest.ini
test/ticlust_test.py