typer
scanpy
spatialdata
joblib
geopandas
igraph
rtree
rasterio
squidpy
tqdm
anndata==0.11.4

[docs]
sphinx
sphinx-book-theme
myst-parser
nbsphinx
sphinx-autodoc-typehints
sphinx-copybutton
pandoc

[test]
coverage
pytest
ruff
ty
ipdb
black[jupyter]
pytest-cov
