MANIFEST.in
README.rst
setup.cfg
setup.py
data/data_file
sprint/__init__.py
sprint/pipeline.py
sprint/sprint_main.py
sprint/sprint_prepare.py
sprint.egg-info/PKG-INFO
sprint.egg-info/PKG-INFO~
sprint.egg-info/SOURCES.txt
sprint.egg-info/dependency_links.txt
sprint.egg-info/entry_points.txt
sprint.egg-info/requires.txt
sprint.egg-info/top_level.txt
sprint/tools_bed/__init__.py
sprint/tools_bed/annotate.py
sprint/tools_bed/bed_or.py
sprint/tools_bed/bed_sort.py
sprint/tools_bed/combine.py
sprint/tools_bed/combine_res.py
sprint/tools_bed/hyper_or.py
sprint/tools_bed/o2b.py
sprint/tools_bed/remain.py
sprint/tools_bed/remove.py
sprint/tools_bed/seperate.py
sprint/tools_bed/snv_or.py
sprint/tools_fa/__init__.py
sprint/tools_fa/maskAwithG.py
sprint/tools_fa/maskTwithC.py
sprint/tools_fa/transcript_assembler.py
sprint/tools_fa/transcript_locator.py
sprint/tools_fa/transcript_sort.py
sprint/tools_fq/__init__.py
sprint/tools_fq/cut.py
sprint/tools_fq/get_baseq_cutoff.py
sprint/tools_fq/maskfq.py
sprint/tools_sam/__init__.py
sprint/tools_sam/change_sam_read_name.py
sprint/tools_sam/recover_sam.py
sprint/tools_sam/umsam2fq.py
sprint/tools_zf/__init__.py
sprint/tools_zf/combine_depth.py
sprint/tools_zf/dedup.py
sprint/tools_zf/get_depth.py
sprint/tools_zf/get_depth_old.py
sprint/tools_zf/get_epm.py
sprint/tools_zf/get_res.py
sprint/tools_zf/get_snv_with_ad.py
sprint/tools_zf/mask_zz2snv.py
sprint/tools_zf/mask_zz2snv.py_bac.py
sprint/tools_zf/random_select.py
sprint/tools_zf/sam2zz.py
sprint/tools_zf/snv_cluster.py
sprint/tools_zf/zz2snv.py