AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
pyproject.toml
requirements.txt
setup.cfg
setup.py
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/readme.rst
docs/usage.rst
smiter/.pyre_configuration
smiter/__init__.py
smiter/cli.py
smiter/fragmentation_functions.py
smiter/lib.py
smiter/noise_functions.py
smiter/peak_distribution.py
smiter/synthetic_mzml.py
smiter/synthetic_mzml.py.bck
smiter/todos.md
smiter.egg-info/PKG-INFO
smiter.egg-info/SOURCES.txt
smiter.egg-info/dependency_links.txt
smiter.egg-info/entry_points.txt
smiter.egg-info/not-zip-safe
smiter.egg-info/requires.txt
smiter.egg-info/top_level.txt
smiter/ext/__init__.py
smiter/ext/get_modomics_csv.sh
smiter/ext/modomics.csv
smiter/ext/nucleoside_fragment_kb.py
smiter/ext/test.csv
smiter/ext/trim_lines.py
smiter/params/default_params.py
smiter/params/header_param.py
tests/__init__.py
tests/test_fragmentation.py
tests/test_lib.py
tests/test_noise_injection.py
tests/test_peak_distribution.py
tests/test_smiter_cli.py
tests/test_synthetic_mzml.py
tests/data/molecules_test.csv