# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
absl-py>=2.0.0
aiobotocore>=2.5.4
aiohttp>=3.8.5
aioitertools>=0.11.0
aiosignal>=1.3.1
anndata>=0.9.2
annotated-types>=0.5.0
anyio>=3.7.1
arrow>=1.2.3
asciitree>=0.3.3
astunparse>=1.6.3
async-timeout>=4.0.3
attrs>=23.1.0
axial-positional-embedding>=0.2.1
backoff>=2.2.1
beautifulsoup4>=4.12.2
biomart>=0.9.2
blessed>=1.20.0
botocore>=1.31.17
cell2location>=0.1.3
chex>=0.1.7
click>=8.1.7
click-plugins>=1.1.1
cligj>=0.7.2
cloudpickle>=2.2.1
colorcet>=3.0.1
contextlib2>=21.6.0
cramjam>=2.8.3
croniter>=1.4.1
cryptography>=41.0.7
csbdeep>=0.8.0
dask>=2023.9.2
dask-image>=2023.8.1
datashader>=0.15.2
datashape>=0.5.2
dateutils>=0.6.12
deepdiff>=6.5.0
distributed>=2023.9.2
dm-tree>=0.1.8
docrep>=0.3.2
docutils>=0.20.1
einops>=0.6.1
entrypoints>=0.4
etils>=1.5.0
exceptiongroup>=1.1.3
fastapi>=0.103.2
fasteners>=0.19
fastparquet>=2024.2.0
filelock>=3.12.4
fiona>=1.9.4.post1
flatbuffers>=24.3.25
flax>=0.7.4
frozenlist>=1.4.0
gast>=0.6.0
geopandas>=0.14.0
google-pasta>=0.2.0
grpcio>=1.64.1
h11>=0.14.0
h5py>=3.9.0
histolab>=0.6.0
huggingface-hub>=0.17.3
igraph>=0.10.8
imagecodecs>=2024.6.1
imageio>=2.31.4
importlib-metadata>=6.8.0
importlib-resources>=6.1.0
inflect>=7.0.0
inquirer>=3.1.3
itsdangerous>=2.1.2
jaraco-classes>=3.3.0
jax>=0.4.16
jaxlib>=0.4.16
jeepney>=0.8.0
jmespath>=1.0.1
keras>=3.4.1
keyring>=24.3.0
lazy-loader>=0.3
leidenalg>=0.10.1
libclang>=18.1.1
lightning>=2.0.9.post0
lightning-cloud>=0.5.39
lightning-utilities>=0.9.0
lit>=18.1.8
littleutils>=0.2.2
llvmlite>=0.41.0
local-attention>=1.8.6
locket>=1.0.0
markdown>=3.6
markdown-it-py>=3.0.0
matplotlib-scalebar>=0.8.1
mdurl>=0.1.2
memory-profiler>=0.61.0
metric-learn>=0.7.0
ml-collections>=0.1.1
ml-dtypes>=0.3.1
more-itertools>=10.1.0
mpmath>=1.3.0
msgpack>=1.0.7
mudata>=0.2.3
multidict>=6.0.4
multipledispatch>=1.0.0
multiscale-spatial-image>=0.11.2
namex>=0.0.8
natsort>=8.4.0
nest-asyncio>=1.5.8
nh3>=0.2.15
numba>=0.58.0
numcodecs>=0.11.0
numpy>=1.26.4
numpyro>=0.13.2
nvidia-cublas-cu12>=12.1.3.1
nvidia-cuda-cupti-cu12>=12.1.105
nvidia-cuda-nvrtc-cu12>=12.1.105
nvidia-cuda-runtime-cu12>=12.1.105
nvidia-cudnn-cu12>=8.9.2.26
nvidia-cufft-cu12>=11.0.2.54
nvidia-curand-cu11>=10.2.10.91
nvidia-curand-cu12>=10.3.2.106
nvidia-cusolver-cu12>=11.4.5.107
nvidia-cusparse-cu11>=11.7.4.91
nvidia-cusparse-cu12>=12.1.0.106
nvidia-nccl-cu11>=2.14.3
nvidia-nccl-cu12>=2.20.5
nvidia-nvjitlink-cu12>=12.4.127
nvidia-nvtx-cu11>=11.7.91
nvidia-nvtx-cu12>=12.1.105
ogb>=1.3.6
ome-zarr>=0.8.1
omnipath>=1.0.7
opencv-python>=4.8.1.78
openslide-python>=1.2.0
opt-einsum>=3.3.0
optax>=0.1.7
optree>=0.11.0
orbax-checkpoint>=0.4.1
ordered-set>=4.1.0
outdated>=0.2.2
param>=1.13.0
partd>=1.4.1
patsy>=0.5.3
performer-pytorch>=1.1.4
pims>=0.6.1
pip>=24.0
pkginfo>=1.9.6
pluggy>=1.5.0
protobuf>=4.24.3
pyarrow>=13.0.0
pyct>=0.5.0
pydantic>=1.10.13
pydantic-core>=2.4.0
pygeos>=0.14
pygments>=2.16.1
pyjwt>=2.8.0
pynndescent>=0.5.10
pyproj>=3.6.1
pyro-api>=0.1.2
pyro-ppl>=1.8.6
python-editor>=1.0.4
python-multipart>=0.0.6
pytorch-lightning>=2.0.9.post0
pywavelets>=1.4.1
readchar>=4.0.5
readme-renderer>=42.0
regex>=2023.8.8
requests-toolbelt>=1.0.0
rfc3986>=2.0.0
rich>=13.5.3
s3fs>=2023.6.0
safetensors>=0.3.3
scanpy>=1.9.5
scikit-image>=0.19.3
scikit-misc>=0.3.0
scipy>=1.8.1
scprep>=1.2.3
scvi-tools>=1.0.3
seaborn>=0.12.2
secretstorage>=3.3.3
segment-anything>=1.0
session-info>=1.0.0
shapely>=2.0.1
slicerator>=1.1.0
sniffio>=1.3.0
sortedcontainers>=2.4.0
soupsieve>=2.5
sparse>=0.14.0
sparsemax>=0.1.9
spatial-image>=0.3.0
spatialdata>=0.0.12
squidpy>=1.3.0
stardist>=0.9.1
starlette>=0.27.0
starsessions>=1.3.0
statsmodels>=0.14.0
stdlib-list>=0.9.0
sympy>=1.12
tbb>=2021.10.0
tblib>=2.0.0
tensorboard>=2.16.2
tensorboard-data-server>=0.7.2
tensorflow-io-gcs-filesystem>=0.37.1
tensorstore>=0.1.44
termcolor>=2.4.0
texttable>=1.6.7
tifffile>=2023.9.26
timm>=0.9.8
tokenizers>=0.13.3
tomli>=2.0.1
toolz>=0.12.0
torch==2.1.0+cu118
torch-cluster==1.6.3+pt21cu118
torch-geometric>=2.5.3
torch-scatter==2.1.2+pt21cu118
torch-sparse==0.6.18+pt21cu118
torch-spline-conv==1.2.2+pt21cu118
torchaudio==2.1.0+cu118
torchmetrics>=1.2.0
torchvision==0.16.0+cu118
traitlets>=5.10.1
transformers>=4.33.3
triton>=2.1.0
twine>=4.0.2
typing-extensions>=4.11.0
umap-learn>=0.5.4
urllib3>=1.26.16
uvicorn>=0.23.2
validators>=0.22.0
wcwidth>=0.2.7
websocket-client>=1.6.3
websockets>=11.0.3
werkzeug>=3.0.3
wrapt>=1.15.0
xarray>=2022.12.0
xarray-dataclasses>=1.6.0
xarray-datatree>=0.0.12
xarray-schema>=0.0.3
xarray-spatial>=0.3.7
yarl>=1.9.2
zarr>=2.16.1
zict>=3.0.0
zipp>=3.17.0
