LICENSE
Pipfile
README.md
setup.cfg
setup.py
bin/pipeline-functions.sh
docs/apinatomy-server-diagram.graphml
docs/apinatomy.org
docs/background.org
docs/developer-guide.org
docs/notes.org
docs/participants.org
docs/queries.org
docs/recuration.graphml
docs/release.org
docs/setup.org
docs/sparc-curation-pipelines.graphml
docs/workflows.org
docs/sckan/CHANGELOG.org
docs/sckan/README.org
docs/sckan/examples.org
docs/sckan/overview.org
docs/sckan/queries.org
docs/sckan/scratch.org
docs/sckan/tutorial.org
docs/sckan/welcome.org
docs/simple-sckan/readme.md
resources/mimetypes.json
resources/DatasetTemplate/CHANGES
resources/DatasetTemplate/README.md
resources/DatasetTemplate/code_description.xlsx
resources/DatasetTemplate/code_parameters.xlsx
resources/DatasetTemplate/dataset_description.xlsx
resources/DatasetTemplate/manifest.xlsx
resources/DatasetTemplate/performances.xlsx
resources/DatasetTemplate/resources.xlsx
resources/DatasetTemplate/samples.xlsx
resources/DatasetTemplate/subjects.xlsx
resources/DatasetTemplate/submission.xlsx
resources/filesystem/etc/conf.d/sparcur-dashboard
resources/filesystem/etc/init.d/sparcron-server
resources/filesystem/etc/init.d/sparcur-dashboard
resources/filesystem/etc/nginx/nginx.conf
resources/filesystem/etc/nginx/sparc.conf
sparcur/__init__.py
sparcur/auth-config.py
sparcur/backends.py
sparcur/cli.py
sparcur/config.py
sparcur/converters.py
sparcur/core.py
sparcur/curation.py
sparcur/dashboard_server.py
sparcur/datasets.py
sparcur/datasources.py
sparcur/derives.py
sparcur/exceptions.py
sparcur/mapping.py
sparcur/metastore.py
sparcur/monkey.py
sparcur/normalization.py
sparcur/paths.py
sparcur/pennsieve_api.py
sparcur/pipelines.py
sparcur/protocols.py
sparcur/raw_json.py
sparcur/reports.py
sparcur/schemas.py
sparcur/server.py
sparcur/sheets.py
sparcur/state.py
sparcur/utils.py
sparcur.egg-info/PKG-INFO
sparcur.egg-info/SOURCES.txt
sparcur.egg-info/dependency_links.txt
sparcur.egg-info/entry_points.txt
sparcur.egg-info/requires.txt
sparcur.egg-info/top_level.txt
sparcur/export/__init__.py
sparcur/export/core.py
sparcur/export/disco.py
sparcur/export/published.py
sparcur/export/reprotcur.py
sparcur/export/triples.py
sparcur/export/xml.py
sparcur/extract/__init__.py
sparcur/extract/xml.py
sparcur/simple/__init__.py
sparcur/simple/clean_metadata_files.py
sparcur/simple/clone.py
sparcur/simple/combine.py
sparcur/simple/compact.py
sparcur/simple/disco.py
sparcur/simple/export.py
sparcur/simple/extract.py
sparcur/simple/fetch.py
sparcur/simple/fetch_annotations.py
sparcur/simple/fetch_file.py
sparcur/simple/fetch_files.py
sparcur/simple/fetch_metadata_files.py
sparcur/simple/fetch_remote_metadata.py
sparcur/simple/fetch_remote_metadata_all.py
sparcur/simple/fetch_secondary.py
sparcur/simple/path_data.py
sparcur/simple/path_metadata.py
sparcur/simple/path_metadata_validate.py
sparcur/simple/pull.py
sparcur/simple/retrieve.py
sparcur/simple/transform.py
sparcur/simple/utils.py
sparcur/simple/validate.py
sparcur/sparcron/__init__.py
sparcur/sparcron/__main__.py
sparcur/sparcron/core.py
sparcur/sparcron/endpoints.py
sparcur/sparcron/server.py
sparcur/sparcron/status.py
sparcur_internal/dandittl.py
sparcur_internal/github_integration.py
sparcur_internal/sparc-to-uberon.py
sparcur_internal/sparcur/README.org
sparcur_internal/sparcur/info.rkt
sparcur_internal/sparcur/viewer.rkt
sparcur_internal/test_data/test_data.py
test/__init__.py
test/common.py
test/test_backends.py
test/test_core.py
test/test_cron.py
test/test_dataset.py
test/test_delete.py
test/test_derives.py
test/test_embedded_metadata.py
test/test_integration.py
test/test_normalize.py
test/test_pipelines.py
test/test_schemas.py
test/test_summary.py
test/test_utils.py
test/test_validate.py
test/examples/dd-no-sub-no-samp.csv
test/examples/dd-pie.csv
test/examples/mbf-example.xml
test/examples/sa-pie.csv
test/examples/sm-ot.csv
test/examples/su-cry.csv
test/examples/su-pie.csv
test/examples/submission-data-in-definition.csv
test/examples/submission-matched-alt-header.csv
test/examples/submission-multi-column-extra-row.csv
test/examples/submission-multi-row-error-no-values.csv
test/examples/dataset-bad/perf-oops-top/manifest.csv
test/examples/dataset-bad/samp-oops-im-at-the-top-level/manifest.json
test/examples/dataset-bad/sub-oop-top-level/manifest.xlsx
test/examples/manifest/abi-scaffold.csv
test/simple/test_utils.py