Metadata-Version: 2.1
Name: strainscan
Version: 1.0.5
Summary: One efficient and accurate strain-level microbiome composition analysis tool based on reference genomes and k-mers.
Home-page: https://github.com/liaoherui/StrainScan
Author: Liao Herui and Ji Yongxin
Author-email: heruiliao2-c@my.cityu.edu.hk
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3.7
Requires-Python: ~=3.7
Description-Content-Type: text/markdown
Requires-Dist: numpy (==1.17.3)
Requires-Dist: pandas (==1.0.1)
Requires-Dist: biopython (==1.74)
Requires-Dist: scipy (==1.3.1)
Requires-Dist: scikit-learn (==0.23.1)
Requires-Dist: bidict (==0.21.3)
Requires-Dist: treelib (==1.6.1)

StrainScan takes reference database and sequencing data as input, outputs strain-level microbiome compistion analysis report.

