.gitignore
.travis.yml
LICENSE
MANIFEST.in
Makefile
README.md
README.rst
logo_300px.png
requirements.txt
setup.cfg
setup.py
tox.ini
docs/Makefile
docs/algorithms.rst
docs/conf.py
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/requirements.txt
docs/smetana.rst
docs/usage.rst
scripts/smetana
smetana/__init__.py
smetana/interface.py
smetana/legacy.py
smetana/smetana.py
smetana.egg-info/PKG-INFO
smetana.egg-info/SOURCES.txt
smetana.egg-info/dependency_links.txt
smetana.egg-info/not-zip-safe
smetana.egg-info/requires.txt
smetana.egg-info/top_level.txt
tests/__init__.py
tests/test_smetana.py
tests/data/communities.tsv
tests/data/ec_glc_ko.xml
tests/data/ec_nh4_ko.xml
tests/data/inorganic.txt
tests/data/media_db.tsv
tests/output/test_detailed.tsv
tests/output/test_global.tsv