.coveragerc
.gitignore
.pre-commit-config.yaml
.style.yapf
.yapfignore
LICENSE
MANIFEST.in
Makefile
README.md
config.json
pyproject.toml
release-latest.md
.github/workflows/build-docs.yml
.github/workflows/deploy-docs.yml
.github/workflows/make-release.yml
.github/workflows/test.yml
benchmarks/.gitattributes
benchmarks/bench_skan.py
benchmarks/infected3.npz
doc/Makefile
doc/conf.py
doc/index.rst
doc/make.bat
doc/publications.bib
doc/_images/junctions-pre-0-11.png
doc/_static/gui-screenshot.png
doc/_static/version_switcher.json
doc/api/api.rst
doc/api/skan.csr.rst
doc/api/skan.draw.rst
doc/api/skan.pipe.rst
doc/api/skan.pre.rst
doc/example-data/inf1.tif
doc/example-data/inf2.tif
doc/example-data/neuron.zarr.zip
doc/example-data/rbc1.tif
doc/example-data/rbc2.tif
doc/examples/complete_analysis.md
doc/examples/index.rst
doc/examples/sholl_analysis.md
doc/examples/skeletonize_horse.py
doc/examples/visualizing_3d_skeletons.md
doc/getting_started/getting_started.md
doc/getting_started/index.rst
doc/getting_started/install.rst
doc/misc/citing.rst
doc/misc/faq.md
doc/misc/index.rst
doc/misc/release-notes/index.rst
doc/misc/release-notes/release-v0.10.0.md
doc/misc/release-notes/release-v0.11.md
doc/misc/release-notes/release-v0.12.md
doc/misc/release-notes/release-v0.13.md
doc/misc/release-notes/release-v0.9.md
src/skan/__init__.py
src/skan/_testdata.py
src/skan/_version.py
src/skan/csr.py
src/skan/draw.py
src/skan/image_stats.py
src/skan/io.py
src/skan/napari.yaml
src/skan/napari_skan.py
src/skan/nputil.py
src/skan/pipe.py
src/skan/pre.py
src/skan/summary_utils.py
src/skan.egg-info/PKG-INFO
src/skan.egg-info/SOURCES.txt
src/skan.egg-info/dependency_links.txt
src/skan.egg-info/entry_points.txt
src/skan.egg-info/requires.txt
src/skan.egg-info/top_level.txt
src/skan/test/__init__.py
src/skan/test/test_csr.py
src/skan/test/test_draw.py
src/skan/test/test_io.py
src/skan/test/test_napari_plugin.py
src/skan/test/test_pipe.py
src/skan/test/test_pre.py
src/skan/test/test_prune.py
src/skan/test/test_skeleton_class.py
src/skan/test/test_summary_utils.py
src/skan/test/data/retic.tif
src/skan/test/data/skeleton.tif