CHANGES.rst
CONTRIBUTING.md
LICENSE
MANIFEST.in
Makefile
README.rst
min-requirements.txt
pyproject.toml
requirements.txt
setup.cfg
setup.py
.maint/contributors.json
.maint/developers.json
.maint/former.json
.maint/paper_author_list.py
.maint/update_requirements.py
.maint/update_zenodo.py
sdcflows/__init__.py
sdcflows/_version.py
sdcflows/conftest.py
sdcflows/fieldmaps.py
sdcflows.egg-info/PKG-INFO
sdcflows.egg-info/SOURCES.txt
sdcflows.egg-info/dependency_links.txt
sdcflows.egg-info/requires.txt
sdcflows.egg-info/top_level.txt
sdcflows.egg-info/zip-safe
sdcflows/data/__init__.py
sdcflows/data/affine.json
sdcflows/data/fmap-any_registration.json
sdcflows/data/fmap-any_registration_testing.json
sdcflows/data/fmap_atlas.nii.gz
sdcflows/data/fmap_atlas_2_MNI152NLin2009cAsym_affine.mat
sdcflows/data/sd_syn.json
sdcflows/data/sd_syn_debug.json
sdcflows/data/translation_rigid.json
sdcflows/data/flirtsch/b02b0.cnf
sdcflows/data/flirtsch/b02b0_1.cnf
sdcflows/data/flirtsch/b02b0_2.cnf
sdcflows/data/flirtsch/b02b0_4.cnf
sdcflows/data/flirtsch/b02b0_quick.cnf
sdcflows/interfaces/__init__.py
sdcflows/interfaces/brainmask.py
sdcflows/interfaces/bspline.py
sdcflows/interfaces/epi.py
sdcflows/interfaces/fmap.py
sdcflows/interfaces/reportlets.py
sdcflows/interfaces/utils.py
sdcflows/interfaces/tests/__init__.py
sdcflows/interfaces/tests/test_bspline.py
sdcflows/interfaces/tests/test_fmap.py
sdcflows/interfaces/tests/test_reportlets.py
sdcflows/interfaces/tests/test_utils.py
sdcflows/tests/__init__.py
sdcflows/tests/test_fieldmaps.py
sdcflows/tests/test_version.py
sdcflows/tests/data/epi.nii.gz
sdcflows/tests/data/topup-coeff-fixed.nii.gz
sdcflows/tests/data/topup-coeff.nii.gz
sdcflows/tests/data/topup-field.nii.gz
sdcflows/tests/data/dsA/dataset_description.json
sdcflows/tests/data/dsA/sub-01/anat/sub-01_FLAIR.nii.gz
sdcflows/tests/data/dsA/sub-01/anat/sub-01_T1w.nii.gz
sdcflows/tests/data/dsA/sub-01/anat/sub-01_T2w.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-AP_dwi.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-AP_sbref.json
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-AP_sbref.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-LR_dwi.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-LR_sbref.json
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-LR_sbref.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-PA_dwi.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-PA_sbref.json
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-PA_sbref.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-RL_dwi.nii.gz
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-RL_sbref.json
sdcflows/tests/data/dsA/sub-01/dwi/sub-01_dir-RL_sbref.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_acq-single_dir-PA_epi.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_acq-single_dir-PA_epi.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-AP_epi.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-AP_epi.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-LR_epi.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-LR_epi.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-PA_epi.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-PA_epi.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-RL_epi.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_dir-RL_epi.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_fieldmap.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_fieldmap.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_magnitude.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_magnitude1.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_magnitude2.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phase1.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phase1.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phase2.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phase2.nii.gz
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phasediff.json
sdcflows/tests/data/dsA/sub-01/fmap/sub-01_phasediff.nii.gz
sdcflows/tests/data/dsA/sub-01/func/sub-01_task-rest_bold.nii.gz
sdcflows/tests/data/dsA/sub-01/func/sub-01_task-rest_sbref.nii.gz
sdcflows/utils/__init__.py
sdcflows/utils/bimap.py
sdcflows/utils/epimanip.py
sdcflows/utils/misc.py
sdcflows/utils/phasemanip.py
sdcflows/utils/tools.py
sdcflows/utils/wrangler.py
sdcflows/utils/tests/__init__.py
sdcflows/utils/tests/test_misc.py
sdcflows/utils/tests/test_phasemanip.py
sdcflows/utils/tests/test_tools.py
sdcflows/viz/__init__.py
sdcflows/viz/utils.py
sdcflows/workflows/__init__.py
sdcflows/workflows/ancillary.py
sdcflows/workflows/base.py
sdcflows/workflows/outputs.py
sdcflows/workflows/apply/__init__.py
sdcflows/workflows/apply/correction.py
sdcflows/workflows/apply/registration.py
sdcflows/workflows/apply/tests/__init__.py
sdcflows/workflows/apply/tests/fieldcoeff.nii.gz
sdcflows/workflows/apply/tests/test_correction.py
sdcflows/workflows/apply/tests/test_registration.py
sdcflows/workflows/fit/__init__.py
sdcflows/workflows/fit/fieldmap.py
sdcflows/workflows/fit/pepolar.py
sdcflows/workflows/fit/syn.py
sdcflows/workflows/fit/tests/__init__.py
sdcflows/workflows/fit/tests/test_fit.py
sdcflows/workflows/fit/tests/test_pepolar.py
sdcflows/workflows/fit/tests/test_phdiff.py
sdcflows/workflows/fit/tests/test_syn.py
sdcflows/workflows/tests/__init__.py
sdcflows/workflows/tests/test_ancillary.py
sdcflows/workflows/tests/test_base.py
tools/cache_templateflow.py