CREDITS.rst
INSTALL.rst
MANIFEST.in
README.rst
setup.py
doc/Makefile
doc/source/conf.py
doc/source/credits.rst
doc/source/index.rst
doc/source/install.rst
doc/source/roi_buddy.rst
doc/source/tutorial.rst
doc/source/_templates/layout.html
doc/source/api/datasets.rst
doc/source/api/extract.rst
doc/source/api/index.rst
doc/source/api/motion.rst
doc/source/api/rois.rst
doc/source/api/segment.rst
doc/source/roi_buddy/File_Menu.csv
doc/source/roi_buddy/control_panel.csv
doc/source/roi_buddy/control_panel_initialize_sets.csv
doc/source/roi_buddy/control_panel_modes.csv
doc/source/roi_buddy/control_panel_registration.csv
doc/source/roi_buddy/control_panel_view_rois.csv
doc/source/roi_buddy/main_panel.jpg
doc/source/roi_buddy/overview.jpg
sima/ROI.py
sima/__init__.py
sima/_motion.c
sima/_opca.c
sima/extract.py
sima/imaging.py
sima/imaging_parameters.py
sima/iterables.py
sima/motion.py
sima/normcut.py
sima/oPCA.py
sima/segment.py
sima.egg-info/PKG-INFO
sima.egg-info/SOURCES.txt
sima.egg-info/dependency_links.txt
sima.egg-info/requires.txt
sima.egg-info/top_level.txt
sima/misc/__init__.py
sima/misc/imagej.py
sima/misc/tifffile.py
sima/tests/test_ROI.py
sima/tests/test_extract.py
sima/tests/test_imaging.py
sima/tests/test_iterables.py
sima/tests/test_motion.py
sima/tests/test_normcut.py
sima/tests/test_oPCA.py
sima/tests/test_segment.py
sima/tests/data/example.h5
sima/tests/data/example.tif
sima/tests/data/imageJ_ROIs.zip
sima/tests/data/example.sima/dataset.pkl
sima/tests/data/example.sima/displacements.pkl