from .velocity import velocity, velocity_genes
from .velocity_graph import velocity_graph
from .transition_matrix import transition_matrix
from .velocity_embedding import velocity_embedding
from .velocity_confidence import velocity_confidence, velocity_confidence_transition
from .terminal_states import cell_fate, cell_origin, eigs, terminal_states
from .rank_velocity_genes import velocity_clusters, rank_velocity_genes
from .velocity_pseudotime import velocity_map, velocity_pseudotime
from scanpy.api.tl import tsne, umap, diffmap, dpt, louvain, paga
from .dynamical_model import DynamicsRecovery, recover_dynamics, dynamical_velocity
