LICENSE
README.rst
setup.py
docs/__init__.py
examples/__init__.py
examples/graph_model_optimization.py
examples/profiler_example.py
examples/viz_with_labels.py
examples/adaptive_optimizer/__init__.py
examples/adaptive_optimizer/context_mab_experiment_different_targets.py
examples/adaptive_optimizer/experiment_setup.py
examples/adaptive_optimizer/mab_experiment_different_targets.py
examples/adaptive_optimizer/neural_mab_experiment_different_targets.py
examples/adaptive_optimizer/utils.py
examples/experiment_analyzer/__init__.py
examples/experiment_analyzer/experiment_analyzer.py
examples/experiment_launcher/__init__.py
examples/experiment_launcher/experiment_launcher.py
examples/molecule_search/__init__.py
examples/molecule_search/constants.py
examples/molecule_search/experiment.py
examples/molecule_search/guacamol_benchmark.py
examples/molecule_search/mol_adapter.py
examples/molecule_search/mol_advisor.py
examples/molecule_search/mol_encoders.py
examples/molecule_search/mol_graph.py
examples/molecule_search/mol_graph_parameters.py
examples/molecule_search/mol_metrics.py
examples/molecule_search/mol_mutations.py
examples/molecule_search/utils.py
examples/molecule_search/mol_transformer/__init__.py
examples/molecule_search/mol_transformer/transformer.py
examples/structural_analysis/__init__.py
examples/structural_analysis/opt_graph_optimization.py
examples/synthetic_graph_evolution/__init__.py
examples/synthetic_graph_evolution/experiment_setup.py
examples/synthetic_graph_evolution/generators.py
examples/synthetic_graph_evolution/graph_search.py
examples/synthetic_graph_evolution/simple_run.py
examples/synthetic_graph_evolution/tree_search.py
examples/synthetic_graph_evolution/utils.py
experiments/__init__.py
experiments/experiment_analyzer.py
experiments/experiment_launcher.py
experiments/mab/__init__.py
experiments/mab/mab_synthetic_experiment_helper.py
experiments/mab/experiment_with_fickle_mutations/__init__.py
experiments/mab/experiment_with_fickle_mutations/fickle_mutations.py
experiments/mab/experiment_with_fickle_mutations/mab_experiment_with_fickle_mutations.py
golem/__init__.py
golem/core/__init__.py
golem/core/constants.py
golem/core/log.py
golem/core/paths.py
golem/core/adapter/__init__.py
golem/core/adapter/adapt_registry.py
golem/core/adapter/adapter.py
golem/core/adapter/nx_adapter.py
golem/core/dag/__init__.py
golem/core/dag/convert.py
golem/core/dag/graph.py
golem/core/dag/graph_delegate.py
golem/core/dag/graph_node.py
golem/core/dag/graph_utils.py
golem/core/dag/graph_verifier.py
golem/core/dag/linked_graph.py
golem/core/dag/linked_graph_node.py
golem/core/dag/verification_rules.py
golem/core/optimisers/__init__.py
golem/core/optimisers/advisor.py
golem/core/optimisers/graph.py
golem/core/optimisers/graph_builder.py
golem/core/optimisers/initial_graphs_generator.py
golem/core/optimisers/opt_graph_builder.py
golem/core/optimisers/opt_node_factory.py
golem/core/optimisers/optimization_parameters.py
golem/core/optimisers/optimizer.py
golem/core/optimisers/populational_optimizer.py
golem/core/optimisers/random_graph_factory.py
golem/core/optimisers/timer.py
golem/core/optimisers/adaptive/__init__.py
golem/core/optimisers/adaptive/agent_trainer.py
golem/core/optimisers/adaptive/common_types.py
golem/core/optimisers/adaptive/context_agents.py
golem/core/optimisers/adaptive/experience_buffer.py
golem/core/optimisers/adaptive/history_collector.py
golem/core/optimisers/adaptive/neural_mab.py
golem/core/optimisers/adaptive/operator_agent.py
golem/core/optimisers/adaptive/reward_agent.py
golem/core/optimisers/adaptive/mab_agents/__init__.py
golem/core/optimisers/adaptive/mab_agents/contextual_mab_agent.py
golem/core/optimisers/adaptive/mab_agents/mab_agent.py
golem/core/optimisers/adaptive/mab_agents/neural_contextual_mab_agent.py
golem/core/optimisers/archive/__init__.py
golem/core/optimisers/archive/generation_keeper.py
golem/core/optimisers/archive/individuals_containers.py
golem/core/optimisers/fitness/__init__.py
golem/core/optimisers/fitness/fitness.py
golem/core/optimisers/fitness/multi_objective_fitness.py
golem/core/optimisers/genetic/__init__.py
golem/core/optimisers/genetic/evaluation.py
golem/core/optimisers/genetic/gp_operators.py
golem/core/optimisers/genetic/gp_optimizer.py
golem/core/optimisers/genetic/gp_params.py
golem/core/optimisers/genetic/operators/__init__.py
golem/core/optimisers/genetic/operators/base_mutations.py
golem/core/optimisers/genetic/operators/crossover.py
golem/core/optimisers/genetic/operators/elitism.py
golem/core/optimisers/genetic/operators/inheritance.py
golem/core/optimisers/genetic/operators/mutation.py
golem/core/optimisers/genetic/operators/operator.py
golem/core/optimisers/genetic/operators/regularization.py
golem/core/optimisers/genetic/operators/reproduction.py
golem/core/optimisers/genetic/operators/selection.py
golem/core/optimisers/genetic/parameters/__init__.py
golem/core/optimisers/genetic/parameters/graph_depth.py
golem/core/optimisers/genetic/parameters/mutation_prob.py
golem/core/optimisers/genetic/parameters/operators_prob.py
golem/core/optimisers/genetic/parameters/parameter.py
golem/core/optimisers/genetic/parameters/population_size.py
golem/core/optimisers/meta/__init__.py
golem/core/optimisers/meta/surrogate_evaluator.py
golem/core/optimisers/meta/surrogate_model.py
golem/core/optimisers/meta/surrogate_optimizer.py
golem/core/optimisers/objective/__init__.py
golem/core/optimisers/objective/objective.py
golem/core/optimisers/objective/objective_eval.py
golem/core/optimisers/opt_history_objects/__init__.py
golem/core/optimisers/opt_history_objects/generation.py
golem/core/optimisers/opt_history_objects/individual.py
golem/core/optimisers/opt_history_objects/opt_history.py
golem/core/optimisers/opt_history_objects/parent_operator.py
golem/core/optimisers/random/__init__.py
golem/core/optimisers/random/random_mutation_optimizer.py
golem/core/optimisers/random/random_search.py
golem/core/tuning/__init__.py
golem/core/tuning/hyperopt_tuner.py
golem/core/tuning/iopt_tuner.py
golem/core/tuning/optuna_tuner.py
golem/core/tuning/search_space.py
golem/core/tuning/sequential.py
golem/core/tuning/simultaneous.py
golem/core/tuning/tuner_interface.py
golem/metrics/__init__.py
golem/metrics/edit_distance.py
golem/metrics/graph_features.py
golem/metrics/graph_metrics.py
golem/metrics/mmd.py
golem/serializers/__init__.py
golem/serializers/any_serialization.py
golem/serializers/serializer.py
golem/serializers/coders/__init__.py
golem/serializers/coders/enum_serialization.py
golem/serializers/coders/graph_node_serialization.py
golem/serializers/coders/graph_serialization.py
golem/serializers/coders/opt_history_serialization.py
golem/serializers/coders/parent_operator_serialization.py
golem/serializers/coders/uuid_serialization.py
golem/structural_analysis/__init__.py
golem/structural_analysis/base_sa_approaches.py
golem/structural_analysis/graph_sa/__init__.py
golem/structural_analysis/graph_sa/edge_sa_approaches.py
golem/structural_analysis/graph_sa/edges_analysis.py
golem/structural_analysis/graph_sa/graph_structural_analysis.py
golem/structural_analysis/graph_sa/node_sa_approaches.py
golem/structural_analysis/graph_sa/nodes_analysis.py
golem/structural_analysis/graph_sa/postproc_methods.py
golem/structural_analysis/graph_sa/sa_approaches_repository.py
golem/structural_analysis/graph_sa/sa_requirements.py
golem/structural_analysis/graph_sa/entities/__init__.py
golem/structural_analysis/graph_sa/entities/edge.py
golem/structural_analysis/graph_sa/results/__init__.py
golem/structural_analysis/graph_sa/results/base_sa_approach_result.py
golem/structural_analysis/graph_sa/results/deletion_sa_approach_result.py
golem/structural_analysis/graph_sa/results/object_sa_result.py
golem/structural_analysis/graph_sa/results/replace_sa_approach_result.py
golem/structural_analysis/graph_sa/results/sa_analysis_results.py
golem/structural_analysis/graph_sa/results/utils.py
golem/utilities/__init__.py
golem/utilities/data_structures.py
golem/utilities/grouped_condition.py
golem/utilities/memory.py
golem/utilities/random.py
golem/utilities/requirements_notificator.py
golem/utilities/sequence_iterator.py
golem/utilities/serializable.py
golem/utilities/singleton_meta.py
golem/utilities/utilities.py
golem/utilities/profiler/__init__.py
golem/utilities/profiler/memory_profiler.py
golem/utilities/profiler/time_profiler.py
golem/visualisation/__init__.py
golem/visualisation/graph_viz.py
golem/visualisation/opt_viz.py
golem/visualisation/opt_viz_extra.py
golem/visualisation/opt_history/__init__.py
golem/visualisation/opt_history/arg_constraint_wrapper.py
golem/visualisation/opt_history/diversity.py
golem/visualisation/opt_history/fitness_box.py
golem/visualisation/opt_history/fitness_line.py
golem/visualisation/opt_history/graphs_interactive.py
golem/visualisation/opt_history/history_visualization.py
golem/visualisation/opt_history/multiple_fitness_line.py
golem/visualisation/opt_history/operations_animated_bar.py
golem/visualisation/opt_history/operations_kde.py
golem/visualisation/opt_history/utils.py
libs/__init__.py
libs/netcomp/__init__.py
libs/netcomp/distance.py
libs/netcomp/eigenstuff.py
libs/netcomp/matrices.py
thegolem.egg-info/PKG-INFO
thegolem.egg-info/SOURCES.txt
thegolem.egg-info/dependency_links.txt
thegolem.egg-info/requires.txt
thegolem.egg-info/top_level.txt