Metadata-Version: 2.1
Name: symetrics
Version: 2.2.1
Summary: Symetrics API
Home-page: https://lbundalian.github.io/symetrics/
Author: Linnaeus Bundalian
Author-email: linnaeusbundalian@gmail.com
Keywords: python,synonymous variants
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Education
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows

A package to access SYMETRICS database. SYMETRICS database is a consolidation of metrics for synonymous variants which were derived from a number of computational tools each of which contributing to attribute specific metrics such as SYNVEP for general functional constraints, SpliceAI for splicing effect, SILVA for obtaining GERP++ (phylogenetic related constraints) CpG/CpG_Exon, dRSCU/RSCU for codon usage and SURF for rna stability. The package also includes a result of the analysis of the influence of each variants exceeding set threshold per metrics defined constituting to a score assigned to a gene
