Metadata-Version: 2.1
Name: shapeout
Version: 1.0.10
Summary: User interface for real-time deformability cytometry (RT-DC)
Home-page: https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut
Author: Paul Müller
Author-email: dev@craban.de
License: GPL v2
Keywords: RT-DC,deformability,cytometry,zellmechanik
Platform: ALL
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2.7
Classifier: Intended Audience :: Science/Research
Requires-Dist: appdirs
Requires-Dist: dclab[all] (>=0.25.0)
Requires-Dist: fcswrite (>=0.5.0)
Requires-Dist: h5py (>=2.8.0)
Requires-Dist: imageio (<2.5.0,>=2.3.0)
Requires-Dist: nptdms (>=0.23.0)
Requires-Dist: numpy (>=1.9.0)
Requires-Dist: pathlib
Requires-Dist: pyper
Requires-Dist: scipy (>=0.13.0)
Provides-Extra: gui
Requires-Dist: chaco ; extra == 'gui'
Requires-Dist: simplejson ; extra == 'gui'
Requires-Dist: wxPython (<4.0.0,>=3.0.0) ; extra == 'gui'
Requires-Dist: kiwisolver ; extra == 'gui'
Requires-Dist: reportlab ; extra == 'gui'
Provides-Extra: test
Requires-Dist: pytest (<5.0) ; extra == 'test'
Requires-Dist: urllib3 ; extra == 'test'
Requires-Dist: configparser (==3.5) ; extra == 'test'
Requires-Dist: zipp (==0.5) ; extra == 'test'
Requires-Dist: pyparsing (==2.4.6) ; extra == 'test'

|Shape-Out|
===========

|PyPI Version| |Build Status Linux| |Build Status Win| |Coverage Status| |Docs Status|


Shape-Out is a graphical user interface for the analysis
and visualization of RT-DC data sets. For more information please visit
https://zellmechanik.com/.


**Please consider migrating your analysis pipeline to**
`Shape-Out 2 <https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut2>`__.
**The differences between Shape-Out 1 and Shape-Out 2 are discussed**
`in the Shape-Out 2 docs <https://shapeout2.readthedocs.io/en/stable/sec_interface.html#differences-to-shape-out-1>`__.


Documentation
-------------
The documentation is available at https://shapeout.readthedocs.io.


Installation
------------
Installers for Shape-Out are available at the `release page <https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut/releases>`__.


Citing Shape-Out
----------------
Please cite Shape-Out either in-line

::

  (...) using the analysis software Shape-Out version X.X.X (available at
  https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut).

or in a bibliography

::

  Paul Müller and others (2015), Shape-Out version X.X.X: Analysis software
  for real-time deformability cytometry [Software]. Available at
  https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut.

and replace ``X.X.X`` with the version of Shape-Out that you used.


Development
-----------
Details on running Shape-Out from source, contributing, testing, and releasing new versions
of Shape-Out can be found at https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut/tree/develop/DEVELOP.rst.



.. |Shape-Out| image:: https://raw.github.com/ZELLMECHANIK-DRESDEN/ShapeOut/master/shapeout/img/shapeout_logotype_h50.png
.. |PyPI Version| image:: https://img.shields.io/pypi/v/ShapeOut.svg
   :target: https://pypi.python.org/pypi/shapeout
.. |Build Status Linux| image:: https://img.shields.io/travis/ZELLMECHANIK-DRESDEN/ShapeOut.svg?label=tests_linux
   :target: https://travis-ci.org/ZELLMECHANIK-DRESDEN/ShapeOut
.. |Build Status Win| image:: https://img.shields.io/appveyor/ci/paulmueller/ShapeOut/master.svg?label=build_win
   :target: https://ci.appveyor.com/project/paulmueller/ShapeOut
.. |Coverage Status| image:: https://img.shields.io/codecov/c/github/ZELLMECHANIK-DRESDEN/ShapeOut/master.svg
   :target: https://codecov.io/gh/ZELLMECHANIK-DRESDEN/ShapeOut
.. |Docs Status| image:: https://readthedocs.org/projects/shapeout/badge/?version=develop
   :target: https://readthedocs.org/projects/shapeout/builds/


