LICENSE
README.md
pyproject.toml
setup.py
scripts/__init__.py
scripts/bundler.py
scripts/convert_to_jinja.py
scripts/create_agent.py
scripts/generate_configs.py
scripts/generate_goals.py
scripts/generate_reflection_delta.py
scripts/helpsteer3.py
scripts/migrate_scores.py
scripts/prune_scores.py
scripts/score_unscored_hypotheses.py
scripts/summarize_pattern_stats.py
scripts/txt_to_j2.py
scripts/update_run_configs.py
scripts/zip_project.py
stephanie/__init__.py
stephanie/cli.py
stephanie/constants.py
stephanie/main.py
stephanie/supervisor.py
stephanie.egg-info/PKG-INFO
stephanie.egg-info/SOURCES.txt
stephanie.egg-info/dependency_links.txt
stephanie.egg-info/top_level.txt
stephanie/agents/__init__.py
stephanie/agents/auto_tuner.py
stephanie/agents/automind.py
stephanie/agents/base_agent.py
stephanie/agents/compiler_optimizer.py
stephanie/agents/cot_dspy_generator.py
stephanie/agents/cot_generator.py
stephanie/agents/debate.py
stephanie/agents/dots_planner.py
stephanie/agents/evolution.py
stephanie/agents/general_reasoner.py
stephanie/agents/generation.py
stephanie/agents/generic.py
stephanie/agents/idea_evaluator.py
stephanie/agents/idea_evolution.py
stephanie/agents/idea_innovation.py
stephanie/agents/idea_sharpening.py
stephanie/agents/judge.py
stephanie/agents/lats.py
stephanie/agents/lats_dspy.py
stephanie/agents/lats_original.py
stephanie/agents/lookahead.py
stephanie/agents/meta_review.py
stephanie/agents/method_planner.py
stephanie/agents/model_selector.py
stephanie/agents/mrq_scoring.py
stephanie/agents/mrq_strategy.py
stephanie/agents/pipeline.py
stephanie/agents/pipeline_comparison.py
stephanie/agents/pipeline_judge.py
stephanie/agents/pipeline_preference_trainer.py
stephanie/agents/planner.py
stephanie/agents/prompt_compiler.py
stephanie/agents/prompt_tuning.py
stephanie/agents/prompt_validation.py
stephanie/agents/proximity.py
stephanie/agents/ranking.py
stephanie/agents/recovery_parser.py
stephanie/agents/refiner.py
stephanie/agents/reflection.py
stephanie/agents/reflection_delta.py
stephanie/agents/review.py
stephanie/agents/rule_generator.py
stephanie/agents/rule_refiner.py
stephanie/agents/rule_tuner.py
stephanie/agents/score_analysis.py
stephanie/agents/self_aware_planner.py
stephanie/agents/self_rewarding.py
stephanie/agents/sharpening.py
stephanie/agents/symbolic_optimizer.py
stephanie/agents/symbolic_tuner.py
stephanie/agents/task_generator_agent.py
stephanie/agents/trainer.py
stephanie/agents/unified_mrq.py
stephanie/agents/ats/__init__.py
stephanie/agents/ats/agentic_tree_search.py
stephanie/agents/ats/code_executor.py
stephanie/agents/ats/output_verifier.py
stephanie/agents/ats/plan_generator.py
stephanie/agents/ats/solution_node.py
stephanie/agents/compiler/__init__.py
stephanie/agents/compiler/compiler.py
stephanie/agents/compiler/dspy_assembler.py
stephanie/agents/compiler/final_assembler.py
stephanie/agents/compiler/final_prompt_builder.py
stephanie/agents/compiler/node_executor.py
stephanie/agents/compiler/prompt_tuning.py
stephanie/agents/compiler/reasoning_trace.py
stephanie/agents/compiler/scorer.py
stephanie/agents/compiler/step_compiler.py
stephanie/agents/compiler/step_processor.py
stephanie/agents/compiler/step_selector.py
stephanie/agents/compiler/symbol_mapper.py
stephanie/agents/evolution_engine/__init__.py
stephanie/agents/evolution_engine/cartridge_merger.py
stephanie/agents/evolution_engine/cartridge_scorer.py
stephanie/agents/evolution_engine/evolution_selector.py
stephanie/agents/evolution_engine/instruction_variator.py
stephanie/agents/evolution_engine/orchestrator.py
stephanie/agents/evolution_engine/report_generator.py
stephanie/agents/evolution_engine/slave_system.py
stephanie/agents/knowledge/__init__.py
stephanie/agents/knowledge/adaptive_reasoner.py
stephanie/agents/knowledge/arxiv_search.py
stephanie/agents/knowledge/automind_knowledge_collector.py
stephanie/agents/knowledge/cartridge.py
stephanie/agents/knowledge/document_loader.py
stephanie/agents/knowledge/document_profiler.py
stephanie/agents/knowledge/document_reward_scorer.py
stephanie/agents/knowledge/document_trainer.py
stephanie/agents/knowledge/knowledge_loader.py
stephanie/agents/knowledge/literature.py
stephanie/agents/knowledge/paper_score.py
stephanie/agents/knowledge/paper_summarizer.py
stephanie/agents/knowledge/search_orchestrator.py
stephanie/agents/knowledge/survey.py
stephanie/agents/pipeline/__init__.py
stephanie/agents/pipeline/pipeline_mutation.py
stephanie/agents/pipeline/pipeline_runner.py
stephanie/analysis/__init__.py
stephanie/analysis/domain_classifier.py
stephanie/analysis/paper_score_evaluator.py
stephanie/analysis/reflection_delta.py
stephanie/analysis/rubric_classifier.py
stephanie/analysis/rubric_clusterer.py
stephanie/analysis/rule_analytics.py
stephanie/analysis/rule_effect_analyzer.py
stephanie/analysis/symbolic_impact_analyzer.py
stephanie/components/__init__.py
stephanie/components/agent_tree_search.py
stephanie/components/coding_strategy.py
stephanie/components/lats_component.py
stephanie/components/search_policy.py
stephanie/components/solution_tree.py
stephanie/dataloaders/__init__.py
stephanie/dataloaders/arm_to_mrq_dpo.py
stephanie/engine/__init__.py
stephanie/engine/cycle_watcher.py
stephanie/engine/meta_confidence.py
stephanie/engine/self_validation.py
stephanie/engine/state_tracker.py
stephanie/engine/training_controller.py
stephanie/envs/__init__.py
stephanie/envs/research_env.py
stephanie/evaluator/__init__.py
stephanie/evaluator/agreement_checker.py
stephanie/evaluator/arm_reassoning_self_evaluator.py
stephanie/evaluator/base.py
stephanie/evaluator/callibration.py
stephanie/evaluator/evaluator_loader.py
stephanie/evaluator/hypothesis_value_predictor.py
stephanie/evaluator/llm_judge_evaluator.py
stephanie/evaluator/mrq_self_evaluator.py
stephanie/evaluator/mrq_trainer.py
stephanie/evaluator/sae.py
stephanie/evaluator/text_encoder.py
stephanie/interface/__init__.py
stephanie/interface/cli.py
stephanie/logs/__init__.py
stephanie/logs/console_logger.py
stephanie/logs/icons.py
stephanie/logs/json_logger.py
stephanie/memory/__init__.py
stephanie/memory/base.py
stephanie/memory/context_store.py
stephanie/memory/document_domain_section_store.py
stephanie/memory/document_domain_store.py
stephanie/memory/document_section_store.py
stephanie/memory/document_store.py
stephanie/memory/embedding_store.py
stephanie/memory/evaluation_store.py
stephanie/memory/goal_store.py
stephanie/memory/hypothesis_store.py
stephanie/memory/idea_store.py
stephanie/memory/lookahead_store.py
stephanie/memory/memory_tool.py
stephanie/memory/method_plan_store.py
stephanie/memory/mrq_store.py
stephanie/memory/pattern_store.py
stephanie/memory/pipeline_run_store.py
stephanie/memory/prompt_program_store.py
stephanie/memory/prompt_store.py
stephanie/memory/reflection_delta_store.py
stephanie/memory/report_logger.py
stephanie/memory/rule_application_store.py
stephanie/memory/rule_effect_store.py
stephanie/memory/score_store.py
stephanie/memory/search_hit_store.py
stephanie/memory/search_result_store.py
stephanie/memory/sharpening_store.py
stephanie/memory/symbolic_rule_store.py
stephanie/models/__init__.py
stephanie/models/base.py
stephanie/models/comparison_preference.py
stephanie/models/context_state.py
stephanie/models/document.py
stephanie/models/document_domain.py
stephanie/models/document_evaluation.py
stephanie/models/document_score.py
stephanie/models/document_section.py
stephanie/models/document_section_domain.py
stephanie/models/evaluation.py
stephanie/models/evaluation_rule_link.py
stephanie/models/goal.py
stephanie/models/hypothesis.py
stephanie/models/hypothesis_document_section.py
stephanie/models/idea.py
stephanie/models/lookahead.py
stephanie/models/method_plan.py
stephanie/models/mrq_memory_entry.py
stephanie/models/mrq_preference_pair.py
stephanie/models/node_orm.py
stephanie/models/pattern_stat.py
stephanie/models/pipeline_run.py
stephanie/models/prompt.py
stephanie/models/reflection_delta.py
stephanie/models/rule_application.py
stephanie/models/score.py
stephanie/models/score_dimension.py
stephanie/models/search_hit.py
stephanie/models/search_result.py
stephanie/models/sharpening_prediction.py
stephanie/models/sharpening_result.py
stephanie/models/symbolic_rule.py
stephanie/models/unified_mrq.py
stephanie/parsers/__init__.py
stephanie/parsers/utils.py
stephanie/prompts/__init__.py
stephanie/prompts/prompt_loader.py
stephanie/prompts/prompt_renderer.py
stephanie/prompts/strategy_resolver.py
stephanie/registry/__init__.py
stephanie/registry/agent_registry.py
stephanie/registry/pipeline.py
stephanie/registry/registry.py
stephanie/reports/__init__.py
stephanie/reports/formatter.py
stephanie/reports/general_reason.py
stephanie/reports/report_generator.py
stephanie/rules/__init__.py
stephanie/rules/rule_options_config.py
stephanie/rules/rule_tuner.py
stephanie/rules/symbolic_node.py
stephanie/rules/symbolic_rule_applier.py
stephanie/scoring/__init__.py
stephanie/scoring/base_evaluator.py
stephanie/scoring/base_score.py
stephanie/scoring/base_scorer.py
stephanie/scoring/batch.py
stephanie/scoring/contrastive_dimensional_tuner.py
stephanie/scoring/document_mrq_scorer.py
stephanie/scoring/document_mrq_trainer.py
stephanie/scoring/document_pair_builder.py
stephanie/scoring/document_value_predictor.py
stephanie/scoring/llm_scorer.py
stephanie/scoring/meta_review_scorer.py
stephanie/scoring/mrq_scorer.py
stephanie/scoring/pairwise_data.py
stephanie/scoring/prompt_pair_builder.py
stephanie/scoring/proximity.py
stephanie/scoring/registry.py
stephanie/scoring/score_analyzer.py
stephanie/scoring/score_bundle.py
stephanie/scoring/score_display.py
stephanie/scoring/score_result.py
stephanie/scoring/scoring_manager.py
stephanie/scoring/structured_engine.py
stephanie/scoring/svm_scorer.py
stephanie/scoring/calculations/__init__.py
stephanie/scoring/calculations/base_calculator.py
stephanie/scoring/calculations/mrq_normalizer.py
stephanie/scoring/calculations/score_delta.py
stephanie/scoring/calculations/weighted_average.py
stephanie/scoring/training/__init__.py
stephanie/scoring/training/base_trainer.py
stephanie/scoring/training/document_trainer.py
stephanie/scoring/training/hypothesis_trainer.py
stephanie/tools/__init__.py
stephanie/tools/arxiv_tool.py
stephanie/tools/cos_sim_tool.py
stephanie/tools/ddgs_web_search.py
stephanie/tools/embedding_tool.py
stephanie/tools/huggingface_tool.py
stephanie/tools/pdf_tools.py
stephanie/tools/view_ranking_trace.py
stephanie/tools/web_search.py
stephanie/tools/wikipedia_tool.py
stephanie/utils/__init__.py
stephanie/utils/document_section_parser.py
stephanie/utils/file_utils.py
stephanie/utils/goal_classifier.py
stephanie/utils/graph_tools.py
stephanie/utils/hashing.py
stephanie/utils/high_score_selector.py
stephanie/utils/loaders.py
stephanie/utils/lru_cache.py
stephanie/utils/query_generator.py
stephanie/utils/resource_extractor.py
stephanie/utils/run_utils.py
stephanie/utils/similarity_utils.py
stephanie/utils/timing.py
tests/test_generation.py
tests/test_ranking.py
tests/test_reflection.py