from ._basic import (
    make_fragment_file,
    import_data,
    add_tile_matrix,
    make_peak_matrix,
    filter_cells,
    select_features,
    make_gene_matrix,
)
from ._knn import knn
from ._mnn_correct import mnc_correct
from ._scrublet import scrublet, call_doublets
from ._harmony import harmony