LICENSE
README.md
setup.py
scdiffeq_analyses/__init__.py
scdiffeq_analyses/__version__.py
scdiffeq_analyses.egg-info/PKG-INFO
scdiffeq_analyses.egg-info/SOURCES.txt
scdiffeq_analyses.egg-info/dependency_links.txt
scdiffeq_analyses.egg-info/top_level.txt
scdiffeq_analyses/_plotting/__init__.py
scdiffeq_analyses/_plotting/_fit_loss.py
scdiffeq_analyses/_plotting/_temporal_cmap.py
scdiffeq_analyses/_plotting/_box_plot/__init__.py
scdiffeq_analyses/_plotting/_box_plot/_box_plot.py
scdiffeq_analyses/_plotting/_box_plot/_foreground_scatter.py
scdiffeq_analyses/_plotting/_box_plot/_styled_box_plot.py
scdiffeq_analyses/_tools/__init__.py
scdiffeq_analyses/_tools/_bin_pseudotime.py
scdiffeq_analyses/_tools/_compute_cytotrace_pseudotime.py
scdiffeq_analyses/_tools/_get_sorted_best_predictions.py
scdiffeq_analyses/_tools/_subset_lineage_adata.py
scdiffeq_analyses/computational_complexity/__init__.py
scdiffeq_analyses/computational_complexity/_experiment_runner.py
scdiffeq_analyses/computational_complexity/_gmm_sampling.py
scdiffeq_analyses/computational_complexity/_map_time.py
scdiffeq_analyses/computational_complexity/_simulation_visualization.py
scdiffeq_analyses/fate_prediction/__init__.py
scdiffeq_analyses/fate_prediction/_model_runner.py
scdiffeq_analyses/fate_prediction/_run_fate_prediction.py
scdiffeq_analyses/fate_prediction/funcs/__init__.py
scdiffeq_analyses/fate_prediction/funcs/_annotate_adata_with_growth_weights.py
scdiffeq_analyses/fate_prediction/funcs/_load_adata.py
scdiffeq_analyses/hp_scan/__init__.py
scdiffeq_analyses/hp_scan/_aggregate_plot_data.py
scdiffeq_analyses/hp_scan/_conditions.py
scdiffeq_analyses/hp_scan/_track_completion.py
scdiffeq_analyses/metrics/__init__.py
scdiffeq_analyses/metrics/_cross_entropy.py
scdiffeq_analyses/metrics/_rowwise_negative_cross_entropy.py
scdiffeq_analyses/parsers/__init__.py
scdiffeq_analyses/parsers/_best_ckpts.py
scdiffeq_analyses/parsers/_list_project_versions.py
scdiffeq_analyses/parsers/_screen_result.py
scdiffeq_analyses/parsers/_screen_results.py
scdiffeq_analyses/parsers/_summarized_ckpt.py
scdiffeq_analyses/parsers/_summarized_loss.py
scdiffeq_analyses/parsers/_version_accuracy.py
scdiffeq_analyses/wandb/__init__.py
scdiffeq_analyses/wandb/_download_run_history.py
scdiffeq_analyses/wandb/_get_best_ckpt.py
scdiffeq_analyses/wandb/_run.py
scdiffeq_analyses/wandb/_run_time.py
scdiffeq_analyses/wandb/_summarize_run_accuracy.py
scdiffeq_analyses/wandb/_summarize_runs.py
scdiffeq_analyses/wandb/_wandb_client.py