.gitignore
.pre-commit-config.yaml
LICENSE
MANIFEST.in
Makefile
README.md
pyproject.toml
pytest.ini
requirements.txt
setup.cfg
setup.py
.claude/memory/defaults-principle.md
.claude/memory/doc-update-rule.md
.github/workflows/ci.yml
.github/workflows/release.yml
docs/architecture.md
docs/gpu_integration_plan.md
docs/usage.md
spkmc/__init__.py
spkmc/_version.py
spkmc.egg-info/PKG-INFO
spkmc.egg-info/SOURCES.txt
spkmc.egg-info/dependency_links.txt
spkmc.egg-info/entry_points.txt
spkmc.egg-info/requires.txt
spkmc.egg-info/top_level.txt
spkmc/analysis/__init__.py
spkmc/analysis/ai_analyzer.py
spkmc/analysis/metrics.py
spkmc/analysis/prompts.py
spkmc/cli/__init__.py
spkmc/cli/__main__.py
spkmc/cli/commands.py
spkmc/cli/display.py
spkmc/cli/formatting.py
spkmc/cli/utils.py
spkmc/cli/validators.py
spkmc/core/__init__.py
spkmc/core/distributions.py
spkmc/core/engine.py
spkmc/core/networks.py
spkmc/core/simulation.py
spkmc/core/transmissibility.py
spkmc/io/__init__.py
spkmc/io/data_manager.py
spkmc/io/experiments.py
spkmc/models/__init__.py
spkmc/models/config.py
spkmc/models/experiment.py
spkmc/models/result.py
spkmc/models/scenario.py
spkmc/utils/__init__.py
spkmc/utils/gpu_utils.py
spkmc/utils/hardware.py
spkmc/utils/numba_utils.py
spkmc/utils/parallel.py
spkmc/visualization/__init__.py
spkmc/visualization/plots.py
spkmc/web/__init__.py
spkmc/web/analysis_runner.py
spkmc/web/app.py
spkmc/web/components.py
spkmc/web/config.py
spkmc/web/plotting.py
spkmc/web/runner.py
spkmc/web/state.py
spkmc/web/styles.py
spkmc/web/pages/__init__.py
spkmc/web/pages/dashboard.py
spkmc/web/pages/experiment_detail.py
spkmc/web/pages/settings.py
tests/__init__.py
tests/conftest.py
tests/test_analysis.py
tests/test_analyze_results_dir.py
tests/test_cli_commands.py
tests/test_cli_validators.py
tests/test_distributions.py
tests/test_engine.py
tests/test_export.py
tests/test_fast_edge_generators.py
tests/test_gpu_simulation.py
tests/test_hardware.py
tests/test_integration.py
tests/test_models.py
tests/test_networks.py
tests/test_parallel.py
tests/test_plot_improvements.py
tests/test_results.py
tests/test_simulation.py
tests/test_transmissibility.py
tests/e2e/__init__.py
tests/e2e/conftest.py
tests/e2e/test_dashboard.py
tests/e2e/test_experiment_detail.py
tests/e2e/test_navigation.py
tests/e2e/test_settings.py
tests/e2e/fixtures/experiments/e2e_smoke_exp/data.json
tests/test_web/__init__.py
tests/test_web/test_analysis_runner.py
tests/test_web/test_config.py
tests/test_web/test_experiment_detail.py
tests/test_web/test_plotting.py
tests/test_web/test_runner.py
tests/test_web/test_state.py