#Gene_ID	Gene_name	Codon_pos	Ref_nuc	Ref_codon	Res_codon	Resistance	PMID	Mechanism	Notes	Required_mut
#rrs	rrs	514	A	A	C	AMIKACIN	23561273;22479378
#rrs	rrs	517	C	C	T	AMIKACIN,STREPTOMYCIN	23561273;23995137;23906937;19209951
rrs	rrs	517	C	C	T	STREPTOMYCIN	23561273;23995137;23906937;19209951
rrs	rrs	1158	G	G	T	AMIKACIN	22479378
rrs	rrs	1338	A	A	C	AMIKACIN	22479378
#rrs	rrs	1401	A	A	G	AMIKACIN,CAPREOMYCIN,KANAMYCIN,STREPTOMYCIN	23561273;23995137;23288402;23705640;22461677;22479378;23166667;19209951;23906937
rrs	rrs	1401	A	A	G	AMIKACIN,CAPREOMYCIN,KANAMYCIN	23561273;23995137;23288402;23705640;22461677;22479378;23166667;19209951;23906937
rrs	rrs	1402	C	C	A,T	AMIKACIN,CAPREOMYCIN,KANAMYCIN	23705640;19209951,23288402;23705640;22479378;19209951
rrs	rrs	1484	G	G	T	AMIKACIN,CAPREOMYCIN,KANAMYCIN,STREPTOMYCIN	22479378;23166667;19209951;23906937
Rv0678	Rv0678	138	GAG	E	G	BEDAQUILINE,CLOFAZIMINE	25010492
Rv0678	Rv0678	94	CGG	R	Q	BEDAQUILINE,CLOFAZIMINE	25010492
Rv0678	Rv0678	68	AGC	S	G	BEDAQUILINE,CLOFAZIMINE	25010492
Rv0678	Rv0678	63	AGC	S	R	BEDAQUILINE,CLOFAZIMINE	24590481
Rv0678	Rv0678	134	CGA	R	*	BEDAQUILINE,CLOFAZIMINE	24590481
tlyA	tlyA	3	CGA	R	*	CAPREOMYCIN	19209951
tlyA	tlyA	14	CGG	R	W	CAPREOMYCIN	19209951
tlyA	tlyA	18	CGA	R	*	CAPREOMYCIN	19209951
tlyA	tlyA	22	CAG	Q	*	CAPREOMYCIN	19209951
tlyA	tlyA	67	GCG	A	E	CAPREOMYCIN	19209951
tlyA	tlyA	69	AAA	K	E	CAPREOMYCIN	19209951
tlyA	tlyA	91	GCA	A	E	CAPREOMYCIN	19209951
tlyA	tlyA	118	CTG	L	P	CAPREOMYCIN	19209951
tlyA	tlyA	128	GTG	V	E	CAPREOMYCIN	19209951
tlyA	tlyA	150	CTG	L	P	CAPREOMYCIN	19209951
tlyA	tlyA	183	CCG	P	L	CAPREOMYCIN	19209951
tlyA	tlyA	184	CAG	Q	*	CAPREOMYCIN	19209951
tlyA	tlyA	185	TTT	F	L	CAPREOMYCIN	19209951
tlyA	tlyA	236	AAT	N	K	CAPREOMYCIN	19209951
tlyA	tlyA	238	GAG	E	K	CAPREOMYCIN	19209951
embA_promoter_size_115bp	embA	4	GAC	D	N	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA	321	GGC	G	S	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA	350	GGC	G	D	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA	462	GCG	A	V	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA	833	GAC	D	A	ETHAMBUTOL	19209951
embB	embB	221	GCG	A	G	ETHAMBUTOL	19209951
embB	embB	225	GCG	A	S	ETHAMBUTOL	19209951
embB	embB	227	GTG	V	G	ETHAMBUTOL	19209951
embB	embB	239	CTG	L	P	ETHAMBUTOL	19209951
embB	embB	240	GAC	D	H	ETHAMBUTOL	19209951
embB	embB	257	CGG	R	W	ETHAMBUTOL	19209951
embB	embB	271	GCA	A	V	ETHAMBUTOL	19209951
embB	embB	272	AGC	S	C,I	ETHAMBUTOL	19209951,19209951
embB	embB	274	CGC	R	P	ETHAMBUTOL	19209951
embB	embB	281	GCC	A	P	ETHAMBUTOL	19209951
embB	embB	282	GTG	V	L,G	ETHAMBUTOL	19209951,19209951
embB	embB	285	TTC	F	L	ETHAMBUTOL	19209951
embB	embB	287	TTC	F	V,C	ETHAMBUTOL	19209951,19209951
embB	embB	293	ATC	I	N	ETHAMBUTOL	19209951
embB	embB	294	GGC	G	S	ETHAMBUTOL	19209951
embB	embB	296	AAT	N	H,K	ETHAMBUTOL	19209951,19209951
embB	embB	297	TCG	S	A,L	ETHAMBUTOL	19209951,19209951
embB	embB	298	TCG	S	W	ETHAMBUTOL	23561273
embB	embB	299	GAC	D	E	ETHAMBUTOL	19209951
embB	embB	306	ATG	M	L,V,T,I	ETHAMBUTOL	23995136;24055765;22461677;19209951,23995137;23995136;22461677;23166667;19209951,19209951,23995137;23995136;24055765;22461677;23166667;19209951
embB	embB	309	GTC	V	G	ETHAMBUTOL	19209951
embB	embB	311	GAC	D	H,G	ETHAMBUTOL	19209951,23561273
embB	embB	312	CAC	H	R	ETHAMBUTOL	19209951
embB	embB	313	GCC	A	V	ETHAMBUTOL	23995137;22461677
embB	embB	314	GGC	G	A	ETHAMBUTOL	19209951
embB	embB	315	TAC	Y	C	ETHAMBUTOL	22461677
embB	embB	317	TCC	S	T	ETHAMBUTOL	19209951
embB	embB	318	AAC	N	H,S,K	ETHAMBUTOL	19209951,19209951,19209951
embB	embB	319	TAT	Y	N,S,C	ETHAMBUTOL	19209951,19209951,23561273;19209951
embB	embB	320	TTC	F	L	ETHAMBUTOL	23561273
embB	embB	328	GAT	D	Y,V,G	ETHAMBUTOL	19209951,23561273;19209951,23561273;19209951
embB	embB	330	TTC	F	V	ETHAMBUTOL	19209951
embB	embB	331	GGC	G	R	ETHAMBUTOL	19209951
embB	embB	332	TGG	W	L	ETHAMBUTOL	19209951
embB	embB	333	TAT	Y	H	ETHAMBUTOL	19209951
embB	embB	334	TAC	Y	H	ETHAMBUTOL	19209951
embB	embB	347	AGT	S	C,I,T	ETHAMBUTOL	23561273,19209951,19209951
embB	embB	354	GAC	D	A	ETHAMBUTOL	23561273;23995137;23995136
embB	embB	356	GCC	A	S,V	ETHAMBUTOL	19209951,19209951
embB	embB	357	GCC	A	S,V	ETHAMBUTOL	19209951,19209951
embB	embB	358	GGG	G	V	ETHAMBUTOL	19209951
embB	embB	359	CTA	L	I	ETHAMBUTOL	19209951
embB	embB	360	GTG	V	M	ETHAMBUTOL	19209951
embB	embB	366	TCG	S	P	ETHAMBUTOL	19209951
embB	embB	367	CGT	R	P	ETHAMBUTOL	19209951
embB	embB	368	GAG	E	Q,A,D	ETHAMBUTOL	19209951,19209951,19209951
embB	embB	369	GTG	V	L,A	ETHAMBUTOL	19209951,19209951
embB	embB	370	CTG	L	R	ETHAMBUTOL	19209951
embB	embB	371	CCC	P	R	ETHAMBUTOL	19209951
embB	embB	374	GGG	G	V	ETHAMBUTOL	19209951
embB	embB	375	CCG	P	A	ETHAMBUTOL	19209951
embB	embB	377	GTG	V	M,G	ETHAMBUTOL	19209951,19209951
#embB	embB	378	GAG	E	K,A	ETHAMBUTOL	19209951,23995136;19209951
embB	embB	378	GAG	E	K	ETHAMBUTOL	19209951
embB	embB	379	GCC	A	T,D	ETHAMBUTOL	19209951,19209951
embB	embB	380	AGC	S	R,N	ETHAMBUTOL	19209951,23561273
embB	embB	384	TAC	Y	N	ETHAMBUTOL	19209951
embB	embB	388	GCC	A	G	ETHAMBUTOL	19209951
embB	embB	395	TGG	W	R,C	ETHAMBUTOL	19209951,19209951
embB	embB	397	CCG	P	T,Q	ETHAMBUTOL	19209951,19209951
embB	embB	398	TTC	F	Y	ETHAMBUTOL	19209951
embB	embB	399	AAC	N	H,D	ETHAMBUTOL	19209951,19209951
embB	embB	400	AAC	N	K	ETHAMBUTOL	19209951
embB	embB	401	GGC	G	S	ETHAMBUTOL	19209951
embB	embB	404	CCG	P	S	ETHAMBUTOL	23561273
embB	embB	405	GAG	E	D	ETHAMBUTOL	23561273
embB	embB	406	GGC	G	S,C,D,A	ETHAMBUTOL	23561273;23995136;24055765;19209951,23995136;24055765;19209951,23561273;23995136;24055765;19209951,23561273;24055765;19209951
embB	embB	412	TCG	S	L	ETHAMBUTOL	23561273
embB	embB	423	ATG	M	I	ETHAMBUTOL	19209951
embB	embB	430	CCG	P	L	ETHAMBUTOL	19209951
embB	embB	431	GCG	A	T	ETHAMBUTOL	19209951
embB	embB	435	GTC	V	G	ETHAMBUTOL	19209951
embB	embB	436	GTT	V	G	ETHAMBUTOL	19209951
embB	embB	437	ACC	T	A	ETHAMBUTOL	19209951
embB	embB	446	CCC	P	H	ETHAMBUTOL	19209951
embB	embB	448	GGC	G	V	ETHAMBUTOL	19209951
embB	embB	452	GTG	V	L	ETHAMBUTOL	19209951
embB	embB	459	GGC	G	A	ETHAMBUTOL	19209951
embB	embB	460	CGC	R	C,L	ETHAMBUTOL	19209951,19209951
embB	embB	461	CCG	P	S	ETHAMBUTOL	19209951
embB	embB	469	CGT	R	P	ETHAMBUTOL	19209951
embB	embB	471	CGC	R	P	ETHAMBUTOL	19209951
embB	embB	482	ATG	M	I	ETHAMBUTOL	23561273
embB	embB	497	CAG	Q	K,P,R	ETHAMBUTOL	23561273;19209951,23561273,23561273;23995137;23995136;24055765;19209951
embB	embB	504	GAA	E	D	ETHAMBUTOL	23561273;23995137
embB	embB	507	AGG	R	K	ETHAMBUTOL	23561273
embB	embB	659	GCG	A	T	ETHAMBUTOL	19209951
embB	embB	745	GGC	G	D	ETHAMBUTOL	19209951
embB	embB	853	CAG	Q	P	ETHAMBUTOL	23995136
embB	embB	959	GAC	D	A	ETHAMBUTOL	19209951
embB	embB	1000	ATG	M	R	ETHAMBUTOL	19209951
embB	embB	1002	CAC	H	R	ETHAMBUTOL	23995137
embB	embB	1024	GAC	D	N	ETHAMBUTOL	19209951
#embB	embB	1082	ACC	T	A	ETHAMBUTOL	23995136
embC	embC	187	GAG	E	E	ETHAMBUTOL	23995136
embC	embC	244	GCC	A	T	ETHAMBUTOL	19209951
embC	embC	247	GCG	A	P	ETHAMBUTOL	19209951
embC	embC	251	CTG	L	R	ETHAMBUTOL	19209951
embC	embC	254	GCC	A	G	ETHAMBUTOL	19209951
#embC	embC	270	ACC	T	I	ETHAMBUTOL	23995136;24055765;19209951
embC	embC	272	GGT	G	S	ETHAMBUTOL	19209951
embC	embC	285	CAT	H	Y	ETHAMBUTOL	19209951
embC	embC	287	GTC	V	F	ETHAMBUTOL	19209951
embC	embC	288	GGG	G	W,V	ETHAMBUTOL	19209951,19209951
embC	embC	296	TAC	Y	H,S	ETHAMBUTOL	19209951,19209951
embC	embC	297	ATC	I	L,T	ETHAMBUTOL	19209951,19209951
embC	embC	300	ATG	M	R	ETHAMBUTOL	19209951
embC	embC	302	CGG	R	G	ETHAMBUTOL	19209951
embC	embC	303	GTG	V	G	ETHAMBUTOL	19209951
embC	embC	307	GCG	A	T	ETHAMBUTOL	19209951
embC	embC	308	GGC	G	D	ETHAMBUTOL	19209951
embC	embC	309	TAT	Y	N	ETHAMBUTOL	19209951
embC	embC	310	ATG	M	K	ETHAMBUTOL	19209951
embC	embC	325	GGC	G	S	ETHAMBUTOL	19209951
embC	embC	326	TGG	W	R	ETHAMBUTOL	19209951
embC	embC	327	TAC	Y	N	ETHAMBUTOL	19209951
embC	embC	779	GCC	A	V	ETHAMBUTOL	23995136
embR	embR	379	CAG	Q	R	ETHAMBUTOL	19209951
embR	embR	369	ATT	I	T	ETHAMBUTOL	19209951
embR	embR	356	CGA	R	G	ETHAMBUTOL	19209951
embR	embR	350	GTG	V	G	ETHAMBUTOL	19209951
embR	embR	326	AGC	S	N	ETHAMBUTOL	19209951
embR	embR	320	CTA	L	V	ETHAMBUTOL	19209951
embR	embR	292	CTG	L	M	ETHAMBUTOL	19209951
embR	embR	240	GGC	G	R	ETHAMBUTOL	19209951
embR	embR	230	CGG	R	W	ETHAMBUTOL	19209951
embR	embR	223	GAT	D	E	ETHAMBUTOL	19209951
embR	embR	211	CTG	L	M	ETHAMBUTOL	19209951
embR	embR	200	GAA	E	A	ETHAMBUTOL	19209951
embR	embR	188	AGC	S	R	ETHAMBUTOL	19209951
embR	embR	187	GCC	A	V	ETHAMBUTOL	19209951
embR	embR	186	CGG	R	G	ETHAMBUTOL	19209951
embR	embR	176	GCC	A	V	ETHAMBUTOL	19209951
embR	embR	172	CTT	L	R	ETHAMBUTOL	19209951
embR	embR	53	GAC	D	H	ETHAMBUTOL	19209951
embR	embR	32	ACC	T	P	ETHAMBUTOL	19209951
embR	embR	7	GTG	V	G	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA_promoter	-16	C	C	T	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA_promoter	-12	C	C	T	ETHAMBUTOL	19209951
embA_promoter_size_115bp	embA_promoter	-11	C	C	A	ETHAMBUTOL	19209951
ethA_promoter_size_74bp	ethA	463	CGT	R	S	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	461	TAC	Y	H	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	413	GGT	G	D	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	403	TGT	C	G	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	397	CTG	L	R	ETHIONAMIDE	19486070
ethA_promoter_size_74bp	ethA	392	ACG	T	A	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	386	TAC	Y	C	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	385	GGC	G	D	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	381	GCC	A	P	ETHIONAMIDE	10944230;19209951
ethA_promoter_size_74bp	ethA	342	ACG	T	K	ETHIONAMIDE	10944230;19209951
ethA_promoter_size_74bp	ethA	338	ATC	I	S	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	333	CTG	L	R	ETHIONAMIDE	19486070
ethA_promoter_size_74bp	ethA	329	TCA	S	L	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	272	CTA	L	P	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	269	CAG	Q	*	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	246	CAG	Q	*	ETHIONAMIDE	14638486;19209951
ethA_promoter_size_74bp	ethA	232	ACC	T	A	ETHIONAMIDE	19486070
ethA_promoter_size_74bp	ethA	223	GAG	E	K	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	186	ACG	T	K	ETHIONAMIDE	10944230;19209951
ethA_promoter_size_74bp	ethA	165	CAG	Q	P	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	84	TAC	Y	D	ETHIONAMIDE	10944230;19209951
ethA_promoter_size_74bp	ethA	61	ACG	T	M	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	58	GAC	D	A	ETHIONAMIDE	10944230;19209951
ethA_promoter_size_74bp	ethA	51	CCC	P	L	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	43	GGC	G	C,S	ETHIONAMIDE	19209951,10944230;14638486;19209951
ethA_promoter_size_74bp	ethA	22	CAC	H	P	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	11	GGC	G	A	ETHIONAMIDE	20974869
ethA_promoter_size_74bp	ethA	1	ATG	M	R	ETHIONAMIDE	20974869
ethR	ethR	95	GCC	A	T	ETHIONAMIDE	20974869
ethR	ethR	110	TTC	F	L	ETHIONAMIDE	20974869
inhA	inhA	21	ATC	I	T	ETHIONAMIDE	10944230
inhA	inhA	94	TCG	S	A	ETHIONAMIDE	20974869;19209951
fabG1_promoter_size_223bp	fabG1_promoter	-17	G	G	T	ETHIONAMIDE,ISONIAZID	19209951;23561273;22461677
fabG1_promoter_size_223bp	fabG1_promoter	-15	C	C	T	ETHIONAMIDE,ISONIAZID	10944230;19209951;23561273;19486070;Wang_et_al._2013;10884617;22461677;Jin_et_al._2012
fabG1_promoter_size_223bp	fabG1_promoter	-8	T	T	C	ETHIONAMIDE	20974869
gyrA	gyrA	68	CGC	R	G	FLUOROQUINOLONE	23561273
gyrA	gyrA	69	AGC	S	T	FLUOROQUINOLONE	23561273
gyrA	gyrA	70	CAC	H	R	FLUOROQUINOLONE	23705640;22279180
gyrA	gyrA	74	GCC	A	S	FLUOROQUINOLONE	24055765;23705640;22279180;19209951
#gyrA	gyrA	80	ACC	T	A	FLUOROQUINOLONE	23705640;22279180;19209951
gyrA	gyrA	88	GGC	G	C,A	FLUOROQUINOLONE	24055765;23705640;22279180,24055765;23705640;22279180;19209951
gyrA	gyrA	89	GAC	D	N	FLUOROQUINOLONE	23561273;22461677;22279180;19209951
gyrA	gyrA	90	GCG	A	E,V,G	FLUOROQUINOLONE	22279180,23561273;23995137;24055765;23288402;23906937;23705640;22461677;22279180;23166667;19209951,23705640;22279180;19209951
gyrA	gyrA	91	TCG	S	P,A	FLUOROQUINOLONE	23561273;23288402;23906937;23705640;22461677;22279180;23166667;19209951,23561273;22279180
gyrA	gyrA	92	ATC	I	M	FLUOROQUINOLONE	22279180
gyrA	gyrA	94	GAC	D	N,Y,H,V,A,G	FLUOROQUINOLONE	23561273;23995137;23288402;23906937;23705640;22461677;22279180;23166667;19209951,23561273;23288402;23705640;22461677;22279180;23166667;19209951,23561273;24055765;23288402;23906937;23705640;22461677;22279180;23166667;19209951,24055765;23705640;22279180;19209951,23288402;23705640;22461677;22279180;23166667;19209951,23561273;24055765;23288402;23906937;23705640;22461677;22279180;23166667;19209951
gyrA	gyrA	102	CCC	P	H	FLUOROQUINOLONE	23705640;22279180;19209951
gyrA	gyrA	109	CTG	L	V	FLUOROQUINOLONE	22279180;19209951
gyrB	gyrB	90	GCC	A	G	FLUOROQUINOLONE	23995137
gyrB	gyrB	446	CGT	R	C,H,L	FLUOROQUINOLONE	23995137;19209951,23705640,23705640
gyrB	gyrB	447	TCC	S	F	FLUOROQUINOLONE	23705640;22279180;19209951
gyrB	gyrB	461	GAC	D	N,H,A	FLUOROQUINOLONE	24055765;23705640;22279180;19209951,24055765;23705640;22279180;19209951,24055765;23705640;22279180;19209951
gyrB	gyrB	470	GGT	G	C,A	FLUOROQUINOLONE	23705640,23705640;22279180;19209951
gyrB	gyrB	486	ATC	I	L	FLUOROQUINOLONE	23705640
gyrB	gyrB	494	GAC	D	A	FLUOROQUINOLONE	23705640;19209951
gyrB	gyrB	499	AAC	N	Y,D,T,K	FLUOROQUINOLONE	23705640,24055765;23705640;19209951,24055765;23705640;22279180;19209951,24055765;23705640
gyrB	gyrB	500	ACC	T	P,N,I	FLUOROQUINOLONE	24055765;23705640;22279180;19209951,24055765;23705640,23705640
gyrB	gyrB	501	GAA	E	V,D	FLUOROQUINOLONE	24055765;23705640;22279180;19209951,24055765;23705640;22279180
gyrB	gyrB	504	GCG	A	T,V	FLUOROQUINOLONE	23705640;22279180;19209951,24055765;23705640;19209951
gyrB	gyrB	507	ACG	T	M	FLUOROQUINOLONE	24055765
gyrB	gyrB	538	CAA	Q	H	FLUOROQUINOLONE	22279180;19209951
gyrB	gyrB	670	GTT	V	F	FLUOROQUINOLONE	23995137
ahpC_promoter_size_180bp	ahpC	2	CCA	P	S	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	5	ACC	T	I	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	10	TTC	F	I	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	33	GAC	D	N	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	73	GAC	D	H	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	76	GAG	E	K	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC	191	CTC	L	R	ISONIAZID	19209951
inhA	inhA	8	AAA	K	N	ISONIAZID	19209951
inhA	inhA	11	CTG	L	V	ISONIAZID	19486070
inhA	inhA	16	ATC	I	T	ISONIAZID	10884617;19209951
inhA	inhA	21	ATC	I	V,N,T	ISONIAZID	19486070;10884617;19209951,19486070,19209951
inhA	inhA	40	GGG	G	W	ISONIAZID	19486070
inhA	inhA	47	ATT	I	T	ISONIAZID	10884617;19209951
#inhA	inhA	78	GTG	V	A	ISONIAZID	19209951
inhA	inhA	94	TCG	S	A,L,W	ISONIAZID	19486070;23995137;24055765;10884617;19209951,19209951,19486070
inhA	inhA	95	ATT	I	P,T	ISONIAZID	24731071,19209951
inhA	inhA	194	ATC	I	T	ISONIAZID	19209951
kasA	kasA	66	GAT	D	N	ISONIAZID	10884617;19209951
kasA	kasA	77	ATG	M	I	ISONIAZID	19209951
kasA	kasA	121	AGG	R	K	ISONIAZID	10884617;19209951
#kasA	kasA	269	GGT	G	S	ISONIAZID	10884617;19209951
#kasA	kasA	312	GGC	G	S	ISONIAZID	10884617;19209951
kasA	kasA	387	GGC	G	D	ISONIAZID	10884617;19209951
kasA	kasA	413	TTC	F	L	ISONIAZID	10884617;19209951
katG_promoter_size_107bp	katG	735	GAC	D	A,N	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	728	TGG	W	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	727	GCC	A	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	717	CAG	Q	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	716	GCG	A	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	713	GCC	A	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	710	GTC	V	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	700	TCC	S	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	695	GAC	D	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	685	GGC	G	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	653	CTG	L	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	636	GCA	A	E	ISONIAZID	19209951
katG_promoter_size_107bp	katG	634	CTC	L	F	ISONIAZID	19209951
katG_promoter_size_107bp	katG	629	GGT	G	S	ISONIAZID	10884617;19209951
katG_promoter_size_107bp	katG	619	CTC	L	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	609	ATG	M	I	ISONIAZID	19209951
katG_promoter_size_107bp	katG	607	GAG	E	K	ISONIAZID	19209951
katG_promoter_size_107bp	katG	593	GGC	G	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	589	CCC	P	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	587	CTG	L	P,M	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	574	GCG	A	V,E	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	573	GAT	D	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	567	TTC	F	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	551	GCC	A	G	ISONIAZID	19209951
katG_promoter_size_107bp	katG	550	GCC	A	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	529	AAC	N	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	525	CAG	Q	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	515	CGC	R	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	505	TGG	W	S,R	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	502	CAA	Q	H	ISONIAZID	19209951
katG_promoter_size_107bp	katG	496	CGC	R	L	ISONIAZID	23561273
katG_promoter_size_107bp	katG	491	GGC	G	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	488	AAG	K	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	485	GGT	G	V	ISONIAZID	23561273;19209951
katG_promoter_size_107bp	katG	484	CGT	R	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	477	TGG	W	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	473	GTT	V	F	ISONIAZID	23561273
katG_promoter_size_107bp	katG	464	GCA	A	S	ISONIAZID	23561273
katG_promoter_size_107bp	katG	463	CGG	R	W	ISONIAZID	23561273
katG_promoter_size_107bp	katG	462	ATC	I	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	461	CAG	Q	P	ISONIAZID	23561273
katG_promoter_size_107bp	katG	459	AAG	K	*	ISONIAZID	23561273
katG_promoter_size_107bp	katG	457	AGC	S	I	ISONIAZID	19209951
katG_promoter_size_107bp	katG	454	GAG	E	R	ISONIAZID	24731071
katG_promoter_size_107bp	katG	449	CTC	L	F	ISONIAZID	19209951
katG_promoter_size_107bp	katG	444	GCG	A	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	435	ACC	T	I	ISONIAZID	23561273
katG_promoter_size_107bp	katG	434	CAG	Q	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	429	CCG	P	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	428	GGG	G	R	ISONIAZID	23561273
katG_promoter_size_107bp	katG	424	GCG	A	V,E,G	ISONIAZID	19209951,19209951,19486070
katG_promoter_size_107bp	katG	419	GAC	D	H	ISONIAZID	23561273;19209951
katG_promoter_size_107bp	katG	418	CGA	R	L,Q	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	414	AAG	K	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	413	TAC	Y	H	ISONIAZID	19209951
katG_promoter_size_107bp	katG	409	GCC	A	D,R	ISONIAZID	19209951,24731071
katG_promoter_size_107bp	katG	397	TGG	W	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	394	ACG	T	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	393	ATC	I	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	384	CTG	L	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	381	GAC	D	G	ISONIAZID	19209951
katG_promoter_size_107bp	katG	380	ACT	T	I	ISONIAZID	23561273;19209951
katG_promoter_size_107bp	katG	379	GCC	A	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	378	CTG	L	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	365	CCG	P	L	ISONIAZID	23561273
katG_promoter_size_107bp	katG	361	GCC	A	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	357	GAC	D	N,H	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	352	CAA	Q	*	ISONIAZID	19486070;19209951
katG_promoter_size_107bp	katG	350	GCT	A	S,T	ISONIAZID	10884617;19209951,19209951
katG_promoter_size_107bp	katG	345	AAG	K	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	341	TGG	W	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	337	TAC	Y	F,C	ISONIAZID	19209951,23561273;19209951
katG_promoter_size_107bp	katG	336	CTG	L	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	335	ATC	I	T,V	ISONIAZID	19209951,23561273;19209951
katG_promoter_size_107bp	katG	331	AGT	S	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	328	TGG	W	C,L,S,G	ISONIAZID	19209951,19209951,19486070;19209951,19209951
katG_promoter_size_107bp	katG	326	ACG	T	M	ISONIAZID	23561273
katG_promoter_size_107bp	katG	324	ACC	T	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	321	TGG	W	C,*,L,S,R	ISONIAZID	19209951,19209951,19209951,19209951;24731071,19209951
katG_promoter_size_107bp	katG	318	GAG	E	V	ISONIAZID	24731071
katG_promoter_size_107bp	katG	317	ATC	I	V,L	ISONIAZID	23561273,19209951
katG_promoter_size_107bp	katG	316	GGC	G	D,S	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	315	AGC	S	R,I,N,T,G,L	ISONIAZID	Wang_et_al._2013;10884617;22461677;19209951,19209951,23561273;19486070;22461677;19209951,23561273;19486070;23995137;24055765;Wang_et_al._2013;10884617;22461677;Jin_et_al._2012;19209951;24731071,23561273;19209951,24731071
katG_promoter_size_107bp	katG	311	GAC	D	E,G,Y	ISONIAZID	19209951,19209951,19209951
katG_promoter_size_107bp	katG	309	GGT	G	D,C,S	ISONIAZID	19209951,19209951,19209951
katG_promoter_size_107bp	katG	308	ACC	T	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	307	GGA	G	E,A,R	ISONIAZID	19209951,19209951,19209951
katG_promoter_size_107bp	katG	305	GGC	G	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	304	TAT	Y	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	302	AGC	S	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	300	TGG	W	*,G	ISONIAZID	19209951,23561273;24055765;19209951
katG_promoter_size_107bp	katG	299	GGC	G	A,C	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	297	GGC	G	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	295	CAG	Q	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	291	GCT	A	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	289	GAG	E	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	285	GGC	G	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	281	GCC	A	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	280	CCG	P	H	ISONIAZID	24731071
katG_promoter_size_107bp	katG	279	GGC	G	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	275	ACC	T	S,A,P	ISONIAZID	19209951,19209951,24055765;10884617;19209951
katG_promoter_size_107bp	katG	264	GCG	A	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	262	ACA	T	R	ISONIAZID	10884617;19209951
katG_promoter_size_107bp	katG	261	GAA	E	K	ISONIAZID	23561273
katG_promoter_size_107bp	katG	259	GAC	D	E	ISONIAZID	23561273
katG_promoter_size_107bp	katG	258	AAC	N	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	257	ATG	M	I,T	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	252	TTT	F	L	ISONIAZID	19209951
katG_promoter_size_107bp	katG	251	ACG	T	M	ISONIAZID	19209951
katG_promoter_size_107bp	katG	249	CGC	R	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	243	GCC	A	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	241	CCC	P	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	238	AAC	N	K	ISONIAZID	19209951
katG_promoter_size_107bp	katG	236	AAC	N	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	234	GGG	G	E,R	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	230	GTG	V	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	229	TAC	Y	F	ISONIAZID	19209951
katG_promoter_size_107bp	katG	224	CAG	Q	E	ISONIAZID	19209951
katG_promoter_size_107bp	katG	218	AAC	N	K	ISONIAZID	19209951
katG_promoter_size_107bp	katG	200	AAG	K	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	198	TGG	W	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	195	GAG	E	K	ISONIAZID	19209951
katG_promoter_size_107bp	katG	191	TGG	W	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	186	GGC	G	V,H	ISONIAZID	19209951,24731071
katG_promoter_size_107bp	katG	180	ACG	T	K	ISONIAZID	19209951
katG_promoter_size_107bp	katG	176	ATG	M	I	ISONIAZID	19209951
katG_promoter_size_107bp	katG	172	GCG	A	V,T	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	169	GGC	G	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	162	GCG	A	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	160	TCA	S	L	ISONIAZID	19209951
katG_promoter_size_107bp	katG	155	TAC	Y	C,S	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	148	CTG	L	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	143	AAG	K	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	142	GAC	D	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	141	TTG	L	F	ISONIAZID	19209951
katG_promoter_size_107bp	katG	140	AGC	S	R,N,G	ISONIAZID	19209951,19209951,19209951
katG_promoter_size_107bp	katG	139	GCC	A	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	138	AAC	N	S,T,D,H	ISONIAZID	19209951,19209951,19209951,19209951
katG_promoter_size_107bp	katG	128	CGG	R	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	127	CAG	Q	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	126	ATG	M	I	ISONIAZID	19209951
katG_promoter_size_107bp	katG	125	GGC	G	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	121	GGC	G	V,C	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	117	GAC	D	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	110	GCC	A	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	109	GCT	A	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	108	CAC	H	Q,E,D	ISONIAZID	10884617;19209951,24731071,19209951
katG_promoter_size_107bp	katG	107	TGG	W	*,R	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	106	GCG	A	V	ISONIAZID	19209951
katG_promoter_size_107bp	katG	104	CGG	R	L,Q	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	99	GGG	G	E	ISONIAZID	19209951
katG_promoter_size_107bp	katG	96	GGC	G	C	ISONIAZID	19209951
katG_promoter_size_107bp	katG	94	GAC	D	G,A	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	91	TGG	W	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	90	TGG	W	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	88	CAG	Q	R	ISONIAZID	19209951
katG_promoter_size_107bp	katG	85	ACC	T	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	84	ATG	M	I	ISONIAZID	19209951
katG_promoter_size_107bp	katG	74	GAC	D	G,Y	ISONIAZID	19209951,19209951
katG_promoter_size_107bp	katG	72	GAC	D	G	ISONIAZID	19209951
katG_promoter_size_107bp	katG	71	ATC	I	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	66	GCG	A	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	65	GCC	A	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	63	GAC	D	E	ISONIAZID	10884617;19209951
katG_promoter_size_107bp	katG	61	GCG	A	T	ISONIAZID	19209951
katG_promoter_size_107bp	katG	48	CTG	L	Q	ISONIAZID	19209951
katG_promoter_size_107bp	katG	38	TGG	W	*	ISONIAZID	19209951
katG_promoter_size_107bp	katG	35	AAC	N	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	19	GGC	G	D	ISONIAZID	19209951
katG_promoter_size_107bp	katG	17	AGC	S	N	ISONIAZID	19209951
katG_promoter_size_107bp	katG	12	ACC	T	P	ISONIAZID	19209951
katG_promoter_size_107bp	katG	11	ACC	T	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG	2	CCC	P	S	ISONIAZID	19209951
katG_promoter_size_107bp	katG	1	GTG	V	A,L	ISONIAZID	19209951,19209951
ahpC_promoter_size_180bp	ahpC_promoter	-81	C	C	T	ISONIAZID	10884617
ahpC_promoter_size_180bp	ahpC_promoter	-74	G	G	A	ISONIAZID	10884617;19209951
ahpC_promoter_size_180bp	ahpC_promoter	-66	G	G	A	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-54	C	C	T	ISONIAZID	10884617;19209951
ahpC_promoter_size_180bp	ahpC_promoter	-52	C	C	T	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-51	G	G	T	ISONIAZID	10884617
ahpC_promoter_size_180bp	ahpC_promoter	-49	T	T	G	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-48	G	G	A,T	ISONIAZID	19209951,23561273;10884617
ahpC_promoter_size_180bp	ahpC_promoter	-44	T	T	A	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-39	C	C	T	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-20	C	C	T	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-5	G	G	A	ISONIAZID	19209951
ahpC_promoter_size_180bp	ahpC_promoter	-4	A	A	G	ISONIAZID	19209951
fabG1_promoter_size_223bp	fabG1_promoter	-92	A	A	T	ISONIAZID	19209951
fabG1_promoter_size_223bp	fabG1_promoter	-67	G	G	C	ISONIAZID	19209951
fabG1_promoter_size_223bp	fabG1_promoter	-24	G	G	T	ISONIAZID	10884617;19209951
fabG1_promoter_size_223bp	fabG1_promoter	-16	A	A	G	ISONIAZID	Jin_et_al._2012;19209951
fabG1_promoter_size_223bp	fabG1_promoter	-11	A	A	T	ISONIAZID	19209951
fabG1_promoter_size_223bp	fabG1_promoter	-8	T	T	A,C,G	ISONIAZID	10884617;22461677;Jin_et_al._2012;19209951,23561273;19486070;Jin_et_al._2012;19209951,10884617;22461677;19209951
fabG1_promoter_size_223bp	fabG1_promoter	-5	T	T	A	ISONIAZID	19209951
katG_promoter_size_107bp	katG_promoter	-7	G	G	A	ISONIAZID	24055765
katG_promoter_size_107bp	katG_promoter	-10	A	A	C	ISONIAZID	24055765
katG_promoter_size_107bp	katG_promoter	-12	G	G	A	ISONIAZID	24055765
eis_promoter_size_119bp	eis_promoter	-8	C	C	A	KANAMYCIN	23995137
eis_promoter_size_119bp	eis_promoter	-10	G	G	A,C	KANAMYCIN	23995137;23288402;23705640;22461677;22479378,22479378
eis_promoter_size_119bp	eis_promoter	-12	C	C	T	KANAMYCIN	23995137;23705640;22461677;22479378
eis_promoter_size_119bp	eis_promoter	-13	A	A	G	KANAMYCIN	23705640
eis_promoter_size_119bp	eis_promoter	-14	C	C	T	KANAMYCIN	23995137;23705640;22461677;22479378
eis_promoter_size_119bp	eis_promoter	-15	C	C	G	KANAMYCIN	22461677;22479378
eis_promoter_size_119bp	eis_promoter	-37	G	G	T	KANAMYCIN	23995137;23288402;23705640;22461677;22479378
eis_promoter_size_119bp	eis_promoter	-53	T	T	G	KANAMYCIN	23995137
eis_promoter_size_119bp	eis_promoter	-54	G	G	T	KANAMYCIN	23995137
rplC	rplC	154	TGT	C	R	LINEZOLID	22371899
rrl	rrl	2299	G	G	T	LINEZOLID	18070973
rrl	rrl	2814	G	G	T	LINEZOLID	18070973
thyA	thyA	222	CGC	R	G	Para-aminosalicyclic acid	19209951
thyA	thyA	101	TGG	W	R	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	75	CAC	H	N	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	22	ACC	T	A	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	36	TAT	Y	C	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	76	GGA	G	*	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	77	GTC	V	F	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	83	TGG	W	C,*	Para-aminosalicyclic acid	Zhang_et_al._2014,Zhang_et_al._2014
thyA	thyA	91	GGG	G	R	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	98	TGG	W	*	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	105	TCC	S	P	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	126	CGG	R	Q	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	152	TTC	F	V	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	161	TGT	C	Y	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	207	CAC	H	R	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	224	CCG	P	L	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	235	CGG	R	P	Para-aminosalicyclic acid	Zhang_et_al._2014
folC	folC	153	GAG	E	G,A	Para-aminosalicyclic acid	24366731;Zhang_et_al._2014,Zhang_et_al._2014
folC	folC	152	TTC	F	S,L	Para-aminosalicyclic acid	24366731,24366731
folC	folC	150	AGC	S	R,G,C	Para-aminosalicyclic acid	24366731,24366731;Zhang_et_al._2014,Zhang_et_al._2014
folC	folC	73	AAC	N	S	Para-aminosalicyclic acid	24366731
folC	folC	40	GAG	E	G,Q	Para-aminosalicyclic acid	24366731;Zhang_et_al._2014,Zhang_et_al._2014
folC	folC	183	GCC	A	P	Para-aminosalicyclic acid	24366731
folC	folC	49	CGG	R	W,P	Para-aminosalicyclic acid	24366731;Zhang_et_al._2014,Zhang_et_al._2014
folC	folC	20	ACT	T	P	Para-aminosalicyclic acid	Zhang_et_al._2014
folC	folC	43	ATC	I	T,S,A	Para-aminosalicyclic acid	24366731;Zhang_et_al._2014,Zhang_et_al._2014,24366731;Zhang_et_al._2014
folC	folC	56	CTG	L	V	Para-aminosalicyclic acid	Zhang_et_al._2014
folC	folC	91	CGG	R	W	Para-aminosalicyclic acid	Zhang_et_al._2014
ribD	ribD	8	GGA	G	R	Para-aminosalicyclic acid	Zhang_et_al._2014
pncA_promoter_size_107bp	pncA	185	AGC	S	I,T	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	182	TTG	L	S	PYRAZINAMIDE	23561273;22825123;19209951
pncA_promoter_size_107bp	pncA	181	GAG	E	D	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	180	GTC	V	F	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	179	AGC	S	R	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	175	ATG	M	I,R,V	PYRAZINAMIDE	22825123,24131688;23561273,22825123;17596354;19209951
pncA_promoter_size_107bp	pncA	174	GAG	E	G	PYRAZINAMIDE	24131688
pncA_promoter_size_107bp	pncA	172	CTG	L	R,P,A	PYRAZINAMIDE	22825123,22825123;19209951,24731071
pncA_promoter_size_107bp	pncA	171	GCG	A	V,E,T,P	PYRAZINAMIDE	19209951,22825123;19209951,19209951,19209951
pncA_promoter_size_107bp	pncA	168	ACC	T	N,P	PYRAZINAMIDE	19209951,24131688;23561273
pncA_promoter_size_107bp	pncA	165	GCC	A	T	PYRAZINAMIDE	19832709
pncA_promoter_size_107bp	pncA	162	GGT	G	D	PYRAZINAMIDE	24131688;19209951
pncA_promoter_size_107bp	pncA	161	GCG	A	P	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	160	ACA	T	P	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	159	CTG	L	R,P	PYRAZINAMIDE	24131688;23561273;19209951,22825123;19209951
pncA_promoter_size_107bp	pncA	155	GTG	V	G,A,L	PYRAZINAMIDE	22825123;19209951,23561273;19209951,23561273
pncA_promoter_size_107bp	pncA	154	AGG	R	M,G	PYRAZINAMIDE	22825123,19209951
pncA_promoter_size_107bp	pncA	153	ACC	T	N	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	148	CGC	R	S	PYRAZINAMIDE	17596354;19209951
pncA_promoter_size_107bp	pncA	146	GCG	A	V,T	PYRAZINAMIDE	19209951,23561273;22825123;19209951
pncA_promoter_size_107bp	pncA	143	GCC	A	T,P	PYRAZINAMIDE	22825123,22825123
pncA_promoter_size_107bp	pncA	142	ACG	T	M,K,A,P	PYRAZINAMIDE	23561273;22825123;19209951,22825123;19209951,19209951,19209951
pncA_promoter_size_107bp	pncA	141	CAG	Q	P,*	PYRAZINAMIDE	24131688;23561273;22825123;19209951,22825123;19209951
pncA_promoter_size_107bp	pncA	140	CGC	R	H,S,G	PYRAZINAMIDE	19832709,19209951,22825123
pncA_promoter_size_107bp	pncA	139	GTG	V	G,A,L,M	PYRAZINAMIDE	24131688;19209951,24131688;23561273;23995137;22825123;19209951,24131688;22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	138	TGT	C	*,Y,S	PYRAZINAMIDE	23561273,19209951,19209951
pncA_promoter_size_107bp	pncA	137	CAT	H	R,P	PYRAZINAMIDE	19209951,19832709;19209951
pncA_promoter_size_107bp	pncA	136	GAT	D	G,Y,N,H	PYRAZINAMIDE	24131688;23561273;22825123;19209951,23995137;17596354;19209951,19209951,19209951
pncA_promoter_size_107bp	pncA	135	ACC	T	P	PYRAZINAMIDE	24131688;23561273;23995137;19209951
pncA_promoter_size_107bp	pncA	134	GCC	A	V,S	PYRAZINAMIDE	22825123;19209951,19832709
pncA_promoter_size_107bp	pncA	133	ATT	I	N,T	PYRAZINAMIDE	19209951,17596354;19209951
pncA_promoter_size_107bp	pncA	132	GGT	G	V,D,A,S	PYRAZINAMIDE	22825123,23561273;19209951,24131688,17596354;19209951
pncA_promoter_size_107bp	pncA	131	GTC	V	F	PYRAZINAMIDE	23561273
pncA_promoter_size_107bp	pncA	130	GTG	V	G,A	PYRAZINAMIDE	19209951,23561273
pncA_promoter_size_107bp	pncA	128	GTC	V	G	PYRAZINAMIDE	23995137;19209951
pncA_promoter_size_107bp	pncA	125	GTC	V	D,G	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	121	CGG	R	P	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	120	CTG	L	P	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	119	TGG	W	C,*,R	PYRAZINAMIDE	23561273;19209951,19209951,23995137;19209951
pncA_promoter_size_107bp	pncA	118	AAT	N	T	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	116	CTG	L	R,P,V	PYRAZINAMIDE	19209951,22825123,19209951
pncA_promoter_size_107bp	pncA	114	ACG	T	A,P	PYRAZINAMIDE	19832709,19209951
pncA_promoter_size_107bp	pncA	108	GGA	G	R	PYRAZINAMIDE	23561273
pncA_promoter_size_107bp	pncA	107	GAA	E	*	PYRAZINAMIDE	22825123
pncA_promoter_size_107bp	pncA	104	AGC	S	R	PYRAZINAMIDE	23561273;22825123;19209951
pncA_promoter_size_107bp	pncA	103	TAC	Y	*,C,S,H	PYRAZINAMIDE	22825123;19209951,19209951,19209951,22825123;19209951
pncA_promoter_size_107bp	pncA	102	GCG	A	V,T	PYRAZINAMIDE	23995137;19209951,19209951
pncA_promoter_size_107bp	pncA	99	TAC	Y	*	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	97	GGT	G	D,S	PYRAZINAMIDE	19209951,23561273;19209951
pncA_promoter_size_107bp	pncA	96	AAG	K	N,T,E,Q	PYRAZINAMIDE	19209951,23561273;19209951,24131688;23561273;19209951,19209951
pncA_promoter_size_107bp	pncA	95	TAC	Y	*	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	94	TTC	F	L,S,P	PYRAZINAMIDE	24131688,24131688,24731071
pncA_promoter_size_107bp	pncA	90	ATC	I	S	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	88	TCG	S	*	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	87	ACG	T	M	PYRAZINAMIDE	22825123;19209951
pncA_promoter_size_107bp	pncA	85	CTG	L	R,P	PYRAZINAMIDE	22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	82	CAT	H	L,R,Y,D	PYRAZINAMIDE	19209951,24131688;23561273;22825123;19209951,19209951,22825123
pncA_promoter_size_107bp	pncA	81	TTC	F	V	PYRAZINAMIDE	24131688
pncA_promoter_size_107bp	pncA	79	GCG	A	G	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	78	GGC	G	D,S	PYRAZINAMIDE	19209951,19832709
pncA_promoter_size_107bp	pncA	76	ACT	T	I,P	PYRAZINAMIDE	19209951,24131688;23561273;22825123;19209951
pncA_promoter_size_107bp	pncA	72	TGC	C	*,W,Y,R	PYRAZINAMIDE	23561273,17596354;19209951,22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	71	CAT	H	R,Y,N,D	PYRAZINAMIDE	19209951,22825123;19209951,22825123,19209951
pncA_promoter_size_107bp	pncA	69	CCA	P	L,R	PYRAZINAMIDE	19209951,23561273;19209951
pncA_promoter_size_107bp	pncA	68	TGG	W	*,L,S,R,G	PYRAZINAMIDE	23561273;19209951,19209951,19209951,22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	67	TCG	S	P	PYRAZINAMIDE	22825123;19209951
pncA_promoter_size_107bp	pncA	66	TCG	S	P	PYRAZINAMIDE	24131688;19209951
pncA_promoter_size_107bp	pncA	64	TAT	Y	D	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	63	GAC	D	G,A,H	PYRAZINAMIDE	22825123;19209951,22825123,19209951
pncA_promoter_size_107bp	pncA	62	CCG	P	L,R	PYRAZINAMIDE	23561273;19209951,19209951
pncA_promoter_size_107bp	pncA	61	ACA	T	P	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	59	TCC	S	P	PYRAZINAMIDE	23561273;23995137;22825123;19832709;19209951
pncA_promoter_size_107bp	pncA	58	TTC	F	L,S	PYRAZINAMIDE	23561273;23995137;19209951,24131688
pncA_promoter_size_107bp	pncA	57	CAC	H	L,R,P,Y,N,D	PYRAZINAMIDE	19209951,22825123,19209951,24131688;19209951,22825123,19209951
pncA_promoter_size_107bp	pncA	54	CCG	P	L,Q,T	PYRAZINAMIDE	24131688;17596354;19832709;19209951,23561273;22825123,19209951
pncA_promoter_size_107bp	pncA	53	GAC	D	A,N	PYRAZINAMIDE	19209951,17596354;19209951
pncA_promoter_size_107bp	pncA	51	CAC	H	Q,R,P,Y,N	PYRAZINAMIDE	17596354;19832709;19209951,22825123;19209951,23561273;19209951,22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	49	GAC	D	V,G,A,N,H	PYRAZINAMIDE	19209951,23561273;19209951,23561273;22825123;19209951,23561273;22825123,19209951
pncA_promoter_size_107bp	pncA	47	ACC	T	S,A,P	PYRAZINAMIDE	19209951,24131688;23995137;19209951,23561273;19209951
pncA_promoter_size_107bp	pncA	46	GCA	A	V,E,P	PYRAZINAMIDE	23561273;22825123;19209951,19209951,19209951
pncA_promoter_size_107bp	pncA	45	GTG	V	G	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	44	GTC	V	G	PYRAZINAMIDE	23995137
pncA_promoter_size_107bp	pncA	43	CAC	H	P	PYRAZINAMIDE	22825123;19209951
pncA_promoter_size_107bp	pncA	41	TAC	Y	*,H	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	37	GAA	E	*	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	35	CTG	L	R,P	PYRAZINAMIDE	19209951,22825123;19209951
pncA_promoter_size_107bp	pncA	34	TAC	Y	*,S,D	PYRAZINAMIDE	22825123,19209951,19832709
pncA_promoter_size_107bp	pncA	31	ATC	I	S	PYRAZINAMIDE	22825123
pncA_promoter_size_107bp	pncA	28	GCC	A	D	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	27	CTG	L	P	PYRAZINAMIDE	17596354
pncA_promoter_size_107bp	pncA	26	GCG	A	G	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	25	GCC	A	E	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	24	GGC	G	D,R	PYRAZINAMIDE	24131688;22825123,22825123
pncA_promoter_size_107bp	pncA	23	GGT	G	V	PYRAZINAMIDE	19209951;24731071
pncA_promoter_size_107bp	pncA	21	GTA	V	G	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	19	CTG	L	R,P	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	18	TCG	S	P	PYRAZINAMIDE	24131688
pncA_promoter_size_107bp	pncA	17	GGC	G	V,D	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	14	TGC	C	*,W,Y,G,R	PYRAZINAMIDE	22825123,23561273,19209951,23561273,19209951
pncA_promoter_size_107bp	pncA	13	TTC	F	L,S	PYRAZINAMIDE	24131688;22825123,19209951
pncA_promoter_size_107bp	pncA	12	GAC	D	A,N	PYRAZINAMIDE	23561273;22825123;17596354;19209951,22825123;19209951
pncA_promoter_size_107bp	pncA	10	CAG	Q	R,P,*,K	PYRAZINAMIDE	19209951,24131688;22825123;17596354;19209951;24731071,23561273;22825123;19209951,19209951
pncA_promoter_size_107bp	pncA	9	GTG	V	G,A,L,S	PYRAZINAMIDE	22825123;19832709;19209951,19209951,19209951,24731071
pncA_promoter_size_107bp	pncA	8	GAC	D	E,G,A,Y,N	PYRAZINAMIDE	19209951,23561273;19209951,24131688;22825123,22825123;19209951,22825123
pncA_promoter_size_107bp	pncA	7	GTC	V	D,G,F,I	PYRAZINAMIDE	19209951,19209951,19209951,19209951
#pncA_promoter_size_107bp	pncA	6	ATC	I	S,L	PYRAZINAMIDE	23561273,23561273;23995137
pncA_promoter_size_107bp	pncA	6	ATC	I	S	PYRAZINAMIDE	23561273
pncA_promoter_size_107bp	pncA	5	ATC	I	S	PYRAZINAMIDE	19209951
pncA_promoter_size_107bp	pncA	4	TTG	L	W,S	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	3	GCG	A	E,P	PYRAZINAMIDE	19209951,19209951
pncA_promoter_size_107bp	pncA	1	ATG	M	I,T	PYRAZINAMIDE	22825123;19209951,22825123;19209951
rpsA	rpsA	433	GAG	E	D	PYRAZINAMIDE	24131688
rpsA	rpsA	474	CGG	R	W,L	PYRAZINAMIDE	24131688,24131688
panD	panD	128	GCG	A	S	PYRAZINAMIDE	26038471
panD	panD	138	GTG	V	A,G,E,A	PYRAZINAMIDE	26038471,26038753,26038753,26038753
panD	panD	49	ATC	I	V	PYRAZINAMIDE	26038471
panD	panD	21	CAC	H	R	PYRAZINAMIDE	26038471
panD	panD	130	GAG	E	G	PYRAZINAMIDE	26038471
panD	panD	117	ATG	M	I	PYRAZINAMIDE	26038753
panD	panD	136	CTC	L	R	PYRAZINAMIDE	26038753
panD	panD	126	GAA	E	*	PYRAZINAMIDE	26038753
pncA_promoter_size_107bp	pncA_promoter	-7	T	T	C	PYRAZINAMIDE	22825123;19832709;19209951
pncA_promoter_size_107bp	pncA_promoter	-10	T	T	C	PYRAZINAMIDE	22825123
pncA_promoter_size_107bp	pncA_promoter	-11	A	A	G,C	PYRAZINAMIDE	24131688;22825123;19209951,19209951
pncA_promoter_size_107bp	pncA_promoter	-12	T	T	G,C	PYRAZINAMIDE	19209951,22825123
rpoB	rpoB	170	GTC	V	F	RIFAMPICIN	24731071
rpoB	rpoB	286	GCG	A	V	RIFAMPICIN	24731071
rpoB	rpoB	400	ACC	T	A	RIFAMPICIN	23561273
rpoB	rpoB	409	CAG	Q	H	RIFAMPICIN	19209951
rpoB	rpoB	423	GAG	E	A	RIFAMPICIN	19209951
rpoB	rpoB	424	TTC	F	L,V,S	RIFAMPICIN	19209951,23561273,19209951
rpoB	rpoB	426	GGC	G	S,D	RIFAMPICIN	19209951,19209951;24731071
rpoB	rpoB	427	ACC	T	S,P,A,H	RIFAMPICIN	19209951,19209951,19209951,24731071
rpoB	rpoB	428	AGC	S	R,Q,I,T	RIFAMPICIN	23561273;19209951,24731071,23561273,22461677;19209951
rpoB	rpoB	429	CAG	Q	K,H	RIFAMPICIN	19209951,24055765;22461677;19864480;19209951
rpoB	rpoB	430	CTG	L	V,P,R	RIFAMPICIN	19209951,23561273;23995137;Shi_et_al._2013;22461677;19864480;19209951,Shi_et_al._2013;22461677;19864480;19209951
rpoB	rpoB	431	AGC	S	R,G,I,T	RIFAMPICIN	19209951,23995137;19209951,24055765;19209951,19209951
rpoB	rpoB	432	CAA	Q	N,K,*,E,L,P,R,H	RIFAMPICIN	24731071,19864480;19209951,19209951,19209951,23561273;24055765;19864480;19209951,23561273;22461677;19864480;19209951,19209951,19209951
rpoB	rpoB	433	TTC	F	L,V	RIFAMPICIN	19209951,19209951
rpoB	rpoB	434	ATG	M	T,I	RIFAMPICIN	23561273,23561273;24055765;19209951
rpoB	rpoB	435	GAC	D	F,N,Y,H,V,A,G,E	RIFAMPICIN	24731071,19209951,24055765;Wang_et_al._2013;22461677;19864480;19209951,19209951,23561273;23995137;24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951;24731071,,19209951,24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;19209951,19209951
rpoB	rpoB	436	CAG	Q	L,H	RIFAMPICIN	19209951,19209951
rpoB	rpoB	437	AAC	N	Y,H,D,I,T	RIFAMPICIN	19209951,19209951,19209951,19209951,19209951
rpoB	rpoB	438	AAC	N	K	RIFAMPICIN	19209951
rpoB	rpoB	440	CTG	L	M,L,P	RIFAMPICIN	19209951,19209951,19209951
rpoB	rpoB	441	TCG	S	Q,L,W	RIFAMPICIN	24731071,23561273;19864480;19209951,19864480;19209951
rpoB	rpoB	442	GGG	G	W,A	RIFAMPICIN	19209951,19209951
rpoB	rpoB	443	TTG	L	S,W	RIFAMPICIN	19209951,19209951
rpoB	rpoB	444	ACC	T	P,I	RIFAMPICIN	19209951,19209951
#rpoB	rpoB	445	CAC	H	F,G,N,Y,D,L,P,R,Q	RIFAMPICIN	24731071,24731071,23995137;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;19209951,23561273;24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951,24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951,24731071;23561273;22461677;19864480;19209951,19864480;19209951,Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;19209951,23561273;23995137;19209951
rpoB	rpoB	445	CAC	H	F,G,Y,D,L,P,R,Q	RIFAMPICIN	24731071,24731071,23561273;24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951,24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951,24731071;23561273;22461677;19864480;19209951,19864480;19209951,Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;19209951,23561273;23995137;19209951
rpoB	rpoB	446	AAG	K	Q,N	RIFAMPICIN	19209951,19209951
rpoB	rpoB	447	CGC	R	P,H	RIFAMPICIN	24731071;19209951,19209951
rpoB	rpoB	450	TCG	S	Q,L,W,F,Y	RIFAMPICIN	24731071,23561273;23995137;24055765;Shi_et_al._2013;Wang_et_al._2013;22461677;19864480;Jin_et_al._2012;19209951,22461677;19864480;19209951,24731071,24731071
rpoB	rpoB	452	CTG	L	P	RIFAMPICIN	24731071;23561273;22461677;19864480;19209951
rpoB	rpoB	454	CCC	P	S,H,L,R	RIFAMPICIN	19209951,19209951,23561273;22461677,22461677
rpoB	rpoB	457	CTG	L	P	RIFAMPICIN	19209951
rpoB	rpoB	460	GAG	E	G	RIFAMPICIN	19209951
rpoB	rpoB	464	CTG	L	M	RIFAMPICIN	19209951
rpoB	rpoB	472	TCG	S	A	RIFAMPICIN	19209951
rpoB	rpoB	480	ATC	I	V,T	RIFAMPICIN	23995137;19209951,19209951
rpoB	rpoB	481	GAA	E	G	RIFAMPICIN	19209951
rpoB	rpoB	482	ACC	T	P	RIFAMPICIN	23561273
rpoB	rpoB	483	CCT	P	L	RIFAMPICIN	19209951
rpoB	rpoB	490	CTG	L	V	RIFAMPICIN	19209951
rpoB	rpoB	491	ATC	I	F	RIFAMPICIN	24055765;19209951
rpoB	rpoB	493	TCG	S	L	RIFAMPICIN	19209951
rpoB	rpoB	552	CGC	R	C	RIFAMPICIN	19209951
rpoB	rpoB	592	GAG	E	D	RIFAMPICIN	24731071
rpoB	rpoB	761	GAG	E	D	RIFAMPICIN	23995137
rpoC	rpoC	332	GGC	G	R	RIFAMPICIN	23995137
rpoC	rpoC	452	TTC	F	S	RIFAMPICIN	23995137
rpoC	rpoC	485	GAT	D	N	RIFAMPICIN	23995137
rpoC	rpoC	491	ATC	I	T	RIFAMPICIN	23995137
rpoC	rpoC	527	TTG	L	V	RIFAMPICIN	23995137
rpoC	rpoC	735	GAC	D	N	RIFAMPICIN	23995137
rpoC	rpoC	747	GAC	D	A	RIFAMPICIN	23995137
rpoC	rpoC	885	ATC	I	V	RIFAMPICIN	23995137
rpsL	rpsL	9	CGC	R	H	STREPTOMYCIN	19209951
rpsL	rpsL	40	ACC	T	I	STREPTOMYCIN	19209951
rpsL	rpsL	41	ACT	T	S	STREPTOMYCIN	19209951
rpsL	rpsL	43	AAG	K	T,R	STREPTOMYCIN	19209951,23561273;23906937;19209951
rpsL	rpsL	51	AAG	K	N	STREPTOMYCIN	19209951
rpsL	rpsL	52	GTT	V	G	STREPTOMYCIN	19209951
rpsL	rpsL	84	GGC	G	V	STREPTOMYCIN	19209951
rpsL	rpsL	86	CGG	R	W,P	STREPTOMYCIN	19209951,19209951
rpsL	rpsL	87	GTG	V	L	STREPTOMYCIN	19209951
rpsL	rpsL	88	AAG	K	Q,M,T,R	STREPTOMYCIN	23906937;19209951,19209951,23906937;19209951,23561273;23906937;19209951
rpsL	rpsL	93	GTG	V	M	STREPTOMYCIN	19209951
rrs	rrs	190	G	G	A	STREPTOMYCIN	19209951
rrs	rrs	277	G	G	C	STREPTOMYCIN	23561273;23906937
rrs	rrs	427	G	G	T,C	STREPTOMYCIN	19209951,19209951
rrs	rrs	462	C	C	T	STREPTOMYCIN	19209951
#rrs	rrs	492	C	C	T	STREPTOMYCIN	19209951
rrs	rrs	513	C	C	T	STREPTOMYCIN	19209951
rrs	rrs	514	A	A	T,C	STREPTOMYCIN	19209951,23561273;19209951
rrs	rrs	516	C	C	T	STREPTOMYCIN	23906937
rrs	rrs	628	G	G	C	STREPTOMYCIN	19209951
rrs	rrs	799	C	C	T	STREPTOMYCIN	19209951
rrs	rrs	888	G	G	A	STREPTOMYCIN	19209951
rrs	rrs	905	C	C	A,G	STREPTOMYCIN	19209951,19209951
rrs	rrs	906	A	A	G	STREPTOMYCIN	19209951
rrs	rrs	907	A	A	T,C	STREPTOMYCIN	23561273;23906937;19209951,19209951
rrs	rrs	908	A	A	G	STREPTOMYCIN	19209951
rrs	rrs	1229	C	C	T	STREPTOMYCIN	23561273;23906937
rrs	rrs	1239	T	T	C	STREPTOMYCIN	19209951
rrs	rrs	1402	C	C	T	STREPTOMYCIN	23906937
#Stop codons
katG_promoter_size_107bp	katG	1	N	N	*	ISONIAZID	-
ethA_promoter_size_74bp	ethA	1	N	N	*	ETHIONAMIDE	-
pncA_promoter_size_107bp	pncA	1	N	N	*	PYRAZINAMIDE	-
gidB	gidB	1	N	N	*	STREPTOMYCIN	-
#New mutations with high frequency in GWAS study, PMID:29358649
iniA	iniA	42	CAC	H	R	d-cycloserine	29358649
alr	alr	113	CTG	L	R	D-CYCLOSERINE	29358649
ubiA	ubiA	188	GTG	V	A	ETHAMBUTOL	29358649
ubiA	ubiA	249	GCG	A	T	ETHAMBUTOL	29358649
gidB	gidB	79	TTG	L	S	STREPTOMYCIN	29358649
gidB	gidB	80	GCG	A	P	STREPTOMYCIN	29358649
gidB	gidB	149	AGC	S	R	STREPTOMYCIN	29358649
idsA2_promoter_size_181bp	idsA2_promoter	-65	A	A	G	CAPREOMYCIN	29358649
thyX_promoter_size_259bp	thyX_promoter	-16	C	C	T	Para-aminosalicyclic acid	29358649
ethA_promoter_size_74bp	ethA_promoter	-65	T	T	C	ETHIONAMIDE	29358649
#nuoA_promoter_size_365bp	nuoA_promoter	1	-314	G	G	T	XDR-TB	29358649
nuoA_promoter_size_365bp	nuoA_promoter	-314	G	G	T	XDR-TB	29358649
rpoB	rpoB	731	CTG	L	P	RIFAMPICIN	29358649
rpoC	rpoC	416	AAC	N	S	RIFAMPICIN	29358649
rpoC	rpoC	483	GTG	V	A	RIFAMPICIN	29358649
rpoC	rpoC	483	GTG	V	G	RIFAMPICIN	29358649
rpoC	rpoC	484	TGG	W	G	RIFAMPICIN	29358649
rpoC	rpoC	491	ATC	I	V	RIFAMPICIN	29358649
rpoC	rpoC	516	CTG	L	P	RIFAMPICIN	29358649
rpoC	rpoC	698	AAC	N	S	RIFAMPICIN	29358649
rpoC	rpoC	1040	CCG	P	S	RIFAMPICIN	29358649
rpoC	rpoC	1040	CCG	P	R	RIFAMPICIN	29358649
rpoC	rpoC	1152	AAG	K	Q	RIFAMPICIN	29358649
rpoC	rpoC	1252	GTG	V	L	RIFAMPICIN	29358649
rrs	rrs	513	C	C	T	STREPTOMYCIN	29358649
rrs	rrs	514	A	A	T	STREPTOMYCIN	29358649
#pncA_promoter_size_107bp	pncA	1	151	TTG	L	S	PYRAZINAMIDE	29358649
pncA_promoter_size_107bp	pncA	151	TTG	L	S	PYRAZINAMIDE	29358649
#embB	embB	1	423	ATG	M	T	ETHAMBUTOL	29358649
embB	embB	423	ATG	M	T	ETHAMBUTOL	29358649
#ahpC_promoter_size_180bp	ahpC_promoter	1	-72	C	C	T	ISONIAZID	29358649
ahpC_promoter_size_180bp	ahpC_promoter	-72	C	C	T	ISONIAZID	29358649
#embA_promoter_size_115bp	embA_promoter	1	-8	C	C	T	ETHAMBUTOL	29358649
embA_promoter_size_115bp	embA_promoter	-8	C	C	T	ETHAMBUTOL	29358649
#embA_promoter_size_115bp	embA_promoter	1	-12	C	C	A	ETHAMBUTOL	29358649
embA_promoter_size_115bp	embA_promoter	-12	C	C	A	ETHAMBUTOL	29358649
#embA_promoter_size_115bp	embA_promoter	1	-16	C	C	G	ETHAMBUTOL	29358649
embA_promoter_size_115bp	embA_promoter	-16	C	C	G	ETHAMBUTOL	29358649
#embA_promoter_size_115bp	embA_promoter	1	-43	G	G	C	ETHAMBUTOL	29358649
embA_promoter_size_115bp	embA_promoter	-43	G	G	C	ETHAMBUTOL	29358649
#drrA	drrA	1	262	AGG	R	G	XDR-TB	29358649
drrA	drrA	262	AGG	R	G	XDR-TB	29358649
#Indels
#Gene_id	Gene_name	Nuc_pos	-	Mut_type	Insert/deletion	Drug	Pmid
tlyA	tlyA	23	-	del	A	CAPREOMYCIN	19209951
tlyA	tlyA	26	-	del	C	CAPREOMYCIN	19209951
tlyA	tlyA	67	-	del	GCC	CAPREOMYCIN	19209951
tlyA	tlyA	310	-	del	G	CAPREOMYCIN	19209951
tlyA	tlyA	400	-	del	A	CAPREOMYCIN	19209951
tlyA	tlyA	477	-	del	G	CAPREOMYCIN	19209951
tlyA	tlyA	586	-	del	G	CAPREOMYCIN	19209951
tlyA	tlyA	653	-	del	T	CAPREOMYCIN	19209951
tlyA	tlyA	673	-	del	GT	CAPREOMYCIN	19209951
tlyA	tlyA	758	-	del	C	CAPREOMYCIN	19209951
embB	embB	983	-	del	A	ETHAMBUTOL	19209951
ethA_promoter_size_74bp	ethA	1322	-	del	GC	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	1290	-	del	C	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	768	-	del	G	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	703	-	del	T	ETHIONAMIDE	19209951
ethA_promoter_size_74bp	ethA	110	-	del	A	ETHIONAMIDE	19209951
katG_promoter_size_107bp	katG	2203	-	del	GAC	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	1667	-	del	C	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	1203	-	del	C	ISONIAZID	24731071
katG_promoter_size_107bp	katG	1091	-	del	T	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	1037	-	del	G	ISONIAZID	24731071
katG_promoter_size_107bp	katG	928	-	del	A	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	803	-	del	G	ISONIAZID	24731071
katG_promoter_size_107bp	katG	795	-	del	G	ISONIAZID	19209951
katG_promoter_size_107bp	katG	572	-	del	G	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	561	-	del	G	ISONIAZID	19209951
katG_promoter_size_107bp	katG	358	-	del	GGCGGCGCCGGG	ISONIAZID	24731071
katG_promoter_size_107bp	katG	152	-	del	ACCCGGCCGTCGCTG	ISONIAZID	24731071
katG_promoter_size_107bp	katG	149	-	del	A	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	109	-	del	G	ISONIAZID	24731071;19209951
katG_promoter_size_107bp	katG	28	-	del	GAAACCAC	ISONIAZID	24731071
katG_promoter_size_107bp	katG	1850	-	ins	AC	ISONIAZID	24731071
katG_promoter_size_107bp	katG	1560	-	ins	TGCAGCCACAAGTCGGGTGGGAGGTCAACGACCCCGACGGGGATCTGCGCAAGGTCATTCGCAC	ISONIAZID	24731071
katG_promoter_size_107bp	katG	1330	-	ins	A	ISONIAZID	24731071
katG_promoter_size_107bp	katG	1171	-	ins	CTA	ISONIAZID	24731071
katG_promoter_size_107bp	katG	902	-	ins	T	ISONIAZID	24731071
katG_promoter_size_107bp	katG	374	-	ins	CAT	ISONIAZID	24731071
katG_promoter_size_107bp	katG	373	-	ins	G	ISONIAZID	24731071
katG_promoter_size_107bp	katG	196	-	ins	CCCC	ISONIAZID	24731071
katG_promoter_size_107bp	katG	186	-	ins	C	ISONIAZID	24731071
katG_promoter_size_107bp	katG	99	-	ins	A	ISONIAZID	24731071
thyA	thyA	86	-	del	C	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	111	-	del	T	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	472	-	del	C	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	218	-	ins	CACGAGCAC	Para-aminosalicyclic acid	Zhang_et_al._2014
thyA	thyA	373	-	ins	T	Para-aminosalicyclic acid	Zhang_et_al._2014
pncA_promoter_size_107bp	pncA	512	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	475	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	446	-	del	ATGGCTTG	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	452	-	del	T	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	443	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	436	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	416	-	del	TG	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	406	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	395	-	del	GTATTGCCACC	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	391	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	379	-	del	GAGGTCGATGT	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	386	-	del	ATGT	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	381	-	del	GG	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	341	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	312	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	307	-	del	TACAG	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	288	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	239	-	del	A	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	172	-	del	T	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	162	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	161	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	158	-	del	A	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	118	-	del	GACTACCATCACGTCGTGGCAACCAAGGACTTC	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	88	-	del	GCCATCAGCGACTACCTGGCCGAA	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	84	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	71	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	70	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	64	-	del	A	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	59	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	47	-	del	G	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	28	-	del	C	PYRAZINAMIDE	24731071;19209951
pncA_promoter_size_107bp	pncA	1	-	del	ATGCGGGCGTT,ATGCGGGC	PYRAZINAMIDE	24731071,24731071
pncA_promoter_size_107bp	pncA	533	-	ins	C	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	519	-	ins	NNNNN	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	502	-	ins	GC	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	481	-	ins	TGAC	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	466	-	ins	T	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	429	-	ins	GG	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	421	-	ins	GG,G	PYRAZINAMIDE	24731071,24731071
pncA_promoter_size_107bp	pncA	415	-	ins	G	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	408	-	ins	C	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	404	-	ins	C	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	398	-	ins	T	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	393	-	ins	G	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	392	-	ins	GG	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	389	-	ins	GAGGTCGAT,AGGTCGATG	PYRAZINAMIDE	24731071,24731071
pncA_promoter_size_107bp	pncA	383	-	ins	AG	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	369	-	ins	NNNNNNNNNNNNNNNNNN,AG	PYRAZINAMIDE	24731071,24731071
pncA_promoter_size_107bp	pncA	307	-	ins	C	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	302	-	ins	G,A	PYRAZINAMIDE	24731071,24731071
pncA_promoter_size_107bp	pncA	288	-	ins	T	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	222	-	ins	G	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	219	-	ins	CGCATTGCCG	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	193	-	ins	A	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	163	-	ins	T	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	137	-	ins	G	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	101	-	ins	T	PYRAZINAMIDE	24731071
pncA_promoter_size_107bp	pncA	53	-	ins	GG	PYRAZINAMIDE	24731071
panD	panD	393	-	del	G	PYRAZINAMIDE	26038753
rpoB	rpoB	1275	-	del	CGGCAC	RIFAMPICIN	24731071
rpoB	rpoB	1276	-	del	GGCACC	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1294	-	del	CAATTC	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1295	-	del	AATTCATGG	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1297	-	del	TTCATGGAC,TTC	RIFAMPICIN	19209951;24731071,19209951
rpoB	rpoB	1299	-	del	CAT,CATGGACCAGAA	RIFAMPICIN	24731071;19209951,24731071
rpoB	rpoB	1300	-	del	ATGGACCAGAAC	RIFAMPICIN	19209951;24731071
rpoB	rpoB	1303	-	del	GACCAG	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1306	-	del	CAGAAC,CAG	RIFAMPICIN	24731071;19209951,24731071
rpoB	rpoB	1308	-	del	GAACAA	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1312	-	del	AAC	RIFAMPICIN	24731071;19209951
rpoB	rpoB	1336	-	del	AAG	RIFAMPICIN	19209951;24731071
rpoB	rpoB	1294	-	ins	TTCATG,TTC	RIFAMPICIN	24731071,24731071
rpoB	rpoB	1297	-	ins	CGG	RIFAMPICIN	24731071
rpoB	rpoB	1300	-	ins	TTC	RIFAMPICIN	24731071
Rv0678	Rv0678	193	-	ins	G	BEDAQUILINE,CLOFAZIMINE	25010492
Rv0678	Rv0678	39	-	ins	A	BEDAQUILINE,CLOFAZIMINE	25010492
