MANIFEST.in
README.md
setup.py
SigProfilerExtractor/PlotDecomposition.py
SigProfilerExtractor/PlotDecomposition_DBS78.py
SigProfilerExtractor/PlotDecomposition_ID83.py
SigProfilerExtractor/PlotDecomposition_SBS1536.py
SigProfilerExtractor/PlotDecomposition_SBS288.py
SigProfilerExtractor/PlotDecomposition_SBS96.py
SigProfilerExtractor/SigProfilerPlottingMatrix.py
SigProfilerExtractor/__init__.py
SigProfilerExtractor/decomposition.py
SigProfilerExtractor/estimate_best_solution.py
SigProfilerExtractor/nmf_cpu.py
SigProfilerExtractor/nmf_gpu.py
SigProfilerExtractor/plotActivity.py
SigProfilerExtractor/sigpro.py
SigProfilerExtractor/single_sample.py
SigProfilerExtractor/subroutines.py
SigProfilerExtractor/tmbplot.py
SigProfilerExtractor/version.py
SigProfilerExtractor.egg-info/PKG-INFO
SigProfilerExtractor.egg-info/SOURCES.txt
SigProfilerExtractor.egg-info/dependency_links.txt
SigProfilerExtractor.egg-info/not-zip-safe
SigProfilerExtractor.egg-info/requires.txt
SigProfilerExtractor.egg-info/top_level.txt
SigProfilerExtractor/data/.DS_Store
SigProfilerExtractor/data/21_breast_WGS_substitutions.mat
SigProfilerExtractor/data/Accolade_fermante.png
SigProfilerExtractor/data/CNV_signatures.txt
SigProfilerExtractor/data/DBS_signatures_genome_builds.xlsx
SigProfilerExtractor/data/SBS_signatures_genome_builds.xlsx
SigProfilerExtractor/data/Samples.txt
SigProfilerExtractor/data/csvexample.csv
SigProfilerExtractor/data/sigProfiler_DBS_signatures.csv
SigProfilerExtractor/data/sigProfiler_ID_signatures.csv
SigProfilerExtractor/data/sigProfiler_SBS_signatures_2018_03_28.csv
SigProfilerExtractor/data/vcftest/.DS_Store
SigProfilerExtractor/data/vcftest/PD3851a.vcf
SigProfilerExtractor/data/vcftest/PD3890a.vcf
SigProfilerExtractor/data/vcftest/PD3904a.vcf
SigProfilerExtractor/data/vcftest/PD3905a.vcf
SigProfilerExtractor/data/vcftest/PD3945a.vcf
SigProfilerExtractor/data/vcftest/PD4005a.vcf
SigProfilerExtractor/data/vcftest/PD4006a.vcf
SigProfilerExtractor/data/vcftest/PD4085a.vcf
SigProfilerExtractor/data/vcftest/PD4086a.vcf
SigProfilerExtractor/data/vcftest/PD4088a.vcf
SigProfilerExtractor/data/vcftest/PD4103a.vcf
SigProfilerExtractor/data/vcftest/PD4107a.vcf
SigProfilerExtractor/data/vcftest/PD4109a.vcf
SigProfilerExtractor/data/vcftest/PD4115a.vcf
SigProfilerExtractor/data/vcftest/PD4116a.vcf
SigProfilerExtractor/data/vcftest/PD4120a.vcf
SigProfilerExtractor/data/vcftest/PD4192a.vcf
SigProfilerExtractor/data/vcftest/PD4194a.vcf
SigProfilerExtractor/data/vcftest/PD4198a.vcf
SigProfilerExtractor/data/vcftest/PD4199a.vcf
SigProfilerExtractor/data/vcftest/PD4248a.vcf
SigProfilerExtractor/src/.DS_Store
SigProfilerExtractor/src/Accolade_fermante.png
SigProfilerExtractor/src/CREDIT.md
SigProfilerExtractor/src/Fonts/Arial Bold.ttf
SigProfilerExtractor/src/FormatFiles/Sample_Files.DBS1248.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.DBS186.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.DBS2976.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.DBS78.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.ID28.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.ID415.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.ID83.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS1536.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS24.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS384.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS6.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS6144.all
SigProfilerExtractor/src/FormatFiles/Sample_Files.SBS96.all