Metadata-Version: 2.1
Name: smmuty
Version: 0.0.2
Summary: utilities for single-cell multi-omics data
Home-page: https://github.com/beyondpie/smmtools/inst
Author: Songpeng Zu
Author-email: szu@health.ucsd.edu
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
Requires-Dist: leidenalg
Requires-Dist: numpy
Requires-Dist: scrublet
Requires-Dist: sklearn
Requires-Dist: igraph
Requires-Dist: pysam
Requires-Dist: scipy
Requires-Dist: matplotlib
Requires-Dist: fastcluster

# Single-cell multi-omics related utilities
This package is specifically designed to the R package: [smmtools](https://github.com/beyondpie/smmtools).

It includes:
- Doublet removement with Scrublet
- Clustering with Leiden algorithm and the corresponding measurements
- Some functions related with [SnapTools](https://github.com/r3fang/SnapTools) to handle Snap files.


