Metadata-Version: 2.1
Name: sequdas-qc
Version: 1.0.1
Summary: Sequence Upload and Data Archiving System
Home-page: https://github.com/duanjunhyq/sequdas_qc
Author: Jun Duan
Author-email: jun.duan@bccdc.ca
License: MIT
Keywords: NGS sequence archive analysis
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
Requires-Dist: configparser
Requires-Dist: mysql-connector-python
Requires-Dist: pytz
Requires-Dist: ntplib
Requires-Dist: validate-email

# SeqUDAS Quality Control Analysis Component

## Setting up a Development Environment

A conda `environment.yml` file is provided in this repository. It can be used to set up a conda environment as follows:

```
conda env create -f environment.yml
```

Once the environment has been create, activate it:

```
conda activate sequdas-qc
```

...then install the `sequdas_qc` codebase into the environment in 'editable' mode

```
pip install --editable .
```

You can verify that `sequdas-qc` is available on the `$PATH` by invoking the help output as follows:

```
sequdas-qc -h
```


