from .dot_parser import DOTParser  # noqa: F401
from .file_factory import FastQFactory, FileFactory  # noqa: F401
from .module import Pipeline, modules, pipeline_names  # noqa: F401
from .module_finder import ModuleFinder  # noqa: F401
from .pipeline_manager import (  # noqa: F401
    PipelineManager,
    PipelineManagerDirectory,
    get_run,
    get_shell,
)
from .pipeline_utils import (  # noqa: F401
    Makefile,
    OnSuccessCleaner,
    get_pipeline_statistics,
    message,
)
from .sequana_config import SequanaConfig  # noqa: F401
