# echidna.tools.__init__.py

from .utils import EchidnaConfig, reset_echidna_memory, set_sort_order
from .data import pre_process, build_torch_tensors, filter_low_var_genes
from .train import echidna_train, simulate
from .eval import echidna_clones, sample, echidna_status
from .infer_gd import genes_to_bands, echi_cnv, cnv_results, gene_dosage_effect
from .housekeeping import save_model, load_model, get_learned_params

__all__ = [
    "EchidnaConfig",
    "reset_echidna_memory",
    "set_sort_order",
    "pre_process",
    "build_torch_tensors",
    "filter_low_var_genes",
    "echidna_train",
    "simulate",
    "echidna_clones",
    "echidna_status",
    "sample",
    "genes_to_bands",
    "echi_cnv",
    "cnv_results",
    "gene_dosage_effect",
    "save_model",
    "load_model",
    "get_learned_params",
]