README.md
setup.py
signatureanalyzer/__init__.py
signatureanalyzer/__main__.py
signatureanalyzer/bnmf.py
signatureanalyzer/consensus.py
signatureanalyzer/signatureanalyzer.py
signatureanalyzer/spectra.py
signatureanalyzer/utils.py
signatureanalyzer.egg-info/PKG-INFO
signatureanalyzer.egg-info/SOURCES.txt
signatureanalyzer.egg-info/dependency_links.txt
signatureanalyzer.egg-info/entry_points.txt
signatureanalyzer.egg-info/requires.txt
signatureanalyzer.egg-info/top_level.txt
signatureanalyzer/pathways/__init__.py
signatureanalyzer/pathways/_gsea.py
signatureanalyzer/plotting/__init__.py
signatureanalyzer/plotting/_cosine.py
signatureanalyzer/plotting/_muts.py
signatureanalyzer/plotting/_nmf.py
signatureanalyzer/plotting/_rna.py
signatureanalyzer/plotting/_utils.py
signatureanalyzer/ref/cosmic_v2/sa_cosmic2.tsv
signatureanalyzer/ref/cosmic_v3/sa_cosmic3_dbs.tsv
signatureanalyzer/ref/cosmic_v3/sa_cosmic3_sbs.tsv
signatureanalyzer/ref/cosmic_v3/sa_cosmic3_sbs_exome.tsv
signatureanalyzer/ref/cosmic_v3/sa_cosmic3_sbs_t.tsv
signatureanalyzer/signatureanalyzer_gpu/ARD_NMF.py
signatureanalyzer/signatureanalyzer_gpu/NMF_functions.py
signatureanalyzer/signatureanalyzer_gpu/SignatureAnalyzer-GPU.py
signatureanalyzer/signatureanalyzer_gpu/__init__.py