Metadata-Version: 2.1
Name: scipion-em
Version: 3.9.0
Summary: This modules contains classes related with EM
Home-page: https://github.com/scipion-em/scipion-em
Author: J.M. De la Rosa Trevin, Roberto Marabini, Grigory Sharov, Josue Gomez Blanco, Pablo Conesa, Yunior Fonseca Reyna
Author-email: delarosatrevin@scilifelab.se, roberto@cnb.csic.es, gsharov@mrc-lmb.cam.ac.uk, josue.gomez-blanco@mcgill.ca, pconesa@cnb.csic.es, fonsecareyna@cnb.csic.es
Keywords: scipion cryoem imageprocessing scipion-3.0
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering
License-File: LICENSE
Requires-Dist: scipion-pyworkflow>=3.4.0
Requires-Dist: biopython==1.81; python_version >= "3.8"
Requires-Dist: tifffile==2023.7.10; python_version == "3.8"
Requires-Dist: tifffile==2023.9.26; python_version >= "3.9"
Requires-Dist: emtable>=0.0.14
Requires-Dist: mrcfile<=1.4.3
Requires-Dist: scipy<=1.10.0; python_version < "3.12"
Requires-Dist: scipy==1.11.2; python_version == "3.12"

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        :alt: License

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        :alt: Supported Python versions

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        :alt: Downloads

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pwem
====

**pwem** is a Python module of Scipion framework for image processing in Electron Microscopy

The entire collection is licensed under the terms of the GNU Public License,
version 3 (GPLv3).

Development
-----------

To install **pwem** for development purposes, one can do:

.. code-block:: bash

    # Create a clean virtual environment
    conda create -n scipion python=3.8
    conda activate
    git clone https://github.com/scipion-em/scipion-em.git
    cd scipion-em
    pip install -e .

Running tests
-------------

.. code-block:: bash

    conda activate scipion
    cd scipion-em
    export SCIPION_DOMAIN="pwem"
    python -m unittest discover

API documentation
-----------------

https://scipion-em.github.io/docs/release-3.0.0/api/pwem/pwem.html
