Metadata-Version: 2.1
Name: savnet
Version: 0.4.0rc1
Summary: Python tools for detecting mutations causing splicing changes
Home-page: https://github.com/friend1ws/SAVNet
Author: Yuichi Shiraishi
Author-email: friend1ws@gamil.com
License: GPLv3
Description: # SAVNet
        
        [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)
        [![Build Status](https://travis-ci.org/friend1ws/SAVNet.svg?branch=devel)](https://travis-ci.org/friend1ws/SAVNet)
        
        ## Introduction
        
        SAVNet is a software for extracting splicing associated variants (SAVs) from somatic mutation, splicing junction and intron retention data. This software has been used for large-scale exome-transcriptome sequence analysis:
        
        A comprehensive characterization of cis-acting splicing-associated variants in human cancer, Shiraishi et al., Genome Research, 2018, [[link](https://genome.cshlp.org/content/early/2018/07/16/gr.231951.117)].
        
        ## Documentation
        
        The documentation for SAVNet is available [here](http://savnet.readthedocs.io/en/latest/index.html).
        
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: Unix
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
