thymus data with early timepoint

'./02_FCA_ImmunoP/02_FCA_union_cells/write/A38.v01.th_all'

hsc file

./08_thymus_cell_atlas/write/HTA08.v01.A05.Science_human_hsc.h5ad
./08_thymus_cell_atlas/write/HTA07.A04.v02.hsc_new_combined.h5ad

yadult file

./02_FCA_ImmunoP/04_Reviewers/A42.v01.yadult.h5ad
./02_FCA_ImmunoP/04_Reviewers/A42.v01.yadult_raw.h5ad

candidates

./02_FCA_ImmunoP/04_Reviewers/A42.v01.yadult.h5ad
./02_FCA_ImmunoP/04_Reviewers/A42.v01.yadult_raw.h5ad
find: ‘./08_thymus_cell_atlas/03_Data/work/4b/20e29160f83de99af9673106180c19/STARgenome_STARtmp’: Permission denied
./08_thymus_cell_atlas/write/A42.v01.yadult.h5ad

./08_thymus_cell_atlas/write/HTA08.v01.A02.mouse_merged_annotated.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A04.mouse_jptcaido.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.Science_human_hsc.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A06.Science_human_tcells.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A01.fig1_data.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A01.entire_data_raw_count.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A03.tca_mouse_annotated.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.mouse_total_final_v2.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A03.tca_mouse.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mm_jptca.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.fig1_before_batch.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.fig1_data_epi_updated.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.mouse_total_final.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A03.mouse_TCA_raw_count.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mouse_human_mature_T_merged.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A04.mouse_jp.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.fig1_data_epi_updated.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.jp_mouse_unknown_removed.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.mouse_4w8w24w.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.Science_mouse_total.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mouse_jptcaido.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.DC_separate.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.mouse_raw_count.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mouse_jptca.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A02.ido_annotated.h5ad
./08_thymus_cell_atlas/write/00_final_datasets/HTA08.v01.A06.Science_human_tcells.h5ad
./08_thymus_cell_atlas/write/00_final_datasets/HTA08.v02.A04.Science_mouse_total.h5ad
./08_thymus_cell_atlas/write/00_final_datasets/HTA08.v02.A04.Science_mouse_stromal.h5ad
./08_thymus_cell_atlas/write/00_final_datasets/HTA08.v01.A05.Science_human_fig1.h5ad
./08_thymus_cell_atlas/write/00_final_datasets/HTA08.v01.A05.Science_human_epi.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A04.mouse_jptca.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mouse_jp.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.Science_mouse_stromal.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.Science_human_fig1.h5ad
./08_thymus_cell_atlas/write/HTA08.v02.A04.mouse_total.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.Science_human_epi.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.human_TECs.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A01.entire_data_meta_added.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.fig1_data_anno_finalised.h5ad
./08_thymus_cell_atlas/write/HTA08.v01.A05.fig1_data_vdj_added.h5ad
./18_Pan_fetal/HTA08.v01.A05.Science_human_fig1.h5ad