{{ title }}

Date: {{ date }} Methods compared: {{ n_methods }} Batch key: {{ batch_key }} Cell type key: {{ celltype_key }}
{{ best_method }}
Best Method
{{ "%.3f" | format(best_overall) }}
Overall Score
{{ "%.3f" | format(best_batch) }}
Batch Removal
{{ "%.3f" | format(best_bio) }}
Bio Conservation

Integration Ranking

{{ plot_ranking_bar }}

Metrics Comparison

{{ plot_comparison_table }}
{% if plot_radar %}

Metrics Radar

{{ plot_radar }}
{% endif %} {% if plot_batch_vs_bio %}

Batch Removal vs Bio Conservation

{{ plot_batch_vs_bio }}
{% endif %} {% if umap_img %}

Embedding UMAP Comparison

UMAP comparison
UMAP embeddings colored by {{ color_by }}
{% endif %}