"""Tools Module."""

from scphylo.tl.cna import infercna
from scphylo.tl.consensus import consensus, consensus_day
from scphylo.tl.fitch import fitch
from scphylo.tl.partition_function import partition_function
from scphylo.tl.score import ad, caset, cc, disc, dl, gs, mltd, mp3, rf, tpted
from scphylo.tl.solver import (
    bnb,
    booster,
    cardelino,
    cellphy,
    dendro,
    gpps,
    grmt,
    huntress,
    infscite,
    iscistree,
    onconem,
    phiscs_readcount,
    phiscsb,
    phiscsb_bulk,
    phiscsi,
    phiscsi_bulk,
    rscistree,
    sbm,
    scelestial,
    sciphi,
    scistree,
    scite,
    siclonefit,
    sphyr,
)

__all__ = (
    infercna,
    consensus,
    consensus_day,
    partition_function,
    sbm,
    ad,
    cc,
    dl,
    mltd,
    tpted,
    bnb,
    booster,
    cardelino,
    dendro,
    huntress,
    infscite,
    iscistree,
    onconem,
    phiscsi_bulk,
    phiscs_readcount,
    phiscsb,
    phiscsb_bulk,
    phiscsi,
    rscistree,
    scistree,
    scite,
    siclonefit,
    fitch,
    caset,
    disc,
    mp3,
    rf,
    gs,
    sphyr,
    grmt,
    sciphi,
    gpps,
    scelestial,
    cellphy,
)
