
from .cluster import cluster_cells, cluster_cells, detect_outliers, aggregate_clusters_hmmcopy, aggregate_clusters, compute_umap
from .pca import pca_loadings
from .sorting import sort_cells, sort_clusters
from .binfeat import count_gc, mean_from_bigwig, add_cyto_giemsa_stain
from .genes import read_ensemble_genes_gtf, aggregate_genes
from .concat import ad_concat_cells
from .phylo import prune_leaves, align_cn_tree
from .ranges import create_bins, rebin, rebin_regular, weighted_mean, bin_width_weighted_mean
from .getters import get_obs_data
