# SPDX-License-Identifier: GNU GPL v3

"""
A group of algorithms and functions for Graph Theory analysis on microscopy images.
"""

# MODULES
from .apps.lib_app import ExpressGT
from .compute.graph_analyzer import GraphAnalyzer
from .imaging.base_image import BaseImage
from .imaging.image_processor import (
    ImageProcessor,
    ALLOWED_IMG_EXTENSIONS,
    ALLOWED_GRAPH_FILE_EXTENSIONS
)
from .models.filter_env import FilterSearchSpace
from .models.mdp_env import SGTGraphEnv
from .models.filter_env import (
    sgt_genetic_algorithm,
    sgt_hill_climbing_algorithm
)
from .networks.fiber_network import FiberNetworkBuilder
from .networks.graph_skeleton import GraphSkeleton
from .utils.sgt_utils import (
    gsd_to_skeleton,
    csv_to_graph,
    write_gsd_file
)
from .utils.config_loader import (
    load_gtc_configs,
    load_gte_configs,
    load_img_configs
)

__all__ = [
    "ExpressGT",
    "BaseImage",
    "GraphAnalyzer",
    "ImageProcessor",
    "ALLOWED_IMG_EXTENSIONS",
    "ALLOWED_GRAPH_FILE_EXTENSIONS",
    "FiberNetworkBuilder",
    "GraphSkeleton",
    "FilterSearchSpace",
    "SGTGraphEnv",
    "load_gtc_configs",
    "load_gte_configs",
    "load_img_configs",
    "gsd_to_skeleton",
    "csv_to_graph",
    "write_gsd_file",
    "sgt_genetic_algorithm",
    "sgt_hill_climbing_algorithm"
]
