README.md
setup.py
segbook/__init__.py
segbook/predict.py
segbook/segbook.py
segbook/utils.py
segbook.egg-info/PKG-INFO
segbook.egg-info/SOURCES.txt
segbook.egg-info/dependency_links.txt
segbook.egg-info/entry_points.txt
segbook.egg-info/requires.txt
segbook.egg-info/top_level.txt
segbook/nnunet/__init__.py
segbook/nnunet/configuration.py
segbook/nnunet/paths.py
segbook/nnunet/evaluation/__init__.py
segbook/nnunet/evaluation/add_dummy_task_with_mean_over_all_tasks.py
segbook/nnunet/evaluation/add_mean_dice_to_json.py
segbook/nnunet/evaluation/collect_results_files.py
segbook/nnunet/evaluation/evaluator.py
segbook/nnunet/evaluation/metrics.py
segbook/nnunet/evaluation/region_based_evaluation.py
segbook/nnunet/evaluation/surface_dice.py
segbook/nnunet/inference/__init__.py
segbook/nnunet/inference/change_trainer.py
segbook/nnunet/inference/ensemble_predictions.py
segbook/nnunet/inference/predict.py
segbook/nnunet/inference/predict_simple.py
segbook/nnunet/inference/segmentation_export.py
segbook/nnunet/inference/amos2022/__init__.py
segbook/nnunet/inference/amos2022/inference_code.py
segbook/nnunet/inference/pretrained_models/__init__.py
segbook/nnunet/inference/pretrained_models/collect_pretrained_models.py
segbook/nnunet/inference/pretrained_models/download_pretrained_model.py
segbook/nnunet/network_architecture/STUNet.py
segbook/nnunet/network_architecture/__init__.py
segbook/nnunet/network_architecture/generic_UNet.py
segbook/nnunet/network_architecture/initialization.py
segbook/nnunet/network_architecture/neural_network.py
segbook/nnunet/postprocessing/__init__.py
segbook/nnunet/postprocessing/connected_components.py
segbook/nnunet/preprocessing/__init__.py
segbook/nnunet/preprocessing/cropping.py
segbook/nnunet/preprocessing/preprocessing.py
segbook/nnunet/training/__init__.py
segbook/nnunet/training/model_restore.py
segbook/nnunet/training/cascade_stuff/__init__.py
segbook/nnunet/training/cascade_stuff/predict_next_stage.py
segbook/nnunet/training/data_augmentation/__init__.py
segbook/nnunet/training/data_augmentation/custom_transforms.py
segbook/nnunet/training/data_augmentation/data_augmentation_moreDA.py
segbook/nnunet/training/data_augmentation/default_data_augmentation.py
segbook/nnunet/training/data_augmentation/downsampling.py
segbook/nnunet/training/data_augmentation/pyramid_augmentations.py
segbook/nnunet/training/dataloading/__init__.py
segbook/nnunet/training/dataloading/dataset_loading.py
segbook/nnunet/training/learning_rate/__init__.py
segbook/nnunet/training/learning_rate/poly_lr.py
segbook/nnunet/training/loss_functions/TopK_loss.py
segbook/nnunet/training/loss_functions/__init__.py
segbook/nnunet/training/loss_functions/crossentropy.py
segbook/nnunet/training/loss_functions/deep_supervision.py
segbook/nnunet/training/loss_functions/dice_loss.py
segbook/nnunet/training/loss_functions/focal_loss.py
segbook/nnunet/training/network_training/STUNetTrainer.py
segbook/nnunet/training/network_training/__init__.py
segbook/nnunet/training/network_training/network_trainer.py
segbook/nnunet/training/network_training/nnUNetTrainer.py
segbook/nnunet/training/network_training/nnUNetTrainerV2.py
segbook/nnunet/training/optimizer/__init__.py
segbook/nnunet/training/optimizer/ranger.py
segbook/nnunet/utilities/__init__.py
segbook/nnunet/utilities/distributed.py
segbook/nnunet/utilities/file_conversions.py
segbook/nnunet/utilities/file_endings.py
segbook/nnunet/utilities/folder_names.py
segbook/nnunet/utilities/image_reorientation.py
segbook/nnunet/utilities/nd_softmax.py
segbook/nnunet/utilities/one_hot_encoding.py
segbook/nnunet/utilities/overlay_plots.py
segbook/nnunet/utilities/random_stuff.py
segbook/nnunet/utilities/recursive_delete_npz.py
segbook/nnunet/utilities/recursive_rename_taskXX_to_taskXXX.py
segbook/nnunet/utilities/set_n_proc_DA.py
segbook/nnunet/utilities/sitk_stuff.py
segbook/nnunet/utilities/task_name_id_conversion.py
segbook/nnunet/utilities/tensor_utilities.py
segbook/nnunet/utilities/to_torch.py